RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 C20orf78Q9BR46 151 aa10.65□□□□□ -0.7
CCDC140-201ENST00000295226 A0A0J9YY99 117 aa10.64□□□□□ -0.71
CCDC140-201ENST00000295226 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
CCDC140-201ENST00000295226 P0DMU3 169 aa10.64□□□□□ -0.71
CCDC140-201ENST00000295226 FAM231AP0DMU4 169 aa10.64□□□□□ -0.71
CCDC140-201ENST00000295226 FAM231CP0DMU5 169 aa10.64□□□□□ -0.71
CCDC140-201ENST00000295226 IGLV2-18A0A075B6J9 118 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 EREGO14944 169 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 ZFP2Q6ZN57 461 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
CCDC140-201ENST00000295226 HHLA3Q9XRX5 114 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 LOC100131303A0A0U1RQF7 123 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 RHODO00212 210 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 ATP5LO75964 103 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 GATA1P15976 413 aaPredicted RBP10.63□□□□□ -0.71
CCDC140-201ENST00000295226 LAGE3Q14657 143 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 SUMO4Q6EEV6 95 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 SLC25A29Q8N8R3 303 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 PMCHL2Q9BQD1 86 aa10.63□□□□□ -0.71
CCDC140-201ENST00000295226 TRAV26-1A0A087WT03 109 aa10.62□□□□□ -0.71
CCDC140-201ENST00000295226 TRAV10A0A0B4J240 114 aa10.61□□□□□ -0.71
CCDC140-201ENST00000295226 CRYBA4P53673 196 aa10.61□□□□□ -0.71
CCDC140-201ENST00000295226 MAJINQ3KP22 176 aa10.61□□□□□ -0.71
CCDC140-201ENST00000295226 ORMDL2Q53FV1 153 aa10.61□□□□□ -0.71
CCDC140-201ENST00000295226 VSIG2Q96IQ7 327 aa10.61□□□□□ -0.71
CCDC140-201ENST00000295226 SMIM2Q9BVW6 85 aa10.61□□□□□ -0.71
CCDC140-201ENST00000295226 CSMD3Q7Z407 3707 aa10.61□□□□□ -0.71
CCDC140-201ENST00000295226 LINC01549A6NIU2 74 aa10.6□□□□□ -0.71
CCDC140-201ENST00000295226 H0Y8G0 127 aa10.6□□□□□ -0.71
CCDC140-201ENST00000295226 G0S2P27469 103 aa10.6□□□□□ -0.71
CCDC140-201ENST00000295226 SUMO2P61956 95 aaKnown RBP10.6□□□□□ -0.71
CCDC140-201ENST00000295226 RPL32P62910 135 aaKnown RBP10.6□□□□□ -0.71
CCDC140-201ENST00000295226 ZFAND6Q6FIF0 208 aa10.6□□□□□ -0.71
CCDC140-201ENST00000295226 SLC25A34Q6PIV7 304 aa10.6□□□□□ -0.71
CCDC140-201ENST00000295226 PAX4O43316 350 aa10.6□□□□□ -0.71
CCDC140-201ENST00000295226 PRO0255Q9UI72 69 aa10.6□□□□□ -0.71
CCDC140-201ENST00000295226 K7EQD1 137 aa10.59□□□□□ -0.71
CCDC140-201ENST00000295226 M0QY20 66 aa10.59□□□□□ -0.71
CCDC140-201ENST00000295226 RPL39LQ96EH5 51 aaKnown RBP10.59□□□□□ -0.71
CCDC140-201ENST00000295226 A0A1B0GV90 55 aa10.58□□□□□ -0.72
CCDC140-201ENST00000295226 hDV102S1A0JD36 115 aa10.58□□□□□ -0.72
CCDC140-201ENST00000295226 IGLL5B9A064 214 aa10.58□□□□□ -0.72
CCDC140-201ENST00000295226 CIDEAO60543 219 aa10.58□□□□□ -0.72
CCDC140-201ENST00000295226 COL5A1-AS1Q5SY13 56 aa10.58□□□□□ -0.72
CCDC140-201ENST00000295226 WWC2-AS2Q96NR7 200 aa10.58□□□□□ -0.72
CCDC140-201ENST00000295226 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 GAGE12JA6NER3 117 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 GYPEP15421 78 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 GAGE1Q13065 139 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 GAGE4Q13068 117 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 GAGE5Q13069 117 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 GAGE13Q4V321 117 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 A0A096LPF7 62 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 NEXN-AS1Q8NBZ9 246 aa10.57□□□□□ -0.72
CCDC140-201ENST00000295226 NUDT3O95989 172 aa10.56□□□□□ -0.72
CCDC140-201ENST00000295226 COX8AP10176 69 aa10.56□□□□□ -0.72
CCDC140-201ENST00000295226 RHOHQ15669 191 aa10.56□□□□□ -0.72
CCDC140-201ENST00000295226 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
CCDC140-201ENST00000295226 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
CCDC140-201ENST00000295226 MUC7Q8TAX7 377 aa10.56□□□□□ -0.72
CCDC140-201ENST00000295226 DEFB104AQ8WTQ1 72 aa10.56□□□□□ -0.72
CCDC140-201ENST00000295226 PRADC1Q9BSG0 188 aa10.56□□□□□ -0.72
CCDC140-201ENST00000295226 DYNC2H1Q8NCM8 4307 aaKnown RBP10.55□□□□□ -0.72
CCDC140-201ENST00000295226 PRSS1P07477 247 aa10.55□□□□□ -0.72
CCDC140-201ENST00000295226 STARD9Q9P2P6 4700 aa10.54□□□□□ -0.72
CCDC140-201ENST00000295226 TRBV6-5A0A0K0K1A5 114 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 DLEU1O43261 78 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 ODF1Q14990 250 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 TENM2Q9NT68 2774 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.53□□□□□ -0.72
CCDC140-201ENST00000295226 H7C1H1 209 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 TCAPO15273 167 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 NEGR1Q7Z3B1 354 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 TOMM6Q96B49 74 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 TNFRSF18Q9Y5U5 241 aa10.53□□□□□ -0.72
CCDC140-201ENST00000295226 TRBV7-3A0A075B6L6 115 aa10.52□□□□□ -0.73
CCDC140-201ENST00000295226 VCYO14598 125 aa10.52□□□□□ -0.73
CCDC140-201ENST00000295226 DPM2O94777 84 aa10.52□□□□□ -0.73
CCDC140-201ENST00000295226 BATFQ16520 125 aa10.52□□□□□ -0.73
CCDC140-201ENST00000295226 TRBV10-1A0A0K0K1A3 114 aa10.51□□□□□ -0.73
CCDC140-201ENST00000295226 NUPR2A6NF83 97 aa10.51□□□□□ -0.73
CCDC140-201ENST00000295226 SIVA1O15304 175 aa10.51□□□□□ -0.73
CCDC140-201ENST00000295226 IGKCP01834 107 aa10.51□□□□□ -0.73
CCDC140-201ENST00000295226 RPL36AP83881 106 aaKnown RBP10.51□□□□□ -0.73
CCDC140-201ENST00000295226 RPL36ALQ969Q0 106 aaKnown RBP10.51□□□□□ -0.73
CCDC140-201ENST00000295226 ICOSQ9Y6W8 199 aa10.51□□□□□ -0.73
CCDC140-201ENST00000295226 A0A087WX48 190 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 H3BNG1 76 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 LINC00694P0DN24 101 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 PLNP26678 52 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 POLR2KP53803 58 aaKnown RBP10.5□□□□□ -0.73
CCDC140-201ENST00000295226 UBE2D3P61077 147 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 UBE2D2P62837 147 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 MRPL23Q16540 153 aaKnown RBP10.5□□□□□ -0.73
CCDC140-201ENST00000295226 BOD1L2Q8IYS8 172 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 SCGB3A1Q96QR1 104 aa10.5□□□□□ -0.73
CCDC140-201ENST00000295226 KLK5Q9Y337 293 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms