RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ZNF56Q15929 161 aa7.96□□□□□ -1.13
GGPS1-201ENST00000282841 TM2D2Q9BX73 214 aa7.96□□□□□ -1.13
GGPS1-201ENST00000282841 TENM3Q9P273 2699 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 TRBV20-1A0A075B6N2 111 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 A0A096LNJ9 63 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 A0A1W2PPM0 123 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 IGHV3-53P01767 116 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 FABP2P12104 132 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 TCTAP57738 103 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 KIF25-AS1Q9Y6Z4 181 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 NHLRC4P0CG21 123 aaPredicted RBP7.96□□□□□ -1.14
GGPS1-201ENST00000282841 WFDC2Q14508 124 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 SUMO4Q6EEV6 95 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 SYT8Q8NBV8 401 aa7.96□□□□□ -1.14
GGPS1-201ENST00000282841 H3BRM9 83 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 LEPROTL1O95214 131 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 CRYGDP07320 174 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 XGP55808 180 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 MAP1LC3AQ9H492 121 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 hDV102S1A0JD36 115 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 SEC11AP67812 179 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 Q6ZSN1 163 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 Q6ZUT4 128 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 GTSCR1Q86UQ5 136 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 C11orf72Q8NBR9 251 aa7.95□□□□□ -1.14
GGPS1-201ENST00000282841 TRGV11A0A075B6L2 103 aa7.94□□□□□ -1.14
GGPS1-201ENST00000282841 LOC107984640A0A0U1RRK4 108 aa7.94□□□□□ -1.14
GGPS1-201ENST00000282841 A6NDN8 102 aa7.94□□□□□ -1.14
GGPS1-201ENST00000282841 DEFB4AO15263 64 aa7.94□□□□□ -1.14
GGPS1-201ENST00000282841 C9orf66Q5T8R8 295 aa7.94□□□□□ -1.14
GGPS1-201ENST00000282841 ZFAND6Q6FIF0 208 aa7.94□□□□□ -1.14
GGPS1-201ENST00000282841 CHCHD1Q96BP2 118 aaKnown RBP7.94□□□□□ -1.14
GGPS1-201ENST00000282841 TRGV1A0A0A0MS02 117 aa7.93□□□□□ -1.14
GGPS1-201ENST00000282841 Q6ZTI0 123 aa7.93□□□□□ -1.14
GGPS1-201ENST00000282841 NOP10Q9NPE3 64 aaKnown RBP7.93□□□□□ -1.14
GGPS1-201ENST00000282841 PRSS29PA6NIE9 313 aa7.93□□□□□ -1.14
GGPS1-201ENST00000282841 NXPH4O95158 308 aa7.93□□□□□ -1.14
GGPS1-201ENST00000282841 MED14OSP0DP75 135 aa7.93□□□□□ -1.14
GGPS1-201ENST00000282841 SEC61GP60059 68 aa7.92□□□□□ -1.14
GGPS1-201ENST00000282841 TMEM97Q5BJF2 176 aa7.92□□□□□ -1.14
GGPS1-201ENST00000282841 TMEM158Q8WZ71 300 aa7.92□□□□□ -1.14
GGPS1-201ENST00000282841 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
GGPS1-201ENST00000282841 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
GGPS1-201ENST00000282841 IGLV2-18A0A075B6J9 118 aa7.92□□□□□ -1.14
GGPS1-201ENST00000282841 SUMO2P61956 95 aaKnown RBP7.92□□□□□ -1.14
GGPS1-201ENST00000282841 ZNF415Q09FC8 603 aa7.92□□□□□ -1.14
GGPS1-201ENST00000282841 MORN3Q6PF18 240 aaPredicted RBP7.92□□□□□ -1.14
GGPS1-201ENST00000282841 MAP1LC3CQ9BXW4 147 aa7.92□□□□□ -1.14
GGPS1-201ENST00000282841 M0R2P5 195 aa7.91□□□□□ -1.14
GGPS1-201ENST00000282841 DEFB135Q30KP9 77 aa7.91□□□□□ -1.14
GGPS1-201ENST00000282841 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
GGPS1-201ENST00000282841 POM121L12Q8N7R1 296 aa7.91□□□□□ -1.14
GGPS1-201ENST00000282841 CSNK1G2-AS1Q8NCQ2 148 aa7.91□□□□□ -1.14
GGPS1-201ENST00000282841 ZNF747Q9BV97 191 aa7.9□□□□□ -1.14
GGPS1-201ENST00000282841 KRTAP10-11P60412 298 aa7.9□□□□□ -1.15
GGPS1-201ENST00000282841 SAMD5Q5TGI4 173 aa7.9□□□□□ -1.15
GGPS1-201ENST00000282841 CFAP126Q5VTH2 177 aa7.9□□□□□ -1.15
GGPS1-201ENST00000282841 Q8N8P6 123 aa7.9□□□□□ -1.15
GGPS1-201ENST00000282841 SMIM2Q9BVW6 85 aa7.9□□□□□ -1.15
GGPS1-201ENST00000282841 IGHV3-38A0A0C4DH36 116 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 SYS1-DBNDD2H3BUS1 97 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 M0QY20 66 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 FAM19A5Q7Z5A7 132 aaPredicted RBP7.89□□□□□ -1.15
GGPS1-201ENST00000282841 TMEM70Q9BUB7 260 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 SDHAF1A6NFY7 115 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 HBDP02042 147 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 WFDC9Q8NEX5 89 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 DNAJC30Q96LL9 226 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 NDUFV3P56181 108 aaKnown RBP7.89□□□□□ -1.15
GGPS1-201ENST00000282841 ZC2HC1BQ5TFG8 222 aa7.89□□□□□ -1.15
GGPS1-201ENST00000282841 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
GGPS1-201ENST00000282841 PLAC8L1A1L4L8 177 aa7.88□□□□□ -1.15
GGPS1-201ENST00000282841 LINC00694P0DN24 101 aa7.88□□□□□ -1.15
GGPS1-201ENST00000282841 DEFB130BP0DP73 79 aa7.88□□□□□ -1.15
GGPS1-201ENST00000282841 DEFB130AP0DP74 79 aa7.88□□□□□ -1.15
GGPS1-201ENST00000282841 RPL39P62891 51 aaKnown RBP7.88□□□□□ -1.15
GGPS1-201ENST00000282841 LAGE3Q14657 143 aa7.88□□□□□ -1.15
GGPS1-201ENST00000282841 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
GGPS1-201ENST00000282841 CMC4P56277 68 aaPredicted RBP7.88□□□□□ -1.15
GGPS1-201ENST00000282841 RRN3P1Q2M238 152 aa7.88□□□□□ -1.15
GGPS1-201ENST00000282841 PHLDA1Q8WV24 401 aaPredicted RBP7.88□□□□□ -1.15
GGPS1-201ENST00000282841 F8W1H4 67 aa7.87□□□□□ -1.15
GGPS1-201ENST00000282841 KIR2DL5BQ8NHK3 375 aa7.87□□□□□ -1.15
GGPS1-201ENST00000282841 APOMO95445 188 aa7.87□□□□□ -1.15
GGPS1-201ENST00000282841 IGHV4-30-4P0DP06 118 aa7.87□□□□□ -1.15
GGPS1-201ENST00000282841 TMEM263Q8WUH6 116 aaKnown RBP7.87□□□□□ -1.15
GGPS1-201ENST00000282841 DKK2Q9UBU2 259 aa7.87□□□□□ -1.15
GGPS1-201ENST00000282841 TRGV2A0A075B6R0 118 aa7.86□□□□□ -1.15
GGPS1-201ENST00000282841 FCER1GP30273 86 aa7.86□□□□□ -1.15
GGPS1-201ENST00000282841 C2orf91Q6ZV80 131 aa7.86□□□□□ -1.15
GGPS1-201ENST00000282841 TTC32Q5I0X7 151 aa7.86□□□□□ -1.15
GGPS1-201ENST00000282841 IFI27L1Q96BM0 104 aa7.86□□□□□ -1.15
GGPS1-201ENST00000282841 MDFIQ99750 246 aa7.86□□□□□ -1.15
GGPS1-201ENST00000282841 OPRPNQ99935 248 aaPredicted RBP7.86□□□□□ -1.15
GGPS1-201ENST00000282841 PRSS1P07477 247 aa7.85□□□□□ -1.15
GGPS1-201ENST00000282841 LOC100131303A0A0U1RQF7 123 aa7.85□□□□□ -1.15
GGPS1-201ENST00000282841 A0A1B0GWB2 263 aa7.85□□□□□ -1.15
GGPS1-201ENST00000282841 OR13C6PQ8NH95 151 aa7.85□□□□□ -1.15
GGPS1-201ENST00000282841 TMEM126AQ9H061 195 aa7.85□□□□□ -1.15
GGPS1-201ENST00000282841 EDA2RQ9HAV5 297 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms