RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 FSHBP01225 129 aa9.47□□□□□ -0.89
HIF3A-204ENST00000300862 RBMY1BA6NDE4 496 aaKnown RBP9.47□□□□□ -0.89
HIF3A-204ENST00000300862 RBMY1EA6NEQ0 496 aaKnown RBP9.47□□□□□ -0.89
HIF3A-204ENST00000300862 RBMY1DP0C7P1 496 aaKnown RBP9.47□□□□□ -0.89
HIF3A-204ENST00000300862 TRPT1Q86TN4 253 aaKnown RBP9.47□□□□□ -0.89
HIF3A-204ENST00000300862 NDUFA11Q86Y39 141 aa9.47□□□□□ -0.89
HIF3A-204ENST00000300862 NACAE9PAV3 2078 aa9.47□□□□□ -0.89
HIF3A-204ENST00000300862 A0A0J9YY99 117 aa9.46□□□□□ -0.89
HIF3A-204ENST00000300862 TCL1BO95988 128 aa9.46□□□□□ -0.89
HIF3A-204ENST00000300862 HERVK_113P61574 105 aa9.46□□□□□ -0.89
HIF3A-204ENST00000300862 TMEM61Q8N0U2 210 aa9.46□□□□□ -0.89
HIF3A-204ENST00000300862 NIPBLQ6KC79 2804 aaeCLIP9.46□□□□□ -0.89
HIF3A-204ENST00000300862 TEN1Q86WV5 123 aa9.46□□□□□ -0.9
HIF3A-204ENST00000300862 ITPR3Q14573 2671 aa9.46□□□□□ -0.9
HIF3A-204ENST00000300862 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
HIF3A-204ENST00000300862 TRGV11A0A075B6L2 103 aa9.45□□□□□ -0.9
HIF3A-204ENST00000300862 NBPF19A0A087WUL8 3843 aa9.45□□□□□ -0.9
HIF3A-204ENST00000300862 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
HIF3A-204ENST00000300862 CEMP1Q6PRD7 247 aaPredicted RBP9.45□□□□□ -0.9
HIF3A-204ENST00000300862 SS18L2Q9UHA2 77 aa9.45□□□□□ -0.9
HIF3A-204ENST00000300862 H3BMM0 161 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 NSUN5P1Q3KNT7 163 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 C20orf203Q8NBC4 194 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 Q96MF0 132 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 I3L3M4 83 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 WIPF1O43516 503 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
HIF3A-204ENST00000300862 SBSPONQ8IVN8 264 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 C2CD3Q4AC94 2353 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 JMJD1CQ15652 2540 aa9.44□□□□□ -0.9
HIF3A-204ENST00000300862 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 IGHV3-30P01768 117 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 CFC1P0CG37 223 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 IGHV3-30-5P0DP03 117 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 Q6ZSN1 163 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 RNF152Q8N8N0 203 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 ACANP16112 2415 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 J3QQQ9 107 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 RHOHQ15669 191 aa9.43□□□□□ -0.9
HIF3A-204ENST00000300862 FLNAP21333 2647 aaKnown RBP9.42□□□□□ -0.9
HIF3A-204ENST00000300862 DEFB113Q30KQ7 82 aa9.42□□□□□ -0.9
HIF3A-204ENST00000300862 LYRM7Q5U5X0 104 aa9.42□□□□□ -0.9
HIF3A-204ENST00000300862 ANKRD29Q8N6D5 301 aa9.42□□□□□ -0.9
HIF3A-204ENST00000300862 AMELXQ99217 191 aa9.42□□□□□ -0.9
HIF3A-204ENST00000300862 IGLV4-3A0A075B6K6 122 aa9.42□□□□□ -0.9
HIF3A-204ENST00000300862 LGALS3P17931 250 aaKnown RBP9.42□□□□□ -0.9
HIF3A-204ENST00000300862 ZNF843Q8N446 348 aa9.42□□□□□ -0.9
HIF3A-204ENST00000300862 AKAP9Q99996 3911 aa9.42□□□□□ -0.9
HIF3A-204ENST00000300862 MTORP42345 2549 aa9.41□□□□□ -0.9
HIF3A-204ENST00000300862 C5orf47Q569G3 176 aa9.41□□□□□ -0.9
HIF3A-204ENST00000300862 C10orf126Q8N4M7 172 aa9.41□□□□□ -0.9
HIF3A-204ENST00000300862 RAX2Q96IS3 184 aa9.41□□□□□ -0.9
HIF3A-204ENST00000300862 DYNLRB2Q8TF09 96 aa9.41□□□□□ -0.9
HIF3A-204ENST00000300862 TRBV20-1A0A075B6N2 111 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 A8MWV9 139 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-204ENST00000300862 CD28P10747 220 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 ZNF22P17026 224 aaPredicted RBP9.4□□□□□ -0.9
HIF3A-204ENST00000300862 SLC25A29Q8N8R3 303 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 RNF183Q96D59 192 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 A0A1W2PRX2 142 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 TMEM223A0PJW6 202 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 ADARB2-AS1A8MUL3 147 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 LINC01587Q99440 93 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 ERG28Q9UKR5 140 aa9.4□□□□□ -0.9
HIF3A-204ENST00000300862 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
HIF3A-204ENST00000300862 FAM104AQ969W3 186 aa9.39□□□□□ -0.91
HIF3A-204ENST00000300862 M0R2P5 195 aa9.39□□□□□ -0.91
HIF3A-204ENST00000300862 RHODO00212 210 aa9.39□□□□□ -0.91
HIF3A-204ENST00000300862 PEMTQ9UBM1 199 aa9.39□□□□□ -0.91
HIF3A-204ENST00000300862 M0QXV9 152 aa9.38□□□□□ -0.91
HIF3A-204ENST00000300862 Q8N2B8 174 aa9.38□□□□□ -0.91
HIF3A-204ENST00000300862 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
HIF3A-204ENST00000300862 PRO1854Q9UHT4 67 aa9.38□□□□□ -0.91
HIF3A-204ENST00000300862 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
HIF3A-204ENST00000300862 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
HIF3A-204ENST00000300862 XCL2Q9UBD3 114 aa9.38□□□□□ -0.91
HIF3A-204ENST00000300862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-204ENST00000300862 IGKV2-29A2NJV5 120 aaPredicted RBP9.37□□□□□ -0.91
HIF3A-204ENST00000300862 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
HIF3A-204ENST00000300862 TRAV8-3A0A0A6YYJ7 113 aa9.37□□□□□ -0.91
HIF3A-204ENST00000300862 TRAV2A0A0B4J234 112 aa9.37□□□□□ -0.91
HIF3A-204ENST00000300862 LEPROTO15243 131 aa9.37□□□□□ -0.91
HIF3A-204ENST00000300862 SCGB1C2P0DMR2 95 aa9.36□□□□□ -0.91
HIF3A-204ENST00000300862 ZNF415Q09FC8 603 aa9.36□□□□□ -0.91
HIF3A-204ENST00000300862 HIST2H2BCQ6DN03 193 aa9.36□□□□□ -0.91
HIF3A-204ENST00000300862 KRTAP1-3Q8IUG1 177 aa9.36□□□□□ -0.91
HIF3A-204ENST00000300862 A8MTW9 85 aa9.36□□□□□ -0.91
HIF3A-204ENST00000300862 SLC25A20O43772 301 aa9.36□□□□□ -0.91
HIF3A-204ENST00000300862 C11orf72Q8NBR9 251 aa9.36□□□□□ -0.91
HIF3A-204ENST00000300862 A8MZ25 164 aa9.35□□□□□ -0.91
HIF3A-204ENST00000300862 C9JAW5 83 aa9.35□□□□□ -0.91
HIF3A-204ENST00000300862 H7C2G1 150 aa9.35□□□□□ -0.91
HIF3A-204ENST00000300862 Q6ZSV7 163 aa9.35□□□□□ -0.91
HIF3A-204ENST00000300862 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
HIF3A-204ENST00000300862 ANAPC13Q9BS18 74 aa9.35□□□□□ -0.91
HIF3A-204ENST00000300862 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms