RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
PKNOX1-201ENST00000291547 COX7BP24311 80 aa8.21□□□□□ -1.09
PKNOX1-201ENST00000291547 MIAQ16674 131 aa8.21□□□□□ -1.09
PKNOX1-201ENST00000291547 NAV3Q8IVL0 2385 aa8.21□□□□□ -1.09
PKNOX1-201ENST00000291547 SPRNQ5BIV9 151 aa8.21□□□□□ -1.1
PKNOX1-201ENST00000291547 MED14OSP0DP75 135 aa8.21□□□□□ -1.1
PKNOX1-201ENST00000291547 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.1
PKNOX1-201ENST00000291547 NFE4Q86UQ8 179 aa8.21□□□□□ -1.1
PKNOX1-201ENST00000291547 MKI67P46013 3256 aaKnown RBP8.21□□□□□ -1.1
PKNOX1-201ENST00000291547 CHD9Q3L8U1 2897 aa8.21□□□□□ -1.1
PKNOX1-201ENST00000291547 NUP210LQ5VU65 1888 aa8.2□□□□□ -1.1
PKNOX1-201ENST00000291547 HIST2H2BDQ6DRA6 164 aa8.2□□□□□ -1.1
PKNOX1-201ENST00000291547 CEMP1Q6PRD7 247 aaPredicted RBP8.2□□□□□ -1.1
PKNOX1-201ENST00000291547 TP73-AS1Q9UF72 201 aa8.2□□□□□ -1.1
PKNOX1-201ENST00000291547 MBD6Q96DN6 1003 aa8.2□□□□□ -1.1
PKNOX1-201ENST00000291547 PIEZO1Q92508 2521 aa8.2□□□□□ -1.1
PKNOX1-201ENST00000291547 FREM1Q5H8C1 2179 aa8.2□□□□□ -1.1
PKNOX1-201ENST00000291547 C19orf71A6NCJ1 209 aa8.19□□□□□ -1.1
PKNOX1-201ENST00000291547 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
PKNOX1-201ENST00000291547 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
PKNOX1-201ENST00000291547 Q8N9W7 124 aa8.19□□□□□ -1.1
PKNOX1-201ENST00000291547 MDFICQ9P1T7 246 aa8.19□□□□□ -1.1
PKNOX1-201ENST00000291547 COL5A1P20908 1838 aaPredicted RBP8.19□□□□□ -1.1
PKNOX1-201ENST00000291547 USP17L23D6RBM5 183 aa8.19□□□□□ -1.1
PKNOX1-201ENST00000291547 C9orf66Q5T8R8 295 aa8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 ZNF295-AS1Q8N0V1 137 aa8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 IGHV4-61A0A0C4DH41 118 aa8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 NDUFC2-KCTD14E9PQ53 114 aa8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 SCXQ7RTU7 201 aa8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 MLST8Q9BVC4 326 aa8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 IGLV2-8P01709 118 aa8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 GRNP28799 593 aaKnown RBP8.18□□□□□ -1.1
PKNOX1-201ENST00000291547 PLA2G5P39877 138 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 GDF5OSQ5U4N7 250 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 RANBP2P49792 3224 aaKnown RBP8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 CASC2Q6XLA1 102 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 TRBV6-1A0A0K0K1D8 114 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 LINC00694P0DN24 101 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 ENHOQ6UWT2 76 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 K7EMT4 169 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 DEFB4AO15263 64 aa8.17□□□□□ -1.1
PKNOX1-201ENST00000291547 HIGD2AQ9BW72 106 aa8.16□□□□□ -1.1
PKNOX1-201ENST00000291547 E7EUB6 86 aa8.16□□□□□ -1.1
PKNOX1-201ENST00000291547 F8W735 103 aaPredicted RBP8.16□□□□□ -1.1
PKNOX1-201ENST00000291547 PRR14LQ5THK1 2151 aa8.16□□□□□ -1.1
PKNOX1-201ENST00000291547 WDR87Q6ZQQ6 2873 aa8.16□□□□□ -1.1
PKNOX1-201ENST00000291547 WFDC11Q8NEX6 87 aa8.16□□□□□ -1.1
PKNOX1-201ENST00000291547 PLXNB1O43157 2135 aa8.15□□□□□ -1.1
PKNOX1-201ENST00000291547 C5orf56Q8N8D9 126 aa8.15□□□□□ -1.1
PKNOX1-201ENST00000291547 A0A096LNI7 61 aa8.15□□□□□ -1.1
PKNOX1-201ENST00000291547 DEFB135Q30KP9 77 aa8.15□□□□□ -1.1
PKNOX1-201ENST00000291547 HIVEP2P31629 2446 aa8.15□□□□□ -1.1
PKNOX1-201ENST00000291547 TRBV10-1A0A0K0K1A3 114 aa8.15□□□□□ -1.11
PKNOX1-201ENST00000291547 INSL3P51460 131 aa8.15□□□□□ -1.11
PKNOX1-201ENST00000291547 ATP5EP2Q5VTU8 51 aa8.15□□□□□ -1.11
PKNOX1-201ENST00000291547 K7ERS5 55 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 SLPIP03973 132 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 GPHB5Q86YW7 130 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 ANKHD1Q8IWZ3 2542 aaKnown RBP8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 ARHGAP21Q5T5U3 1957 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 A0A0J9YX75 114 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 ZNF80P51504 273 aaPredicted RBP8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 LINC00322Q6ZN03 302 aaPredicted RBP8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 C10orf105Q8TEF2 133 aa8.14□□□□□ -1.11
PKNOX1-201ENST00000291547 IGHV4-30-2A0A087WSY4 118 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 IGKV2-24A0A0C4DH68 120 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 FAM19A5Q7Z5A7 132 aaPredicted RBP8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 CDKN2A-AS1Q9UH64 79 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 IGLV1-47P01700 117 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 P0DMU3 169 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 FAM231AP0DMU4 169 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 FAM231CP0DMU5 169 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 UNQ9165/PRO28630Q6UXU0 137 aa8.13□□□□□ -1.11
PKNOX1-201ENST00000291547 WISP2O76076 250 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 COX7CP15954 63 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 B9D2Q9BPU9 175 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 KMT2EQ8IZD2 1858 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 P0C879 139 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 Q8NA96 180 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 C20orf173Q96LM9 149 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 SIRPDQ9H106 197 aa8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 TMEM263Q8WUH6 116 aaKnown RBP8.12□□□□□ -1.11
PKNOX1-201ENST00000291547 TRIAP1O43715 76 aa8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 IGLV2-14P01704 120 aa8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 PCNX3Q9H6A9 2034 aa8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 RPS28P62857 69 aaKnown RBP8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 KRTAP27-1Q3LI81 207 aa8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 ZFAND2AQ8N6M9 145 aa8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 TRANK1O15050 2925 aa8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 NEXN-AS1Q8NBZ9 246 aa8.11□□□□□ -1.11
PKNOX1-201ENST00000291547 J3QKU1 62 aa8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 MRPS12O15235 138 aaKnown RBP8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 ZNF22P17026 224 aaPredicted RBP8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 SERP2Q8N6R1 65 aa8.1□□□□□ -1.11
PKNOX1-201ENST00000291547 MAPKAPK5-AS1Q8N8E1 139 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms