RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 K7EIM0 57 aa6.72□□□□□ -1.33
NIPBL-201ENST00000282516 BLCAPP62952 87 aa6.72□□□□□ -1.33
NIPBL-201ENST00000282516 DIAPH2-AS1Q14236 149 aa6.72□□□□□ -1.33
NIPBL-201ENST00000282516 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
NIPBL-201ENST00000282516 CENPVL3A0A0U1RRI6 287 aa6.71□□□□□ -1.33
NIPBL-201ENST00000282516 LTBP1Q14766 1721 aa6.71□□□□□ -1.33
NIPBL-201ENST00000282516 K7EMT4 169 aa6.71□□□□□ -1.33
NIPBL-201ENST00000282516 PRSS33Q8NF86 280 aa6.71□□□□□ -1.33
NIPBL-201ENST00000282516 MTORP42345 2549 aa6.71□□□□□ -1.33
NIPBL-201ENST00000282516 AJUBAQ96IF1 538 aa6.71□□□□□ -1.33
NIPBL-201ENST00000282516 NCOR2Q9Y618 2525 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 C20orf173Q96LM9 149 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 IGLC6P0CF74 106 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 C9orf85Q96MD7 179 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 CTSGP08311 255 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 INSL3P51460 131 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 ZFAND2AQ8N6M9 145 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 TMEM89A2RUT3 159 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 SPRY2O43597 315 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 CRYGDP07320 174 aa6.71□□□□□ -1.34
NIPBL-201ENST00000282516 IGKV1-17P01599 117 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 FHL1Q13642 323 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 UBE2D4Q9Y2X8 147 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 SERP2Q8N6R1 65 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 MYCNOSP40205 109 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 ESM1Q9NQ30 184 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 IGF2RP11717 2491 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 UBE2D1P51668 147 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 REG3AQ06141 175 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 C5orf56Q8N8D9 126 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 Q8N9W7 124 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 DHRS4-AS1Q9P1J3 65 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 TRBV6-1A0A0K0K1D8 114 aa6.7□□□□□ -1.34
NIPBL-201ENST00000282516 DEFB113Q30KQ7 82 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 CRIPAKQ8N1N5 446 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 C20orf203Q8NBC4 194 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 TIMM17BO60830 172 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 MSRB1Q9NZV6 116 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 FAM215AQ9Y5M1 114 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 UBE2D3P61077 147 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 CDPF1Q6NVV7 123 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 A0A0J9YXY3 114 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 DEFB4AO15263 64 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
NIPBL-201ENST00000282516 FAM222AQ5U5X8 452 aa6.68□□□□□ -1.34
NIPBL-201ENST00000282516 CCKP06307 115 aa6.68□□□□□ -1.34
NIPBL-201ENST00000282516 IGHV4-38-2P0DP08 117 aa6.68□□□□□ -1.34
NIPBL-201ENST00000282516 SPRY4Q9C004 299 aa6.68□□□□□ -1.34
NIPBL-201ENST00000282516 PTPRSQ13332 1948 aa6.68□□□□□ -1.34
NIPBL-201ENST00000282516 MRPS36P82909 103 aaKnown RBP6.68□□□□□ -1.34
NIPBL-201ENST00000282516 WT1P19544 449 aaPredicted RBP6.68□□□□□ -1.34
NIPBL-201ENST00000282516 IBA57-AS1B1ANH7 110 aa6.68□□□□□ -1.34
NIPBL-201ENST00000282516 PTH2Q96A98 100 aa6.68□□□□□ -1.34
NIPBL-201ENST00000282516 LRP4O75096 1905 aa6.67□□□□□ -1.34
NIPBL-201ENST00000282516 CHCHD10Q8WYQ3 142 aaPredicted RBP6.67□□□□□ -1.34
NIPBL-201ENST00000282516 IGKV1D-37A0A075B6S9 117 aa6.67□□□□□ -1.34
NIPBL-201ENST00000282516 LINC00269Q8N2A0 174 aa6.67□□□□□ -1.34
NIPBL-201ENST00000282516 WDR87Q6ZQQ6 2873 aa6.67□□□□□ -1.34
NIPBL-201ENST00000282516 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
NIPBL-201ENST00000282516 IGHV4-30-2A0A087WSY4 118 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 TDRG1Q3Y452 100 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 ODF3Q96PU9 254 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 RETNQ9HD89 108 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 P0DMU3 169 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 FAM231AP0DMU4 169 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 FAM231CP0DMU5 169 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 C1orf158Q8N1D5 194 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 IMUPQ9GZP8 106 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 A0A0J9YWU9 116 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 FAM167A-AS1Q96KT0 104 aa6.66□□□□□ -1.34
NIPBL-201ENST00000282516 THSD7BQ9C0I4 1608 aa6.65□□□□□ -1.34
NIPBL-201ENST00000282516 UBE2D2P62837 147 aa6.65□□□□□ -1.34
NIPBL-201ENST00000282516 SMIM9A6NGZ8 99 aa6.65□□□□□ -1.34
NIPBL-201ENST00000282516 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.34
NIPBL-201ENST00000282516 C3orf84H3BNL1 204 aa6.65□□□□□ -1.34
NIPBL-201ENST00000282516 A0A0J9YX75 114 aa6.65□□□□□ -1.34
NIPBL-201ENST00000282516 PRYO14603 147 aa6.65□□□□□ -1.34
NIPBL-201ENST00000282516 CTSZQ9UBR2 303 aa6.65□□□□□ -1.34
NIPBL-201ENST00000282516 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.35
NIPBL-201ENST00000282516 SPTBN4Q9H254 2564 aa6.65□□□□□ -1.35
NIPBL-201ENST00000282516 ZNF503-AS2A6NEH8 195 aa6.65□□□□□ -1.35
NIPBL-201ENST00000282516 TTTY13Q9BZ97 58 aa6.65□□□□□ -1.35
NIPBL-201ENST00000282516 TRBV27A0A0K0K1C4 114 aa6.65□□□□□ -1.35
NIPBL-201ENST00000282516 TMEM223A0PJW6 202 aa6.65□□□□□ -1.35
NIPBL-201ENST00000282516 SIRPDQ9H106 197 aa6.65□□□□□ -1.35
NIPBL-201ENST00000282516 SNURFQ9Y675 71 aa6.65□□□□□ -1.35
NIPBL-201ENST00000282516 HILS1P60008 231 aa6.64□□□□□ -1.35
NIPBL-201ENST00000282516 SPATA12Q7Z6I5 190 aa6.64□□□□□ -1.35
NIPBL-201ENST00000282516 A0A096LNI7 61 aa6.64□□□□□ -1.35
NIPBL-201ENST00000282516 IGHV4-61A0A0C4DH41 118 aa6.64□□□□□ -1.35
NIPBL-201ENST00000282516 IGLV3-1P01715 115 aa6.64□□□□□ -1.35
NIPBL-201ENST00000282516 PRAC2D3DTV9 90 aa6.64□□□□□ -1.35
NIPBL-201ENST00000282516 WFDC13Q8IUB5 93 aa6.63□□□□□ -1.35
NIPBL-201ENST00000282516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.63□□□□□ -1.35
NIPBL-201ENST00000282516 ADAMTS20P59510 1910 aa6.63□□□□□ -1.35
NIPBL-201ENST00000282516 NUPR1O60356 82 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms