RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 CHD6Q8TD26 2715 aa11.19□□□□□ -0.62
CDH23-202ENST00000299366 TRAV12-1A0A0B4J245 112 aa11.19□□□□□ -0.62
CDH23-202ENST00000299366 LY6LH3BQJ8 138 aa11.19□□□□□ -0.62
CDH23-202ENST00000299366 SRSF2Q01130 221 aaKnown RBP11.19□□□□□ -0.62
CDH23-202ENST00000299366 ZFAND3Q9H8U3 227 aa11.19□□□□□ -0.62
CDH23-202ENST00000299366 DMXL1Q9Y485 3027 aa11.19□□□□□ -0.62
CDH23-202ENST00000299366 A8MZ25 164 aa11.18□□□□□ -0.62
CDH23-202ENST00000299366 CCL24O00175 119 aa11.18□□□□□ -0.62
CDH23-202ENST00000299366 TRAV26-1A0A087WT03 109 aa11.18□□□□□ -0.62
CDH23-202ENST00000299366 ANGP03950 147 aaKnown RBP11.18□□□□□ -0.62
CDH23-202ENST00000299366 INSL3P51460 131 aa11.18□□□□□ -0.62
CDH23-202ENST00000299366 RNF185Q96GF1 192 aa11.18□□□□□ -0.62
CDH23-202ENST00000299366 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
CDH23-202ENST00000299366 EDA2RQ9HAV5 297 aa11.17□□□□□ -0.62
CDH23-202ENST00000299366 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
CDH23-202ENST00000299366 CLEC2BQ92478 149 aa11.17□□□□□ -0.62
CDH23-202ENST00000299366 FBXL19-AS1Q494R0 122 aa11.16□□□□□ -0.62
CDH23-202ENST00000299366 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
CDH23-202ENST00000299366 PRSS47A8MTI9 375 aa11.16□□□□□ -0.62
CDH23-202ENST00000299366 A0A096LNJ9 63 aa11.16□□□□□ -0.62
CDH23-202ENST00000299366 TAL2Q16559 108 aa11.16□□□□□ -0.62
CDH23-202ENST00000299366 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
CDH23-202ENST00000299366 CFAP46Q8IYW2 2715 aa11.15□□□□□ -0.62
CDH23-202ENST00000299366 C15orf53Q8NAA6 179 aa11.15□□□□□ -0.62
CDH23-202ENST00000299366 A0A0J9YX75 114 aa11.15□□□□□ -0.63
CDH23-202ENST00000299366 TOMM6Q96B49 74 aa11.15□□□□□ -0.63
CDH23-202ENST00000299366 E9PLD3 99 aa11.14□□□□□ -0.63
CDH23-202ENST00000299366 WFDC11Q8NEX6 87 aa11.14□□□□□ -0.63
CDH23-202ENST00000299366 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
CDH23-202ENST00000299366 FSTL3O95633 263 aa11.14□□□□□ -0.63
CDH23-202ENST00000299366 UFSP1Q6NVU6 142 aa11.14□□□□□ -0.63
CDH23-202ENST00000299366 SS18Q15532 418 aa11.14□□□□□ -0.63
CDH23-202ENST00000299366 SMIM20Q8N5G0 67 aa11.14□□□□□ -0.63
CDH23-202ENST00000299366 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
CDH23-202ENST00000299366 DAD1P61803 113 aa11.13□□□□□ -0.63
CDH23-202ENST00000299366 ANKRD29Q8N6D5 301 aa11.13□□□□□ -0.63
CDH23-202ENST00000299366 CITED1Q99966 193 aa11.13□□□□□ -0.63
CDH23-202ENST00000299366 Q6ZUT4 128 aa11.12□□□□□ -0.63
CDH23-202ENST00000299366 RAI1Q7Z5J4 1906 aaPredicted RBP11.12□□□□□ -0.63
CDH23-202ENST00000299366 C18orf65Q6ZTR6 163 aa11.12□□□□□ -0.63
CDH23-202ENST00000299366 IGHV3-30-3P0DP02 117 aa11.11□□□□□ -0.63
CDH23-202ENST00000299366 A6NDX4 124 aa11.11□□□□□ -0.63
CDH23-202ENST00000299366 RHOHQ15669 191 aa11.11□□□□□ -0.63
CDH23-202ENST00000299366 AVPP01185 164 aa11.11□□□□□ -0.63
CDH23-202ENST00000299366 C20orf203Q8NBC4 194 aa11.11□□□□□ -0.63
CDH23-202ENST00000299366 CITED2Q99967 270 aaPredicted RBP11.11□□□□□ -0.63
CDH23-202ENST00000299366 H3BUA1 57 aa11.1□□□□□ -0.63
CDH23-202ENST00000299366 CRLF1O75462 422 aa11.1□□□□□ -0.63
CDH23-202ENST00000299366 CRYBA4P53673 196 aa11.1□□□□□ -0.63
CDH23-202ENST00000299366 LAMA5O15230 3695 aa11.1□□□□□ -0.63
CDH23-202ENST00000299366 Q6ZTI0 123 aa11.09□□□□□ -0.63
CDH23-202ENST00000299366 SPANXB1Q9NS25 103 aaPredicted RBP11.09□□□□□ -0.63
CDH23-202ENST00000299366 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
CDH23-202ENST00000299366 GPHB5Q86YW7 130 aa11.09□□□□□ -0.63
CDH23-202ENST00000299366 HIGD1BQ9P298 99 aa11.09□□□□□ -0.63
CDH23-202ENST00000299366 TCL1BO95988 128 aa11.09□□□□□ -0.63
CDH23-202ENST00000299366 HERVK_113P63121 156 aa11.09□□□□□ -0.63
CDH23-202ENST00000299366 HAMPP81172 84 aa11.09□□□□□ -0.63
CDH23-202ENST00000299366 PCSK5Q92824 1860 aa11.08□□□□□ -0.64
CDH23-202ENST00000299366 GYPEP15421 78 aa11.08□□□□□ -0.64
CDH23-202ENST00000299366 DEFB113Q30KQ7 82 aa11.08□□□□□ -0.64
CDH23-202ENST00000299366 LINC01620Q4KN68 170 aa11.08□□□□□ -0.64
CDH23-202ENST00000299366 CDKN2A-AS1Q9UH64 79 aa11.08□□□□□ -0.64
CDH23-202ENST00000299366 C11orf71Q6IPW1 123 aa11.08□□□□□ -0.64
CDH23-202ENST00000299366 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
CDH23-202ENST00000299366 FOXI1Q12951 378 aa11.07□□□□□ -0.64
CDH23-202ENST00000299366 TEN1Q86WV5 123 aa11.07□□□□□ -0.64
CDH23-202ENST00000299366 BAALC-AS2P0C853 105 aa11.07□□□□□ -0.64
CDH23-202ENST00000299366 RNASE3P12724 160 aaKnown RBP11.07□□□□□ -0.64
CDH23-202ENST00000299366 Q9HAA7 133 aa11.07□□□□□ -0.64
CDH23-202ENST00000299366 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
CDH23-202ENST00000299366 CLPSL1A2RUU4 121 aa11.07□□□□□ -0.64
CDH23-202ENST00000299366 NDUFA11Q86Y39 141 aa11.07□□□□□ -0.64
CDH23-202ENST00000299366 TRAV4A0A0B4J268 109 aa11.06□□□□□ -0.64
CDH23-202ENST00000299366 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
CDH23-202ENST00000299366 F8W735 103 aaPredicted RBP11.06□□□□□ -0.64
CDH23-202ENST00000299366 NRACQ8N912 160 aa11.06□□□□□ -0.64
CDH23-202ENST00000299366 ZFHX4Q86UP3 3567 aa11.06□□□□□ -0.64
CDH23-202ENST00000299366 J3QLI3 93 aa11.06□□□□□ -0.64
CDH23-202ENST00000299366 TNFRSF13BO14836 293 aaPredicted RBP11.05□□□□□ -0.64
CDH23-202ENST00000299366 DEFB135Q30KP9 77 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 EBI3Q14213 229 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 NEXN-AS1Q8NBZ9 246 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 TEP1Q99973 2627 aaKnown RBP11.05□□□□□ -0.64
CDH23-202ENST00000299366 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 SND1-IT1Q9HBX3 110 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 HHLA3Q9XRX5 114 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 ICOSQ9Y6W8 199 aa11.05□□□□□ -0.64
CDH23-202ENST00000299366 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
CDH23-202ENST00000299366 ATP5G1P05496 136 aa11.04□□□□□ -0.64
CDH23-202ENST00000299366 MRAPQ8TCY5 172 aa11.04□□□□□ -0.64
CDH23-202ENST00000299366 LINC00467Q9BRT7 94 aa11.04□□□□□ -0.64
CDH23-202ENST00000299366 IGKV3D-7A0A0C4DH55 119 aa11.04□□□□□ -0.64
CDH23-202ENST00000299366 K7EMT4 169 aa11.04□□□□□ -0.64
CDH23-202ENST00000299366 TRAV25A0A0B4J276 109 aa11.03□□□□□ -0.64
CDH23-202ENST00000299366 K7EQG2 157 aa11.03□□□□□ -0.64
CDH23-202ENST00000299366 TEX49A0A1B0GTD5 131 aa11.03□□□□□ -0.64
CDH23-202ENST00000299366 MRPS12O15235 138 aaKnown RBP11.03□□□□□ -0.64
CDH23-202ENST00000299366 Q8N6K4 173 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms