RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 SPATA25Q9BR10 227 aa8.36□□□□□ -1.07
SSRP1-201ENST00000278412 MEGF8Q7Z7M0 2845 aa8.36□□□□□ -1.07
SSRP1-201ENST00000278412 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
SSRP1-201ENST00000278412 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
SSRP1-201ENST00000278412 TEX48A0A1B0GUV7 120 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 A6NDN8 102 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 H3BUT2 72 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 COX8AP10176 69 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 EGFEM1PQ0D2K5 195 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 MRAP2Q96G30 205 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 LINC00467Q9BRT7 94 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 IGHV3-38A0A0C4DH36 116 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 LOC100131303A0A0U1RQF7 123 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 SUMO2P61956 95 aaKnown RBP8.35□□□□□ -1.07
SSRP1-201ENST00000278412 MTURNQ8N3F0 131 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 OR11H2Q8NH07 326 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 HUWE1Q7Z6Z7 4374 aaKnown RBP8.35□□□□□ -1.07
SSRP1-201ENST00000278412 C1QTNF4Q9BXJ3 329 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 CELA1Q9UNI1 258 aa8.35□□□□□ -1.07
SSRP1-201ENST00000278412 PRKDCP78527 4128 aaKnown RBP8.34□□□□□ -1.07
SSRP1-201ENST00000278412 A0A1W2PPM0 123 aa8.34□□□□□ -1.07
SSRP1-201ENST00000278412 TSPAN13O95857 204 aa8.34□□□□□ -1.07
SSRP1-201ENST00000278412 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
SSRP1-201ENST00000278412 SMIM2Q9BVW6 85 aa8.34□□□□□ -1.07
SSRP1-201ENST00000278412 SPCS1Q9Y6A9 102 aa8.34□□□□□ -1.07
SSRP1-201ENST00000278412 IGHV4-28A0A0C4DH34 117 aa8.33□□□□□ -1.08
SSRP1-201ENST00000278412 PGPEP1Q9NXJ5 209 aa8.33□□□□□ -1.08
SSRP1-201ENST00000278412 SDHAF1A6NFY7 115 aa8.33□□□□□ -1.08
SSRP1-201ENST00000278412 RPL24P83731 157 aaKnown RBP8.33□□□□□ -1.08
SSRP1-201ENST00000278412 PHLDA1Q8WV24 401 aaPredicted RBP8.33□□□□□ -1.08
SSRP1-201ENST00000278412 CHCHD1Q96BP2 118 aaKnown RBP8.33□□□□□ -1.08
SSRP1-201ENST00000278412 Q8N8P6 123 aa8.32□□□□□ -1.08
SSRP1-201ENST00000278412 MRAPQ8TCY5 172 aa8.32□□□□□ -1.08
SSRP1-201ENST00000278412 C16orf74Q96GX8 76 aa8.32□□□□□ -1.08
SSRP1-201ENST00000278412 GEMIN7Q9H840 131 aaKnown RBP8.32□□□□□ -1.08
SSRP1-201ENST00000278412 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
SSRP1-201ENST00000278412 RS1O15537 224 aa8.32□□□□□ -1.08
SSRP1-201ENST00000278412 TCTAP57738 103 aa8.32□□□□□ -1.08
SSRP1-201ENST00000278412 RPL39P62891 51 aaKnown RBP8.32□□□□□ -1.08
SSRP1-201ENST00000278412 ZC2HC1BQ5TFG8 222 aa8.32□□□□□ -1.08
SSRP1-201ENST00000278412 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
SSRP1-201ENST00000278412 FAM222AQ5U5X8 452 aa8.31□□□□□ -1.08
SSRP1-201ENST00000278412 SPXQ9BT56 116 aa8.31□□□□□ -1.08
SSRP1-201ENST00000278412 A8MWV9 139 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 J3QR89 54 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 POLR2KP53803 58 aaKnown RBP8.3□□□□□ -1.08
SSRP1-201ENST00000278412 DAZ2Q13117 558 aaKnown RBP8.3□□□□□ -1.08
SSRP1-201ENST00000278412 Q8NAQ8 132 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 FGF6P10767 208 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 TENM2Q9NT68 2774 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 K7EIL1 84 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 FABP2P12104 132 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 APOC4P55056 127 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 LINC01545Q5VT33 79 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 OPRPNQ99935 248 aaPredicted RBP8.3□□□□□ -1.08
SSRP1-201ENST00000278412 NAA38Q9BRA0 125 aaKnown RBP8.3□□□□□ -1.08
SSRP1-201ENST00000278412 OVOL2Q9BRP0 275 aa8.3□□□□□ -1.08
SSRP1-201ENST00000278412 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
SSRP1-201ENST00000278412 MAP1LC3CQ9BXW4 147 aa8.29□□□□□ -1.08
SSRP1-201ENST00000278412 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
SSRP1-201ENST00000278412 KIR2DL5BQ8NHK3 375 aa8.29□□□□□ -1.08
SSRP1-201ENST00000278412 DNAH9Q9NYC9 4486 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 HBDP02042 147 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 LAGE3Q14657 143 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 CEMP1Q6PRD7 247 aaPredicted RBP8.28□□□□□ -1.08
SSRP1-201ENST00000278412 RNF183Q96D59 192 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
SSRP1-201ENST00000278412 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 TSHBP01222 138 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 GAGE4Q13068 117 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 GAGE5Q13069 117 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 GAGE13Q4V321 117 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 ZNRF2Q8NHG8 242 aa8.28□□□□□ -1.08
SSRP1-201ENST00000278412 DEFB121Q5J5C9 76 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 C20orf78Q9BR46 151 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 A0A096LPF7 62 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 LINC01546A6NGU7 62 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.27□□□□□ -1.09
SSRP1-201ENST00000278412 SIVA1O15304 175 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 FCER1GP30273 86 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 FHL2Q14192 279 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 ZFP2Q6ZN57 461 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 TGP01266 2768 aa8.27□□□□□ -1.09
SSRP1-201ENST00000278412 TRAV4A0A0B4J268 109 aa8.26□□□□□ -1.09
SSRP1-201ENST00000278412 DKK2Q9UBU2 259 aa8.26□□□□□ -1.09
SSRP1-201ENST00000278412 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
SSRP1-201ENST00000278412 LYSTQ99698 3801 aa8.26□□□□□ -1.09
SSRP1-201ENST00000278412 LGALS9BQ3B8N2 356 aa8.26□□□□□ -1.09
SSRP1-201ENST00000278412 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
SSRP1-201ENST00000278412 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
SSRP1-201ENST00000278412 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
SSRP1-201ENST00000278412 A0A0J9YY99 117 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 TRBV27A0A0K0K1C4 114 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 HTN3P15516 51 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 PTH2Q96A98 100 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 F8W1H4 67 aa8.25□□□□□ -1.09
SSRP1-201ENST00000278412 TP53TG1Q9Y2A0 90 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms