RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 ICOSQ9Y6W8 199 aa13.7□□□□□ -0.22
CNIH3-201ENST00000272133 PSMB8P28062 276 aa13.7□□□□□ -0.22
CNIH3-201ENST00000272133 TRAV8-4A0A0B4J246 113 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 H3BMM0 161 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 RBMY1A1P0DJD3 496 aaKnown RBP13.69□□□□□ -0.22
CNIH3-201ENST00000272133 RBMY1CP0DJD4 496 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 RBMY1FQ15415 496 aaKnown RBP13.69□□□□□ -0.22
CNIH3-201ENST00000272133 UBE2WQ96B02 151 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 PYGO1Q9Y3Y4 419 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 IGHV1-58A0A0C4DH39 117 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 NDUFV3P56181 108 aaKnown RBP13.69□□□□□ -0.22
CNIH3-201ENST00000272133 GAGE5Q13069 117 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 GAGE6Q13070 117 aa13.69□□□□□ -0.22
CNIH3-201ENST00000272133 B5MCH6 92 aa13.68□□□□□ -0.22
CNIH3-201ENST00000272133 C2orf82Q6UX34 121 aa13.68□□□□□ -0.22
CNIH3-201ENST00000272133 H7C423 109 aa13.68□□□□□ -0.22
CNIH3-201ENST00000272133 LINC01600Q96MT4 127 aa13.68□□□□□ -0.22
CNIH3-201ENST00000272133 PRM2P04554 102 aa13.67□□□□□ -0.22
CNIH3-201ENST00000272133 CLEC2BQ92478 149 aa13.67□□□□□ -0.22
CNIH3-201ENST00000272133 DUX5Q96PT3 197 aa13.67□□□□□ -0.22
CNIH3-201ENST00000272133 KNCNA6PVL3 124 aa13.67□□□□□ -0.22
CNIH3-201ENST00000272133 SPANXDQ9BXN6 97 aa13.67□□□□□ -0.22
CNIH3-201ENST00000272133 SPANXCQ9NY87 97 aa13.67□□□□□ -0.22
CNIH3-201ENST00000272133 FLNCQ14315 2725 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 CSMD2Q7Z408 3487 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 SYNJ2BPP57105 145 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 MIAQ16674 131 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 AVPP01185 164 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 C15orf53Q8NAA6 179 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 VSIG2Q96IQ7 327 aa13.66□□□□□ -0.22
CNIH3-201ENST00000272133 ACACBO00763 2458 aa13.65□□□□□ -0.22
CNIH3-201ENST00000272133 C10orf105Q8TEF2 133 aa13.65□□□□□ -0.22
CNIH3-201ENST00000272133 DAND5Q8N907 189 aa13.64□□□□□ -0.23
CNIH3-201ENST00000272133 TNFRSF18Q9Y5U5 241 aa13.64□□□□□ -0.23
CNIH3-201ENST00000272133 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.64□□□□□ -0.23
CNIH3-201ENST00000272133 IGHV4-30-2A0A087WSY4 118 aa13.64□□□□□ -0.23
CNIH3-201ENST00000272133 IGKV2-29A2NJV5 120 aaPredicted RBP13.64□□□□□ -0.23
CNIH3-201ENST00000272133 NACAE9PAV3 2078 aa13.64□□□□□ -0.23
CNIH3-201ENST00000272133 TTC32Q5I0X7 151 aa13.64□□□□□ -0.23
CNIH3-201ENST00000272133 IFITM1P13164 125 aa13.63□□□□□ -0.23
CNIH3-201ENST00000272133 Q6ZSN1 163 aa13.63□□□□□ -0.23
CNIH3-201ENST00000272133 UTP20O75691 2785 aaKnown RBP13.63□□□□□ -0.23
CNIH3-201ENST00000272133 COX6CP09669 75 aa13.63□□□□□ -0.23
CNIH3-201ENST00000272133 TMEM61Q8N0U2 210 aa13.63□□□□□ -0.23
CNIH3-201ENST00000272133 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
CNIH3-201ENST00000272133 CCDC179H3BU77 68 aa13.62□□□□□ -0.23
CNIH3-201ENST00000272133 CHCHD7Q9BUK0 85 aa13.62□□□□□ -0.23
CNIH3-201ENST00000272133 UBE2D4Q9Y2X8 147 aa13.62□□□□□ -0.23
CNIH3-201ENST00000272133 MSMBP08118 114 aa13.62□□□□□ -0.23
CNIH3-201ENST00000272133 EDA2RQ9HAV5 297 aa13.62□□□□□ -0.23
CNIH3-201ENST00000272133 IGHV4-59P01825 116 aa13.61□□□□□ -0.23
CNIH3-201ENST00000272133 H3BT86 120 aa13.6□□□□□ -0.23
CNIH3-201ENST00000272133 CCL19Q99731 98 aa13.6□□□□□ -0.23
CNIH3-201ENST00000272133 IGHV3-38A0A0C4DH36 116 aa13.6□□□□□ -0.23
CNIH3-201ENST00000272133 LST1O00453 97 aa13.6□□□□□ -0.23
CNIH3-201ENST00000272133 Q6Q795 121 aa13.6□□□□□ -0.23
CNIH3-201ENST00000272133 DUX3Q96PT4 197 aa13.6□□□□□ -0.23
CNIH3-201ENST00000272133 LINC00467Q9BRT7 94 aa13.6□□□□□ -0.23
CNIH3-201ENST00000272133 USP9XQ93008 2570 aaPredicted RBP13.59□□□□□ -0.23
CNIH3-201ENST00000272133 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 GAGE7O76087 117 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 GAGE12FP0CL80 117 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 GAGE12GP0CL81 117 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 GAGE12IP0CL82 117 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 GAGE4Q13068 117 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 SPANXA1Q9NS26 97 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 CDKN2A-AS1Q9UH64 79 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 USP24Q9UPU5 2620 aa13.58□□□□□ -0.24
CNIH3-201ENST00000272133 ATP5J2P56134 94 aa13.57□□□□□ -0.24
CNIH3-201ENST00000272133 RNF152Q8N8N0 203 aa13.57□□□□□ -0.24
CNIH3-201ENST00000272133 CUBNO60494 3623 aa13.57□□□□□ -0.24
CNIH3-201ENST00000272133 HOXD3P31249 432 aaPredicted RBP13.57□□□□□ -0.24
CNIH3-201ENST00000272133 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.56□□□□□ -0.24
CNIH3-201ENST00000272133 DEFB112Q30KQ8 113 aa13.56□□□□□ -0.24
CNIH3-201ENST00000272133 YAE1D1Q9NRH1 226 aa13.56□□□□□ -0.24
CNIH3-201ENST00000272133 DEFB131AP59861 70 aa13.55□□□□□ -0.24
CNIH3-201ENST00000272133 RBMY1BA6NDE4 496 aaKnown RBP13.55□□□□□ -0.24
CNIH3-201ENST00000272133 RBMY1EA6NEQ0 496 aaKnown RBP13.55□□□□□ -0.24
CNIH3-201ENST00000272133 RBMY1DP0C7P1 496 aaKnown RBP13.55□□□□□ -0.24
CNIH3-201ENST00000272133 CITED2Q99967 270 aaPredicted RBP13.54□□□□□ -0.24
CNIH3-201ENST00000272133 ZFYVE26Q68DK2 2539 aa13.54□□□□□ -0.24
CNIH3-201ENST00000272133 ZANQ9Y493 2812 aa13.54□□□□□ -0.24
CNIH3-201ENST00000272133 DOPEY1Q5JWR5 2465 aa13.54□□□□□ -0.24
CNIH3-201ENST00000272133 TMEM101Q96IK0 257 aa13.54□□□□□ -0.24
CNIH3-201ENST00000272133 A0A0U1RRA0 63 aa13.53□□□□□ -0.24
CNIH3-201ENST00000272133 PRB1P04280 392 aa13.53□□□□□ -0.24
CNIH3-201ENST00000272133 TIMM17BO60830 172 aa13.52□□□□□ -0.24
CNIH3-201ENST00000272133 ZNF625Q96I27 306 aaPredicted RBP13.52□□□□□ -0.24
CNIH3-201ENST00000272133 NDUFA1O15239 70 aa13.52□□□□□ -0.25
CNIH3-201ENST00000272133 COX6A2Q02221 97 aa13.52□□□□□ -0.25
CNIH3-201ENST00000272133 FAM240AA0A1B0GVK7 77 aa13.51□□□□□ -0.25
CNIH3-201ENST00000272133 DEFB121Q5J5C9 76 aa13.51□□□□□ -0.25
CNIH3-201ENST00000272133 B4DSR2 109 aa13.51□□□□□ -0.25
CNIH3-201ENST00000272133 ZNF415Q09FC8 603 aa13.51□□□□□ -0.25
CNIH3-201ENST00000272133 DEFB136Q30KP8 78 aa13.5□□□□□ -0.25
CNIH3-201ENST00000272133 BBC3Q96PG8 261 aaPredicted RBP13.5□□□□□ -0.25
CNIH3-201ENST00000272133 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
CNIH3-201ENST00000272133 Q9H8V8 135 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms