RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 TRBV12-3P01733 135 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 DYNLT3P51808 116 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 CRYBA2P53672 197 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 KISS1Q15726 138 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 LINC01554Q52M75 96 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 SPTSSAQ969W0 71 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 TANC2Q9HCD6 1990 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 DNAJC9-AS1A6NH13 148 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 H3BMM0 161 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 WNT9BO14905 357 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 SPINK4O60575 86 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 PATE4P0C8F1 98 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 FUSP35637 526 aaKnown RBP eCLIP3.39□□□□□ -1.87
ZNF560-201ENST00000301480 SUPT4H1P63272 117 aaKnown RBP3.39□□□□□ -1.87
ZNF560-201ENST00000301480 TMEM170BQ5T4T1 132 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 Q6YL49 198 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 ZNRF1Q8ND25 227 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 PFN4Q8NHR9 129 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 DIRC1Q969H9 104 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 UBE2WQ96B02 151 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 FAM218AQ96MZ4 157 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 WFDC6Q9BQY6 131 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 VPS13CQ709C8 3753 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 MALRD1Q5VYJ5 2156 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 ALPK2Q86TB3 2170 aa3.39□□□□□ -1.87
ZNF560-201ENST00000301480 CLPSL1A2RUU4 121 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 FHL1Q13642 323 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 CHCHD1Q96BP2 118 aaKnown RBP3.38□□□□□ -1.87
ZNF560-201ENST00000301480 IL36RNQ9UBH0 155 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 IGKV1D-17A0A075B6S4 117 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 IGKV1-27A0A075B6S5 117 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 LINC01549A6NIU2 74 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 COX7A2P2O60397 106 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 ACYP1P07311 99 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 NPPCP23582 126 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 ZFP36P26651 326 aaKnown RBP3.38□□□□□ -1.87
ZNF560-201ENST00000301480 CRIP2P52943 208 aaPredicted RBP3.38□□□□□ -1.87
ZNF560-201ENST00000301480 UBE2BP63146 152 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 RHOHQ15669 191 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 Q6ZS46 218 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 PDPNQ86YL7 162 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 FAM3DQ96BQ1 224 aa3.38□□□□□ -1.87
ZNF560-201ENST00000301480 TRBV7-1A0A0A6YYK4 115 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 M0R1W7 72 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 PEX7O00628 323 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 XCL1P47992 114 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 FAM229BQ4G0N7 80 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 Q6ZR03 302 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 ODF3L1Q8IXM7 274 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 SMCR5Q8TEV8 140 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 ABHD14BQ96IU4 210 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 XCL2Q9UBD3 114 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 IGHV6-1A0A0B4J1U7 121 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 IGHV1-69DA0A0B4J2H0 117 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 C12orf77C9JDV5 145 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 J3QRE1 110 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 BLCAPP62952 87 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 CHCHD10Q8WYQ3 142 aaPredicted RBP3.37□□□□□ -1.87
ZNF560-201ENST00000301480 Q96M85 177 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 NABP2Q9BQ15 211 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 TTTY13Q9BZ97 58 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 IBA57-AS1B1ANH7 110 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 PIN1P1O15428 100 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 LHBP01229 141 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 IGHV1-69P01742 117 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 RNASE4P34096 147 aaKnown RBP3.37□□□□□ -1.87
ZNF560-201ENST00000301480 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 C20orf197Q8N268 126 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 LHFPL6Q9Y693 200 aa3.37□□□□□ -1.87
ZNF560-201ENST00000301480 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.36□□□□□ -1.87
ZNF560-201ENST00000301480 IGKV1-12A0A0C4DH73 117 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 FAM223BA6NKX1 122 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 M0R135 149 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 IGKV1D-12P01611 117 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 FCER1GP30273 86 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 FGF12P61328 243 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 SDIM1Q6ZPB5 146 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 C1orf147Q96MC9 270 aaPredicted RBP3.36□□□□□ -1.87
ZNF560-201ENST00000301480 HIST1H4GQ99525 98 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 SLC25A2Q9BXI2 301 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 LY96Q9Y6Y9 160 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 A6NN06 94 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 A8MU10 97 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 PPYP01298 95 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 PI3P19957 117 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 NANOS3P60323 173 aaKnown RBP3.36□□□□□ -1.87
ZNF560-201ENST00000301480 DEFB121Q5J5C9 76 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 SLC25A29Q8N8R3 303 aa3.36□□□□□ -1.87
ZNF560-201ENST00000301480 IGKV2D-26A0A0A0MRZ7 120 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 TRAV40A0A0B4J280 105 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 J3QLW9 94 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 TWIST1Q15672 202 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 DEFB112Q30KQ8 113 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
ZNF560-201ENST00000301480 CLEC2BQ92478 149 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 TMEM30CPA0ZSE6 113 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 IGHV4-38-2P0DP08 117 aa3.35□□□□□ -1.87
ZNF560-201ENST00000301480 PROK1P58294 105 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms