RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TMEM141Q96I45 108 aa12.21□□□□□ -0.45
CHKA-201ENST00000265689 TIMM17AQ99595 171 aa12.21□□□□□ -0.45
CHKA-201ENST00000265689 BEAN1Q3B7T3 259 aa12.21□□□□□ -0.45
CHKA-201ENST00000265689 RAB37Q96AX2 223 aa12.21□□□□□ -0.45
CHKA-201ENST00000265689 OPRPNQ99935 248 aaPredicted RBP12.21□□□□□ -0.45
CHKA-201ENST00000265689 PMVKQ15126 192 aa12.2□□□□□ -0.46
CHKA-201ENST00000265689 IGLV4-69A0A075B6H9 119 aa12.2□□□□□ -0.46
CHKA-201ENST00000265689 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
CHKA-201ENST00000265689 H3BUT2 72 aa12.2□□□□□ -0.46
CHKA-201ENST00000265689 C19orf73Q9NVV2 129 aa12.2□□□□□ -0.46
CHKA-201ENST00000265689 GIG44P09565 113 aaPredicted RBP12.19□□□□□ -0.46
CHKA-201ENST00000265689 RPL35AP18077 110 aaKnown RBP12.19□□□□□ -0.46
CHKA-201ENST00000265689 TNFRSF18Q9Y5U5 241 aa12.19□□□□□ -0.46
CHKA-201ENST00000265689 GAGE10A6NGK3 116 aa12.19□□□□□ -0.46
CHKA-201ENST00000265689 NDUFA11Q86Y39 141 aa12.19□□□□□ -0.46
CHKA-201ENST00000265689 C20orf203Q8NBC4 194 aa12.19□□□□□ -0.46
CHKA-201ENST00000265689 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
CHKA-201ENST00000265689 CMC4P56277 68 aaPredicted RBP12.18□□□□□ -0.46
CHKA-201ENST00000265689 CHAC1Q9BUX1 264 aa12.18□□□□□ -0.46
CHKA-201ENST00000265689 RS1O15537 224 aa12.18□□□□□ -0.46
CHKA-201ENST00000265689 VPS25Q9BRG1 176 aa12.18□□□□□ -0.46
CHKA-201ENST00000265689 HIGD1BQ9P298 99 aa12.18□□□□□ -0.46
CHKA-201ENST00000265689 ANK2Q01484 3957 aa12.18□□□□□ -0.46
CHKA-201ENST00000265689 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
CHKA-201ENST00000265689 A6NDN8 102 aa12.17□□□□□ -0.46
CHKA-201ENST00000265689 C9orf118A6NHY6 69 aa12.17□□□□□ -0.46
CHKA-201ENST00000265689 H3BRM9 83 aa12.17□□□□□ -0.46
CHKA-201ENST00000265689 RHODO00212 210 aa12.17□□□□□ -0.46
CHKA-201ENST00000265689 TRGV1A0A0A0MS02 117 aa12.16□□□□□ -0.46
CHKA-201ENST00000265689 PF4P02776 101 aa12.16□□□□□ -0.46
CHKA-201ENST00000265689 OR11H2Q8NH07 326 aa12.16□□□□□ -0.46
CHKA-201ENST00000265689 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
CHKA-201ENST00000265689 FAM110AQ9BQ89 295 aa12.15□□□□□ -0.46
CHKA-201ENST00000265689 PRADC1Q9BSG0 188 aa12.15□□□□□ -0.46
CHKA-201ENST00000265689 E9PLD3 99 aa12.15□□□□□ -0.46
CHKA-201ENST00000265689 CMYA5Q8N3K9 4069 aa12.14□□□□□ -0.47
CHKA-201ENST00000265689 Q6ZTI0 123 aa12.14□□□□□ -0.47
CHKA-201ENST00000265689 LINC00482Q8N8I6 264 aa12.14□□□□□ -0.47
CHKA-201ENST00000265689 ZNRF2Q8NHG8 242 aa12.14□□□□□ -0.47
CHKA-201ENST00000265689 GCSHP23434 173 aa12.14□□□□□ -0.47
CHKA-201ENST00000265689 TMEM263Q8WUH6 116 aaKnown RBP12.14□□□□□ -0.47
CHKA-201ENST00000265689 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
CHKA-201ENST00000265689 PHLDA1Q8WV24 401 aaPredicted RBP12.13□□□□□ -0.47
CHKA-201ENST00000265689 IGLV4-3A0A075B6K6 122 aa12.13□□□□□ -0.47
CHKA-201ENST00000265689 MYMXA0A1B0GTQ4 84 aa12.13□□□□□ -0.47
CHKA-201ENST00000265689 ZNF479Q96JC4 524 aa12.13□□□□□ -0.47
CHKA-201ENST00000265689 FXYD2P54710 66 aa12.12□□□□□ -0.47
CHKA-201ENST00000265689 PAPPA-AS1Q5QFB9 102 aa12.12□□□□□ -0.47
CHKA-201ENST00000265689 CEMP1Q6PRD7 247 aaPredicted RBP12.12□□□□□ -0.47
CHKA-201ENST00000265689 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
CHKA-201ENST00000265689 GTF2H5Q6ZYL4 71 aa12.12□□□□□ -0.47
CHKA-201ENST00000265689 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
CHKA-201ENST00000265689 K7EP34 96 aa12.11□□□□□ -0.47
CHKA-201ENST00000265689 CHCHD7Q9BUK0 85 aa12.11□□□□□ -0.47
CHKA-201ENST00000265689 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
CHKA-201ENST00000265689 CSNK1G2-AS1Q8NCQ2 148 aa12.1□□□□□ -0.47
CHKA-201ENST00000265689 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
CHKA-201ENST00000265689 VCX2Q9H322 139 aa12.1□□□□□ -0.47
CHKA-201ENST00000265689 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
CHKA-201ENST00000265689 K7ERJ3 54 aa12.1□□□□□ -0.47
CHKA-201ENST00000265689 A0A1W2PPM0 123 aa12.09□□□□□ -0.47
CHKA-201ENST00000265689 K7ERU9 68 aa12.09□□□□□ -0.47
CHKA-201ENST00000265689 CEND1Q8N111 149 aa12.09□□□□□ -0.47
CHKA-201ENST00000265689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
CHKA-201ENST00000265689 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
CHKA-201ENST00000265689 ZNF815PA8K554 130 aa12.09□□□□□ -0.47
CHKA-201ENST00000265689 HERVK_113P61574 105 aa12.09□□□□□ -0.47
CHKA-201ENST00000265689 PYGO1Q9Y3Y4 419 aa12.09□□□□□ -0.47
CHKA-201ENST00000265689 RNASE13Q5GAN3 156 aaKnown RBP12.08□□□□□ -0.48
CHKA-201ENST00000265689 NFE4Q86UQ8 179 aa12.08□□□□□ -0.48
CHKA-201ENST00000265689 C1QTNF4Q9BXJ3 329 aa12.08□□□□□ -0.48
CHKA-201ENST00000265689 SPCS1Q9Y6A9 102 aa12.08□□□□□ -0.48
CHKA-201ENST00000265689 A0A0J9YXV3 536 aa12.08□□□□□ -0.48
CHKA-201ENST00000265689 KRTAP24-1Q3LI83 254 aa12.08□□□□□ -0.48
CHKA-201ENST00000265689 C16orf74Q96GX8 76 aa12.08□□□□□ -0.48
CHKA-201ENST00000265689 NOTCH1P46531 2555 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 DAZ2Q13117 558 aaKnown RBP12.07□□□□□ -0.48
CHKA-201ENST00000265689 COTL1Q14019 142 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 PRIMA1Q86XR5 153 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 PLEKHB2Q96CS7 222 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 HIST1H4GQ99525 98 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 TM2D2Q9BX73 214 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 TRAV4A0A0B4J268 109 aa12.07□□□□□ -0.48
CHKA-201ENST00000265689 SMIM13P0DJ93 91 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 GAGE7O76087 117 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 GAGE12FP0CL80 117 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 GAGE12GP0CL81 117 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 GAGE12IP0CL82 117 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 RRN3P1Q2M238 152 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 SAMD5Q5TGI4 173 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 AMELXQ99217 191 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 UBE2D4Q9Y2X8 147 aa12.06□□□□□ -0.48
CHKA-201ENST00000265689 TAL2Q16559 108 aa12.05□□□□□ -0.48
CHKA-201ENST00000265689 TRBV7-3A0A075B6L6 115 aa12.05□□□□□ -0.48
CHKA-201ENST00000265689 K7EQD1 137 aa12.05□□□□□ -0.48
CHKA-201ENST00000265689 ZNF22P17026 224 aaPredicted RBP12.05□□□□□ -0.48
CHKA-201ENST00000265689 SLC25A29Q8N8R3 303 aa12.05□□□□□ -0.48
CHKA-201ENST00000265689 SCGB1D4Q6XE38 83 aa12.04□□□□□ -0.48
CHKA-201ENST00000265689 NHP2Q9NX24 153 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms