RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
SDE2-201ENST00000272091 MRPL35Q9NZE8 188 aaKnown RBP8.59□□□□□ -1.03
SDE2-201ENST00000272091 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
SDE2-201ENST00000272091 HHLA3Q9XRX5 114 aa8.58□□□□□ -1.04
SDE2-201ENST00000272091 NBEAL2Q6ZNJ1 2754 aa8.58□□□□□ -1.04
SDE2-201ENST00000272091 TRGV2A0A075B6R0 118 aa8.58□□□□□ -1.04
SDE2-201ENST00000272091 FHL2Q14192 279 aa8.58□□□□□ -1.04
SDE2-201ENST00000272091 PHLDA1Q8WV24 401 aaPredicted RBP8.58□□□□□ -1.04
SDE2-201ENST00000272091 Q8NAQ8 132 aa8.58□□□□□ -1.04
SDE2-201ENST00000272091 LOC100131303A0A0U1RQF7 123 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 OR11H2Q8NH07 326 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 DEFB4AO15263 64 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 DLEU1O43261 78 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 ZNRF2Q8NHG8 242 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
SDE2-201ENST00000272091 Q6ZN92 141 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 RNF183Q96D59 192 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 TIMM17AQ99595 171 aa8.57□□□□□ -1.04
SDE2-201ENST00000272091 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
SDE2-201ENST00000272091 TRBV10-1A0A0K0K1A3 114 aa8.56□□□□□ -1.04
SDE2-201ENST00000272091 DEFB130BP0DP73 79 aa8.56□□□□□ -1.04
SDE2-201ENST00000272091 DEFB130AP0DP74 79 aa8.56□□□□□ -1.04
SDE2-201ENST00000272091 UBE2D3P61077 147 aa8.56□□□□□ -1.04
SDE2-201ENST00000272091 UBE2D2P62837 147 aa8.56□□□□□ -1.04
SDE2-201ENST00000272091 GAGE1Q13065 139 aa8.56□□□□□ -1.04
SDE2-201ENST00000272091 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 A8MZ25 164 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 IGKCP01834 107 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 TCTAP57738 103 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 COL6A5A8TX70 2615 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 M0R143 59 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 FAM222AQ5U5X8 452 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 TMEM141Q96I45 108 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 UQCR10Q9UDW1 63 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 CELA1Q9UNI1 258 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 LINC00694P0DN24 101 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 NTM-AS1Q6ZSK4 140 aa8.55□□□□□ -1.04
SDE2-201ENST00000272091 TRBV6-4A0A1B0GX49 114 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 GAGE12JA6NER3 117 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 DPM2O94777 84 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 ZNF25P17030 456 aaPredicted RBP8.54□□□□□ -1.04
SDE2-201ENST00000272091 GAGE4Q13068 117 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 GAGE5Q13069 117 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 GAGE13Q4V321 117 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 F8VRH5 84 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 FGF6P10767 208 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 CEMP1Q6PRD7 247 aaPredicted RBP8.54□□□□□ -1.04
SDE2-201ENST00000272091 CHTOPQ9Y3Y2 248 aaKnown RBP8.54□□□□□ -1.04
SDE2-201ENST00000272091 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 LINC01549A6NIU2 74 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 CIDEAO60543 219 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 MDFIQ99750 246 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 CST9LQ9H4G1 147 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 HSBP1L1C9JCN9 74 aa8.54□□□□□ -1.04
SDE2-201ENST00000272091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.53□□□□□ -1.04
SDE2-201ENST00000272091 IGKV2-29A2NJV5 120 aaPredicted RBP8.53□□□□□ -1.04
SDE2-201ENST00000272091 TRGV4A0A0C4DH28 118 aa8.53□□□□□ -1.04
SDE2-201ENST00000272091 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
SDE2-201ENST00000272091 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
SDE2-201ENST00000272091 RETNQ9HD89 108 aa8.53□□□□□ -1.04
SDE2-201ENST00000272091 LYRM9A8MSI8 78 aa8.53□□□□□ -1.04
SDE2-201ENST00000272091 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
SDE2-201ENST00000272091 UBE2D4Q9Y2X8 147 aa8.53□□□□□ -1.04
SDE2-201ENST00000272091 MIFP14174 115 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 PTTG1IPP53801 180 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 PMVKQ15126 192 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 COX8AP10176 69 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 COTL1Q14019 142 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 SBSPONQ8IVN8 264 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 PYGO1Q9Y3Y4 419 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 CCL25O15444 150 aa8.52□□□□□ -1.05
SDE2-201ENST00000272091 PLNP26678 52 aa8.51□□□□□ -1.05
SDE2-201ENST00000272091 DAZ4Q86SG3 579 aaKnown RBP8.51□□□□□ -1.05
SDE2-201ENST00000272091 DAZ3Q9NR90 486 aaKnown RBP8.51□□□□□ -1.05
SDE2-201ENST00000272091 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
SDE2-201ENST00000272091 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
SDE2-201ENST00000272091 AMELXQ99217 191 aa8.5□□□□□ -1.05
SDE2-201ENST00000272091 C2orf91Q6ZV80 131 aa8.5□□□□□ -1.05
SDE2-201ENST00000272091 CRYBA4P53673 196 aa8.5□□□□□ -1.05
SDE2-201ENST00000272091 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
SDE2-201ENST00000272091 HNRNPA3P51991 378 aaKnown RBP8.49□□□□□ -1.05
SDE2-201ENST00000272091 RNASE13Q5GAN3 156 aaKnown RBP8.49□□□□□ -1.05
SDE2-201ENST00000272091 SLC25A34Q6PIV7 304 aa8.49□□□□□ -1.05
SDE2-201ENST00000272091 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
SDE2-201ENST00000272091 PRB2P02812 416 aaPredicted RBP8.48□□□□□ -1.05
SDE2-201ENST00000272091 Q6ZUT4 128 aa8.48□□□□□ -1.05
SDE2-201ENST00000272091 GTSF1LQ9H1H1 148 aa8.48□□□□□ -1.05
SDE2-201ENST00000272091 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
SDE2-201ENST00000272091 NMUP48645 174 aa8.48□□□□□ -1.05
SDE2-201ENST00000272091 RBX1P62877 108 aa8.48□□□□□ -1.05
SDE2-201ENST00000272091 VSIG2Q96IQ7 327 aa8.48□□□□□ -1.05
SDE2-201ENST00000272091 MRPS16Q9Y3D3 137 aaKnown RBP8.48□□□□□ -1.05
SDE2-201ENST00000272091 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
SDE2-201ENST00000272091 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
SDE2-201ENST00000272091 DAD1P61803 113 aa8.46□□□□□ -1.05
SDE2-201ENST00000272091 MAPKAPK5-AS1Q8N8E1 139 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms