RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 IGHV3-33P01772 117 aa11.37□□□□□ -0.59
LRRTM1-201ENST00000295057 CFHR3Q02985 330 aa11.37□□□□□ -0.59
LRRTM1-201ENST00000295057 TMEM126AQ9H061 195 aa11.37□□□□□ -0.59
LRRTM1-201ENST00000295057 NOTCH2Q04721 2471 aa11.37□□□□□ -0.59
LRRTM1-201ENST00000295057 HIST2H2BDQ6DRA6 164 aa11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 U3KQE9 123 aa11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 TRAV2A0A0B4J234 112 aa11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 TEX49A0A1B0GTD5 131 aa11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 LINC00315P59091 139 aa11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 TMEM263Q8WUH6 116 aaKnown RBP11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 ANK3Q12955 4377 aaKnown RBP11.36□□□□□ -0.59
LRRTM1-201ENST00000295057 RPL13AP40429 203 aaKnown RBP11.35□□□□□ -0.59
LRRTM1-201ENST00000295057 PAPPA-AS1Q5QFB9 102 aa11.35□□□□□ -0.59
LRRTM1-201ENST00000295057 Q6YL49 198 aa11.35□□□□□ -0.59
LRRTM1-201ENST00000295057 MTORP42345 2549 aa11.35□□□□□ -0.59
LRRTM1-201ENST00000295057 SETD2Q9BYW2 2564 aaPredicted RBP11.35□□□□□ -0.59
LRRTM1-201ENST00000295057 LGALS3P17931 250 aaKnown RBP11.35□□□□□ -0.59
LRRTM1-201ENST00000295057 IGKV3-7A0A075B6H7 116 aa11.34□□□□□ -0.59
LRRTM1-201ENST00000295057 A0A087WWL8 130 aa11.34□□□□□ -0.59
LRRTM1-201ENST00000295057 MUSTN1Q8IVN3 82 aa11.34□□□□□ -0.59
LRRTM1-201ENST00000295057 KIF25-AS1Q9Y6Z4 181 aa11.34□□□□□ -0.59
LRRTM1-201ENST00000295057 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
LRRTM1-201ENST00000295057 SUMO4Q6EEV6 95 aa11.34□□□□□ -0.59
LRRTM1-201ENST00000295057 P0DMU3 169 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 FAM231AP0DMU4 169 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 FAM231CP0DMU5 169 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 POLR2KP53803 58 aaKnown RBP11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 USMG5Q96IX5 58 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 ZNF580Q9UK33 172 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 ATXN8Q156A1 80 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 Q1RN00 199 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 C3orf56Q8N813 242 aa11.33□□□□□ -0.6
LRRTM1-201ENST00000295057 LINC01587Q99440 93 aa11.32□□□□□ -0.6
LRRTM1-201ENST00000295057 PSMB8P28062 276 aa11.32□□□□□ -0.6
LRRTM1-201ENST00000295057 CHCHD5Q9BSY4 110 aa11.32□□□□□ -0.6
LRRTM1-201ENST00000295057 SDHAF1A6NFY7 115 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 F5H697 171 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 H3BMM0 161 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 LGALS9O00182 355 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 PPP1R17O96001 155 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 MRPL23Q16540 153 aaKnown RBP11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 UBE2WQ96B02 151 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 LINC01600Q96MT4 127 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 TIMM17AQ99595 171 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 ZNF702PQ9H963 129 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 H3BUA1 57 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 POM121L12Q8N7R1 296 aa11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
LRRTM1-201ENST00000295057 IGHV4OR15-8A0A075B7B6 117 aa11.3□□□□□ -0.6
LRRTM1-201ENST00000295057 A0A087WW49 117 aa11.3□□□□□ -0.6
LRRTM1-201ENST00000295057 NDUFA4O00483 81 aa11.3□□□□□ -0.6
LRRTM1-201ENST00000295057 RPL11P62913 178 aaKnown RBP11.3□□□□□ -0.6
LRRTM1-201ENST00000295057 VCYO14598 125 aa11.3□□□□□ -0.6
LRRTM1-201ENST00000295057 TRBV10-2A0A0K0K1G8 114 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 SOCS3O14543 225 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 A0A0B4J2C4 111 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 ADARB2-AS1A8MUL3 147 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 MED14OSP0DP75 135 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 FAM74A4Q5TZK3 123 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 NIPBLQ6KC79 2804 aaeCLIP11.29□□□□□ -0.6
LRRTM1-201ENST00000295057 TRIAP1O43715 76 aa11.28□□□□□ -0.6
LRRTM1-201ENST00000295057 OVOL1O14753 267 aa11.28□□□□□ -0.6
LRRTM1-201ENST00000295057 LEPROTO15243 131 aa11.28□□□□□ -0.6
LRRTM1-201ENST00000295057 ZNF56Q15929 161 aa11.28□□□□□ -0.6
LRRTM1-201ENST00000295057 C18orf65Q6ZTR6 163 aa11.28□□□□□ -0.6
LRRTM1-201ENST00000295057 CSDC2Q9Y534 153 aaKnown RBP11.28□□□□□ -0.6
LRRTM1-201ENST00000295057 RHPN1-AS1Q9BWJ2 59 aa11.27□□□□□ -0.6
LRRTM1-201ENST00000295057 NXPH4O95158 308 aa11.27□□□□□ -0.61
LRRTM1-201ENST00000295057 ZNF22P17026 224 aaPredicted RBP11.26□□□□□ -0.61
LRRTM1-201ENST00000295057 TRBV27A0A0K0K1C4 114 aa11.26□□□□□ -0.61
LRRTM1-201ENST00000295057 C2orf82Q6UX34 121 aa11.26□□□□□ -0.61
LRRTM1-201ENST00000295057 Q6ZSV7 163 aa11.26□□□□□ -0.61
LRRTM1-201ENST00000295057 DNAJC30Q96LL9 226 aa11.26□□□□□ -0.61
LRRTM1-201ENST00000295057 A0A0J9YXV3 536 aa11.25□□□□□ -0.61
LRRTM1-201ENST00000295057 TRBV7-7A0A0K0K1E9 115 aa11.25□□□□□ -0.61
LRRTM1-201ENST00000295057 LINC00694P0DN24 101 aa11.25□□□□□ -0.61
LRRTM1-201ENST00000295057 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
LRRTM1-201ENST00000295057 A0A0J9YXY3 114 aa11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 FAM240AA0A1B0GVK7 77 aa11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 M0R2P5 195 aa11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 KRTAP1-1Q07627 177 aa11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 OTOGQ6ZRI0 2925 aa11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 C5orf47Q569G3 176 aa11.24□□□□□ -0.61
LRRTM1-201ENST00000295057 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
LRRTM1-201ENST00000295057 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.23□□□□□ -0.61
LRRTM1-201ENST00000295057 H7C423 109 aa11.23□□□□□ -0.61
LRRTM1-201ENST00000295057 SYNJ2BPP57105 145 aa11.23□□□□□ -0.61
LRRTM1-201ENST00000295057 NPC2P61916 151 aa11.23□□□□□ -0.61
LRRTM1-201ENST00000295057 TRAV12-3A0A0B4J271 114 aa11.23□□□□□ -0.61
LRRTM1-201ENST00000295057 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms