RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 ZNF256Q9Y2P7 627 aaPredicted RBP6.42□□□□□ -1.38
TRIM43-201ENST00000272395 TRRAPQ9Y4A5 3859 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 A0A087WWL8 130 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 TRAV2A0A0B4J234 112 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 A8MTW9 85 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 SAP30O75446 220 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 EDN2P20800 178 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 COTL1Q14019 142 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 ZNF876PQ49A33 203 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 PIK3CD-AS1Q5SR53 167 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 NFE4Q86UQ8 179 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 LINC00482Q8N8I6 264 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 JPT2Q9H910 190 aa6.41□□□□□ -1.38
TRIM43-201ENST00000272395 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
TRIM43-201ENST00000272395 HOXD3P31249 432 aaPredicted RBP6.4□□□□□ -1.38
TRIM43-201ENST00000272395 SYNJ2BPP57105 145 aa6.4□□□□□ -1.38
TRIM43-201ENST00000272395 FHL3Q13643 280 aa6.4□□□□□ -1.38
TRIM43-201ENST00000272395 DLX4Q92988 240 aaPredicted RBP6.4□□□□□ -1.38
TRIM43-201ENST00000272395 MDFICQ9P1T7 246 aa6.4□□□□□ -1.38
TRIM43-201ENST00000272395 PKD1L1Q8TDX9 2849 aa6.4□□□□□ -1.38
TRIM43-201ENST00000272395 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 J3QR89 54 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 UBE2D1P51668 147 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 SRSF9Q13242 221 aaKnown RBP eCLIP6.39□□□□□ -1.39
TRIM43-201ENST00000272395 ZNF56Q15929 161 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 CD300EQ496F6 205 aaPredicted RBP6.39□□□□□ -1.39
TRIM43-201ENST00000272395 LYRM7Q5U5X0 104 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 AMTNQ6UX39 209 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 PTH2Q96A98 100 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 TRAV12-2A0A075B6T6 113 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 I3L3M4 83 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 CRYBA4P53673 196 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 RPL39P62891 51 aaKnown RBP6.39□□□□□ -1.39
TRIM43-201ENST00000272395 SPINK13Q1W4C9 94 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 FAM74A4Q5TZK3 123 aa6.39□□□□□ -1.39
TRIM43-201ENST00000272395 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
TRIM43-201ENST00000272395 A0A0J9YY99 117 aa6.38□□□□□ -1.39
TRIM43-201ENST00000272395 RPL24P83731 157 aaKnown RBP6.38□□□□□ -1.39
TRIM43-201ENST00000272395 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
TRIM43-201ENST00000272395 SLC25A29Q8N8R3 303 aa6.38□□□□□ -1.39
TRIM43-201ENST00000272395 C20orf203Q8NBC4 194 aa6.38□□□□□ -1.39
TRIM43-201ENST00000272395 SELENOKQ9Y6D0 94 aa6.38□□□□□ -1.39
TRIM43-201ENST00000272395 CMYA5Q8N3K9 4069 aa6.38□□□□□ -1.39
TRIM43-201ENST00000272395 WNK1Q9H4A3 2382 aa6.37□□□□□ -1.39
TRIM43-201ENST00000272395 J3QQQ9 107 aa6.37□□□□□ -1.39
TRIM43-201ENST00000272395 LEPROTO15243 131 aa6.37□□□□□ -1.39
TRIM43-201ENST00000272395 IGKV3-20P01619 116 aa6.37□□□□□ -1.39
TRIM43-201ENST00000272395 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
TRIM43-201ENST00000272395 PLEKHB2Q96CS7 222 aa6.37□□□□□ -1.39
TRIM43-201ENST00000272395 SPAG8Q99932 426 aaPredicted RBP6.37□□□□□ -1.39
TRIM43-201ENST00000272395 MRPL16Q9NX20 251 aaKnown RBP6.37□□□□□ -1.39
TRIM43-201ENST00000272395 PYGO1Q9Y3Y4 419 aa6.37□□□□□ -1.39
TRIM43-201ENST00000272395 TEX48A0A1B0GUV7 120 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 A8MWV9 139 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 LGALS3P17931 250 aaKnown RBP6.36□□□□□ -1.39
TRIM43-201ENST00000272395 WFDC9Q8NEX5 89 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 ZNRF2Q8NHG8 242 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 PEMTQ9UBM1 199 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 TMEM223A0PJW6 202 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 H3BMG7 143 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 M0R2P5 195 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 P0DMU3 169 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 FAM231AP0DMU4 169 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 FAM231CP0DMU5 169 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 AMELXQ99217 191 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 VCX2Q9H322 139 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 PRO0461Q9UI25 63 aa6.36□□□□□ -1.39
TRIM43-201ENST00000272395 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 H3BMM0 161 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 IGHV3-30P01768 117 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 IGHV3-30-5P0DP03 117 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 UBE2D3P61077 147 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 UBE2D2P62837 147 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 ZNF415Q09FC8 603 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 WFDC2Q14508 124 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 ATP6V0E2Q8NHE4 81 aa6.35□□□□□ -1.39
TRIM43-201ENST00000272395 IGLV4-3A0A075B6K6 122 aa6.34□□□□□ -1.39
TRIM43-201ENST00000272395 TRBV20-1A0A075B6N2 111 aa6.34□□□□□ -1.39
TRIM43-201ENST00000272395 RHODO00212 210 aa6.34□□□□□ -1.39
TRIM43-201ENST00000272395 EMP1P54849 157 aa6.34□□□□□ -1.39
TRIM43-201ENST00000272395 TSPEAR-AS2P59090 65 aa6.34□□□□□ -1.39
TRIM43-201ENST00000272395 SPXQ9BT56 116 aa6.34□□□□□ -1.39
TRIM43-201ENST00000272395 TSPAN13O95857 204 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 ZNF22P17026 224 aaPredicted RBP6.33□□□□□ -1.4
TRIM43-201ENST00000272395 DEFB131AP59861 70 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 DNAJC30Q96LL9 226 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 MGAM2Q2M2H8 2515 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 KNCNA6PVL3 124 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 TMEM238C9JI98 176 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 RBMY1A1P0DJD3 496 aaKnown RBP6.33□□□□□ -1.4
TRIM43-201ENST00000272395 RBMY1CP0DJD4 496 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 MRPS36P82909 103 aaKnown RBP6.33□□□□□ -1.4
TRIM43-201ENST00000272395 RBMY1FQ15415 496 aaKnown RBP6.33□□□□□ -1.4
TRIM43-201ENST00000272395 C10orf126Q8N4M7 172 aa6.33□□□□□ -1.4
TRIM43-201ENST00000272395 SPANXA1Q9NS26 97 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms