RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 NIT2Q9NQR4 276 aa16.24■□□□□ 0.19
U2AF1-201ENST00000291552 PGLYRP4Q96LB8 373 aa16.23■□□□□ 0.19
U2AF1-201ENST00000291552 BIN3Q9NQY0 253 aa16.23■□□□□ 0.19
U2AF1-201ENST00000291552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.23■□□□□ 0.19
U2AF1-201ENST00000291552 A0A1B0GUV1 79 aa16.22■□□□□ 0.19
U2AF1-201ENST00000291552 WDR73Q6P4I2 378 aa16.22■□□□□ 0.19
U2AF1-201ENST00000291552 RNASE7Q9H1E1 156 aaKnown RBP16.22■□□□□ 0.19
U2AF1-201ENST00000291552 RPP21Q9H633 154 aaKnown RBP16.21■□□□□ 0.19
U2AF1-201ENST00000291552 OCC1Q8TAD7 63 aa16.2■□□□□ 0.18
U2AF1-201ENST00000291552 SDIM1Q6ZPB5 146 aa16.19■□□□□ 0.18
U2AF1-201ENST00000291552 GATD1Q8NB37 220 aa16.19■□□□□ 0.18
U2AF1-201ENST00000291552 TRAV26-2A0A0B4J265 109 aa16.18■□□□□ 0.18
U2AF1-201ENST00000291552 TWIST1Q15672 202 aa16.18■□□□□ 0.18
U2AF1-201ENST00000291552 GTSF1Q8WW33 167 aa16.18■□□□□ 0.18
U2AF1-201ENST00000291552 TRAV8-4A0A0B4J246 113 aa16.17■□□□□ 0.18
U2AF1-201ENST00000291552 TAGLN2P37802 199 aaKnown RBP16.17■□□□□ 0.18
U2AF1-201ENST00000291552 AMTP48728 403 aa16.17■□□□□ 0.18
U2AF1-201ENST00000291552 HNRNPA3P51991 378 aaKnown RBP16.17■□□□□ 0.18
U2AF1-201ENST00000291552 CNBPP62633 177 aaKnown RBP16.17■□□□□ 0.18
U2AF1-201ENST00000291552 CLRN3Q8NCR9 226 aa16.17■□□□□ 0.18
U2AF1-201ENST00000291552 COTL1Q14019 142 aa16.16■□□□□ 0.18
U2AF1-201ENST00000291552 SLPIP03973 132 aa16.15■□□□□ 0.18
U2AF1-201ENST00000291552 FOXA3P55318 350 aaPredicted RBP16.15■□□□□ 0.18
U2AF1-201ENST00000291552 RPL37AP61513 92 aaKnown RBP16.15■□□□□ 0.18
U2AF1-201ENST00000291552 RPL39LQ96EH5 51 aaKnown RBP16.15■□□□□ 0.18
U2AF1-201ENST00000291552 hDV102S1A0JD36 115 aa16.14■□□□□ 0.17
U2AF1-201ENST00000291552 Q6ZNX1 250 aa16.14■□□□□ 0.17
U2AF1-201ENST00000291552 UBE2L6O14933 153 aa16.13■□□□□ 0.17
U2AF1-201ENST00000291552 CIRBPQ14011 172 aaKnown RBP16.13■□□□□ 0.17
U2AF1-201ENST00000291552 OXTP01178 125 aa16.11■□□□□ 0.17
U2AF1-201ENST00000291552 ALKAL2Q6UX46 152 aa16.11■□□□□ 0.17
U2AF1-201ENST00000291552 TMEM250H0YL14 139 aa16.1■□□□□ 0.17
U2AF1-201ENST00000291552 C15orf56Q8N910 161 aa16.1■□□□□ 0.17
U2AF1-201ENST00000291552 LYPD6BQ8NI32 183 aa16.09■□□□□ 0.17
U2AF1-201ENST00000291552 GAGE12HA6NDE8 117 aa16.08■□□□□ 0.16
U2AF1-201ENST00000291552 GATCO43716 136 aaKnown RBP16.08■□□□□ 0.16
U2AF1-201ENST00000291552 FAM231DQ6ZW35 169 aa16.08■□□□□ 0.16
U2AF1-201ENST00000291552 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.07■□□□□ 0.16
U2AF1-201ENST00000291552 IGKV3OR2-268A0A0C4DH90 116 aa16.07■□□□□ 0.16
U2AF1-201ENST00000291552 IGKV2-29A2NJV5 120 aaPredicted RBP16.07■□□□□ 0.16
U2AF1-201ENST00000291552 CHTF8P0CG12 524 aa16.07■□□□□ 0.16
U2AF1-201ENST00000291552 IGHV3-64A0A075B6Q5 118 aa16.06■□□□□ 0.16
U2AF1-201ENST00000291552 BLOC1S1P78537 153 aa16.06■□□□□ 0.16
U2AF1-201ENST00000291552 AKAP14Q86UN6 197 aa16.06■□□□□ 0.16
U2AF1-201ENST00000291552 SDHAF1A6NFY7 115 aa16.05■□□□□ 0.16
U2AF1-201ENST00000291552 GAS8-AS1O95177 125 aa16.05■□□□□ 0.16
U2AF1-201ENST00000291552 NCR2O95944 276 aa16.05■□□□□ 0.16
U2AF1-201ENST00000291552 AP5S1Q9NUS5 200 aa16.05■□□□□ 0.16
U2AF1-201ENST00000291552 hCG_2014768A0A024R1R8 64 aa16.03■□□□□ 0.16
U2AF1-201ENST00000291552 FAM231BA6NCW3 169 aa16.03■□□□□ 0.16
U2AF1-201ENST00000291552 A8MWL6 223 aa16.03■□□□□ 0.16
U2AF1-201ENST00000291552 APCSP02743 223 aa16.03■□□□□ 0.16
U2AF1-201ENST00000291552 SMIM15Q7Z3B0 74 aa16.03■□□□□ 0.16
U2AF1-201ENST00000291552 SPACA4Q8TDM5 124 aa16.03■□□□□ 0.16
U2AF1-201ENST00000291552 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.02■□□□□ 0.16
U2AF1-201ENST00000291552 FGF6P10767 208 aa16.02■□□□□ 0.16
U2AF1-201ENST00000291552 CT83Q5H943 113 aa16.02■□□□□ 0.16
U2AF1-201ENST00000291552 AMMECR1LQ6DCA0 310 aa16.02■□□□□ 0.16
U2AF1-201ENST00000291552 CHCHD10Q8WYQ3 142 aaPredicted RBP16.02■□□□□ 0.16
U2AF1-201ENST00000291552 A0A087WYN8 130 aa16.01■□□□□ 0.15
U2AF1-201ENST00000291552 TRBV6-5A0A0K0K1A5 114 aa16.01■□□□□ 0.15
U2AF1-201ENST00000291552 CEBPGP53567 150 aa16.01■□□□□ 0.15
U2AF1-201ENST00000291552 HIGD2BQ4VC39 106 aa16.01■□□□□ 0.15
U2AF1-201ENST00000291552 RNASEKQ6P5S7 137 aaKnown RBP16.01■□□□□ 0.15
U2AF1-201ENST00000291552 TEX261Q6UWH6 196 aa16.01■□□□□ 0.15
U2AF1-201ENST00000291552 H7C423 109 aa16■□□□□ 0.15
U2AF1-201ENST00000291552 RNF185Q96GF1 192 aa15.99■□□□□ 0.15
U2AF1-201ENST00000291552 UBR4Q5T4S7 5183 aa15.98■□□□□ 0.15
U2AF1-201ENST00000291552 TSHBP01222 138 aa15.98■□□□□ 0.15
U2AF1-201ENST00000291552 FOXI1Q12951 378 aa15.98■□□□□ 0.15
U2AF1-201ENST00000291552 SERTAD4-AS1Q5TG53 156 aa15.98■□□□□ 0.15
U2AF1-201ENST00000291552 LINC01551Q86U37 167 aa15.98■□□□□ 0.15
U2AF1-201ENST00000291552 SMIM7Q9BQ49 75 aa15.98■□□□□ 0.15
U2AF1-201ENST00000291552 I3L3M4 83 aa15.97■□□□□ 0.15
U2AF1-201ENST00000291552 ESDP10768 282 aa15.97■□□□□ 0.15
U2AF1-201ENST00000291552 CFAP161Q6P656 301 aa15.97■□□□□ 0.15
U2AF1-201ENST00000291552 PLAC8Q9NZF1 115 aa15.97■□□□□ 0.15
U2AF1-201ENST00000291552 TNXBP22105 4242 aa15.97■□□□□ 0.15
U2AF1-201ENST00000291552 GVQW2A0A096LPI5 108 aaPredicted RBP15.96■□□□□ 0.15
U2AF1-201ENST00000291552 PMCHP20382 165 aa15.96■□□□□ 0.15
U2AF1-201ENST00000291552 RPS10P46783 165 aaKnown RBP15.96■□□□□ 0.15
U2AF1-201ENST00000291552 TSKUQ8WUA8 353 aa15.96■□□□□ 0.15
U2AF1-201ENST00000291552 TMEM242Q9NWH2 141 aa15.96■□□□□ 0.15
U2AF1-201ENST00000291552 HIGD1CA8MV81 97 aa15.95■□□□□ 0.14
U2AF1-201ENST00000291552 MT1HL1P0DM35 61 aa15.95■□□□□ 0.14
U2AF1-201ENST00000291552 ZNF25P17030 456 aaPredicted RBP15.95■□□□□ 0.14
U2AF1-201ENST00000291552 COX6A2Q02221 97 aa15.95■□□□□ 0.14
U2AF1-201ENST00000291552 OR5A1Q8NGJ0 315 aa15.95■□□□□ 0.14
U2AF1-201ENST00000291552 A0A1B0GUT8 65 aa15.94■□□□□ 0.14
U2AF1-201ENST00000291552 PRSS3P2Q8NHM4 247 aa15.94■□□□□ 0.14
U2AF1-201ENST00000291552 FAM210AQ96ND0 272 aa15.94■□□□□ 0.14
U2AF1-201ENST00000291552 TMEM191AQ9H0A3 160 aa15.94■□□□□ 0.14
U2AF1-201ENST00000291552 NDUFS6O75380 124 aaKnown RBP15.93■□□□□ 0.14
U2AF1-201ENST00000291552 SRP19P09132 144 aaKnown RBP15.93■□□□□ 0.14
U2AF1-201ENST00000291552 POLR2KP53803 58 aaKnown RBP15.93■□□□□ 0.14
U2AF1-201ENST00000291552 EIF5A2Q9GZV4 153 aaKnown RBP15.93■□□□□ 0.14
U2AF1-201ENST00000291552 ST20Q9HBF5 79 aa15.93■□□□□ 0.14
U2AF1-201ENST00000291552 OSTCQ9NRP0 149 aa15.93■□□□□ 0.14
U2AF1-201ENST00000291552 BORCS7Q96B45 105 aa15.92■□□□□ 0.14
U2AF1-201ENST00000291552 DPH3Q96FX2 82 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms