RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 HHLA3Q9XRX5 114 aa10.76□□□□□ -0.69
NCK1-201ENST00000288986 TCTAP57738 103 aa10.76□□□□□ -0.69
NCK1-201ENST00000288986 ORMDL2Q53FV1 153 aa10.76□□□□□ -0.69
NCK1-201ENST00000288986 APLNQ9ULZ1 77 aa10.76□□□□□ -0.69
NCK1-201ENST00000288986 LYSTQ99698 3801 aa10.75□□□□□ -0.69
NCK1-201ENST00000288986 PRO0255Q9UI72 69 aa10.75□□□□□ -0.69
NCK1-201ENST00000288986 P0DMU3 169 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 FAM231AP0DMU4 169 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 FAM231CP0DMU5 169 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 SPATA12Q7Z6I5 190 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 NEXN-AS1Q8NBZ9 246 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 DNAJC30Q96LL9 226 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 SCGB1D1O95968 90 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 NUDT3O95989 172 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 Q9UF83 564 aa10.74□□□□□ -0.69
NCK1-201ENST00000288986 PAX4O43316 350 aa10.73□□□□□ -0.69
NCK1-201ENST00000288986 CRYBA4P53673 196 aa10.73□□□□□ -0.69
NCK1-201ENST00000288986 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
NCK1-201ENST00000288986 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
NCK1-201ENST00000288986 VSIG2Q96IQ7 327 aa10.73□□□□□ -0.69
NCK1-201ENST00000288986 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
NCK1-201ENST00000288986 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
NCK1-201ENST00000288986 MAP1LC3CQ9BXW4 147 aa10.72□□□□□ -0.69
NCK1-201ENST00000288986 PET117Q6UWS5 81 aa10.72□□□□□ -0.69
NCK1-201ENST00000288986 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
NCK1-201ENST00000288986 TOMM6Q96B49 74 aa10.72□□□□□ -0.69
NCK1-201ENST00000288986 KMT2CQ8NEZ4 4911 aaKnown RBP10.72□□□□□ -0.69
NCK1-201ENST00000288986 H3BNG1 76 aa10.71□□□□□ -0.69
NCK1-201ENST00000288986 I3L3M4 83 aa10.71□□□□□ -0.69
NCK1-201ENST00000288986 K7EQD1 137 aa10.71□□□□□ -0.69
NCK1-201ENST00000288986 TSHBP01222 138 aa10.71□□□□□ -0.69
NCK1-201ENST00000288986 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.69
NCK1-201ENST00000288986 TNFRSF18Q9Y5U5 241 aa10.71□□□□□ -0.69
NCK1-201ENST00000288986 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
NCK1-201ENST00000288986 RHOHQ15669 191 aa10.7□□□□□ -0.7
NCK1-201ENST00000288986 LINC01549A6NIU2 74 aa10.7□□□□□ -0.7
NCK1-201ENST00000288986 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
NCK1-201ENST00000288986 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
NCK1-201ENST00000288986 ATP5LO75964 103 aa10.69□□□□□ -0.7
NCK1-201ENST00000288986 G0S2P27469 103 aa10.69□□□□□ -0.7
NCK1-201ENST00000288986 C2orf66Q6UXQ4 117 aa10.69□□□□□ -0.7
NCK1-201ENST00000288986 LY6G6CO95867 125 aa10.68□□□□□ -0.7
NCK1-201ENST00000288986 PRADC1Q9BSG0 188 aa10.68□□□□□ -0.7
NCK1-201ENST00000288986 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
NCK1-201ENST00000288986 A0A096LPF7 62 aa10.68□□□□□ -0.7
NCK1-201ENST00000288986 GYPEP15421 78 aa10.68□□□□□ -0.7
NCK1-201ENST00000288986 ICOSQ9Y6W8 199 aa10.68□□□□□ -0.7
NCK1-201ENST00000288986 CYSLTR1Q9Y271 337 aa10.67□□□□□ -0.7
NCK1-201ENST00000288986 LOC100131303A0A0U1RQF7 123 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 S100A12P80511 92 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 MRPL23Q16540 153 aaKnown RBP10.66□□□□□ -0.7
NCK1-201ENST00000288986 LGALS9CQ6DKI2 356 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 LINC00476Q8WZB0 136 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 C20orf202A1L168 122 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 UBE2D3P61077 147 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 UBE2D2P62837 147 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 RPL36AP83881 106 aaKnown RBP10.66□□□□□ -0.7
NCK1-201ENST00000288986 ERASQ7Z444 233 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 C20orf203Q8NBC4 194 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 ZNRF2Q8NHG8 242 aa10.66□□□□□ -0.7
NCK1-201ENST00000288986 RPL36ALQ969Q0 106 aaKnown RBP10.66□□□□□ -0.7
NCK1-201ENST00000288986 IGIPA6NJ69 53 aa10.65□□□□□ -0.7
NCK1-201ENST00000288986 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
NCK1-201ENST00000288986 ZNF664Q8N3J9 261 aa10.65□□□□□ -0.7
NCK1-201ENST00000288986 DEFB104AQ8WTQ1 72 aa10.65□□□□□ -0.7
NCK1-201ENST00000288986 CCL18P55774 89 aa10.64□□□□□ -0.71
NCK1-201ENST00000288986 UBE2DNLQ8IWF7 75 aa10.64□□□□□ -0.71
NCK1-201ENST00000288986 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
NCK1-201ENST00000288986 LCE6AA0A183 80 aa10.64□□□□□ -0.71
NCK1-201ENST00000288986 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.64□□□□□ -0.71
NCK1-201ENST00000288986 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
NCK1-201ENST00000288986 DAZ4Q86SG3 579 aaKnown RBP10.64□□□□□ -0.71
NCK1-201ENST00000288986 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
NCK1-201ENST00000288986 CHCHD7Q9BUK0 85 aa10.64□□□□□ -0.71
NCK1-201ENST00000288986 DAZ3Q9NR90 486 aaKnown RBP10.64□□□□□ -0.71
NCK1-201ENST00000288986 GAGE12JA6NER3 117 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 H0Y8G0 127 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 GAGE1Q13065 139 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 GAGE4Q13068 117 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 GAGE5Q13069 117 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 COTL1Q14019 142 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 ODF1Q14990 250 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 ESRGQ1W209 222 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 GAGE13Q4V321 117 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 SACSQ9NZJ4 4579 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 TRAV12-1A0A0B4J245 112 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 VAMP8Q9BV40 100 aa10.62□□□□□ -0.71
NCK1-201ENST00000288986 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
NCK1-201ENST00000288986 PRSS1P07477 247 aa10.61□□□□□ -0.71
NCK1-201ENST00000288986 ATOH7Q8N100 152 aa10.61□□□□□ -0.71
NCK1-201ENST00000288986 BAALCQ8WXS3 180 aa10.61□□□□□ -0.71
NCK1-201ENST00000288986 LINC00588Q9Y4M8 146 aa10.61□□□□□ -0.71
NCK1-201ENST00000288986 TRAV9-2A0A087WT02 112 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 PKIAP61925 76 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 SH2D6Q7Z4S9 175 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 PMCHL2Q9BQD1 86 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 PYGO1Q9Y3Y4 419 aa10.6□□□□□ -0.71
NCK1-201ENST00000288986 A0A087WX48 190 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms