RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 CRYBA4P53673 196 aa16.81■□□□□ 0.28
EPCAM-201ENST00000263735 GAGE1Q13065 139 aa16.81■□□□□ 0.28
EPCAM-201ENST00000263735 GAGE4Q13068 117 aa16.81■□□□□ 0.28
EPCAM-201ENST00000263735 GAGE5Q13069 117 aa16.81■□□□□ 0.28
EPCAM-201ENST00000263735 COTL1Q14019 142 aa16.81■□□□□ 0.28
EPCAM-201ENST00000263735 GAGE13Q4V321 117 aa16.81■□□□□ 0.28
EPCAM-201ENST00000263735 PHLDA1Q8WV24 401 aaPredicted RBP16.81■□□□□ 0.28
EPCAM-201ENST00000263735 CDPF1Q6NVV7 123 aa16.79■□□□□ 0.28
EPCAM-201ENST00000263735 IGHV3-38A0A0C4DH36 116 aa16.79■□□□□ 0.28
EPCAM-201ENST00000263735 LOC100131303A0A0U1RQF7 123 aa16.79■□□□□ 0.28
EPCAM-201ENST00000263735 C20orf202A1L168 122 aa16.79■□□□□ 0.28
EPCAM-201ENST00000263735 ERASQ7Z444 233 aa16.79■□□□□ 0.28
EPCAM-201ENST00000263735 C20orf203Q8NBC4 194 aa16.79■□□□□ 0.28
EPCAM-201ENST00000263735 SCGB3A1Q96QR1 104 aa16.79■□□□□ 0.28
EPCAM-201ENST00000263735 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.78■□□□□ 0.28
EPCAM-201ENST00000263735 LINC00694P0DN24 101 aa16.78■□□□□ 0.28
EPCAM-201ENST00000263735 MRAPQ8TCY5 172 aa16.78■□□□□ 0.28
EPCAM-201ENST00000263735 H0Y8G0 127 aa16.77■□□□□ 0.28
EPCAM-201ENST00000263735 RPL39P62891 51 aaKnown RBP16.76■□□□□ 0.27
EPCAM-201ENST00000263735 TENM3Q9P273 2699 aa16.76■□□□□ 0.27
EPCAM-201ENST00000263735 A0A0J9YWU9 116 aa16.76■□□□□ 0.27
EPCAM-201ENST00000263735 C12orf74Q32Q52 190 aa16.76■□□□□ 0.27
EPCAM-201ENST00000263735 LINC01545Q5VT33 79 aa16.76■□□□□ 0.27
EPCAM-201ENST00000263735 CHCHD7Q9BUK0 85 aa16.75■□□□□ 0.27
EPCAM-201ENST00000263735 PAX4O43316 350 aa16.74■□□□□ 0.27
EPCAM-201ENST00000263735 LGALS9CQ6DKI2 356 aa16.74■□□□□ 0.27
EPCAM-201ENST00000263735 Q6ZN92 141 aa16.74■□□□□ 0.27
EPCAM-201ENST00000263735 TEX43Q6ZNM6 134 aa16.74■□□□□ 0.27
EPCAM-201ENST00000263735 TIMM17AQ99595 171 aa16.74■□□□□ 0.27
EPCAM-201ENST00000263735 GTSF1LQ9H1H1 148 aa16.74■□□□□ 0.27
EPCAM-201ENST00000263735 ZMAT4Q9H898 229 aa16.74■□□□□ 0.27
EPCAM-201ENST00000263735 PRSS1P07477 247 aa16.73■□□□□ 0.27
EPCAM-201ENST00000263735 GYPEP15421 78 aa16.73■□□□□ 0.27
EPCAM-201ENST00000263735 S100A12P80511 92 aa16.73■□□□□ 0.27
EPCAM-201ENST00000263735 IGIPA6NJ69 53 aa16.73■□□□□ 0.27
EPCAM-201ENST00000263735 TMEM141Q96I45 108 aa16.73■□□□□ 0.27
EPCAM-201ENST00000263735 F5H768 121 aa16.72■□□□□ 0.27
EPCAM-201ENST00000263735 NTM-AS1Q6ZSK4 140 aa16.7■□□□□ 0.26
EPCAM-201ENST00000263735 VSIG2Q96IQ7 327 aa16.7■□□□□ 0.26
EPCAM-201ENST00000263735 HTN3P15516 51 aa16.7■□□□□ 0.26
EPCAM-201ENST00000263735 TMEM97Q5BJF2 176 aa16.7■□□□□ 0.26
EPCAM-201ENST00000263735 PYGO1Q9Y3Y4 419 aa16.7■□□□□ 0.26
EPCAM-201ENST00000263735 BAALCQ8WXS3 180 aa16.69■□□□□ 0.26
EPCAM-201ENST00000263735 TRAV26-1A0A087WT03 109 aa16.68■□□□□ 0.26
EPCAM-201ENST00000263735 TRAV12-1A0A0B4J245 112 aa16.68■□□□□ 0.26
EPCAM-201ENST00000263735 ODF1Q14990 250 aa16.68■□□□□ 0.26
EPCAM-201ENST00000263735 ATP6V0E2Q8NHE4 81 aa16.68■□□□□ 0.26
EPCAM-201ENST00000263735 B9D2Q9BPU9 175 aa16.68■□□□□ 0.26
EPCAM-201ENST00000263735 A0A0J9YY99 117 aa16.67■□□□□ 0.26
EPCAM-201ENST00000263735 NPSP0C0P6 89 aa16.67■□□□□ 0.26
EPCAM-201ENST00000263735 C11orf45Q8TAV5 145 aa16.67■□□□□ 0.26
EPCAM-201ENST00000263735 Q6ZTC4 211 aa16.67■□□□□ 0.26
EPCAM-201ENST00000263735 ATOH7Q8N100 152 aa16.67■□□□□ 0.26
EPCAM-201ENST00000263735 VAMP8Q9BV40 100 aa16.67■□□□□ 0.26
EPCAM-201ENST00000263735 TRBV25-1A0A075B6N4 114 aa16.66■□□□□ 0.26
EPCAM-201ENST00000263735 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.66■□□□□ 0.26
EPCAM-201ENST00000263735 IGKV2-29A2NJV5 120 aaPredicted RBP16.66■□□□□ 0.26
EPCAM-201ENST00000263735 PMCHL2Q9BQD1 86 aa16.66■□□□□ 0.26
EPCAM-201ENST00000263735 SPANXA1Q9NS26 97 aa16.66■□□□□ 0.26
EPCAM-201ENST00000263735 A0A087WX48 190 aa16.65■□□□□ 0.26
EPCAM-201ENST00000263735 UBE2D4Q9Y2X8 147 aa16.65■□□□□ 0.26
EPCAM-201ENST00000263735 TRBV6-8A0A0A6YYG3 113 aa16.64■□□□□ 0.25
EPCAM-201ENST00000263735 PAPPA-AS1Q5QFB9 102 aa16.64■□□□□ 0.25
EPCAM-201ENST00000263735 TMEM243Q9BU79 118 aa16.64■□□□□ 0.25
EPCAM-201ENST00000263735 TIMM21Q9BVV7 248 aa16.64■□□□□ 0.25
EPCAM-201ENST00000263735 IGLV4-3A0A075B6K6 122 aa16.63■□□□□ 0.25
EPCAM-201ENST00000263735 SMAGPQ0VAQ4 97 aa16.63■□□□□ 0.25
EPCAM-201ENST00000263735 PMVKQ15126 192 aa16.63■□□□□ 0.25
EPCAM-201ENST00000263735 H3BNG1 76 aa16.62■□□□□ 0.25
EPCAM-201ENST00000263735 H7C423 109 aa16.62■□□□□ 0.25
EPCAM-201ENST00000263735 NANOS2P60321 138 aaKnown RBP16.62■□□□□ 0.25
EPCAM-201ENST00000263735 MRPL23Q16540 153 aaKnown RBP16.62■□□□□ 0.25
EPCAM-201ENST00000263735 ICOSQ9Y6W8 199 aa16.62■□□□□ 0.25
EPCAM-201ENST00000263735 TRAV9-2A0A087WT02 112 aa16.62■□□□□ 0.25
EPCAM-201ENST00000263735 F8VRH5 84 aa16.62■□□□□ 0.25
EPCAM-201ENST00000263735 SH2D6Q7Z4S9 175 aa16.62■□□□□ 0.25
EPCAM-201ENST00000263735 MRPL52Q86TS9 123 aaKnown RBP16.61■□□□□ 0.25
EPCAM-201ENST00000263735 ZNF664Q8N3J9 261 aa16.61■□□□□ 0.25
EPCAM-201ENST00000263735 MRPL35Q9NZE8 188 aaKnown RBP16.61■□□□□ 0.25
EPCAM-201ENST00000263735 PAM16Q9Y3D7 125 aa16.61■□□□□ 0.25
EPCAM-201ENST00000263735 CHTOPQ9Y3Y2 248 aaKnown RBP16.61■□□□□ 0.25
EPCAM-201ENST00000263735 DNHD1Q96M86 4753 aa16.61■□□□□ 0.25
EPCAM-201ENST00000263735 PRSS29PA6NIE9 313 aa16.6■□□□□ 0.25
EPCAM-201ENST00000263735 UBE2L6O14933 153 aa16.6■□□□□ 0.25
EPCAM-201ENST00000263735 CSDC2Q9Y534 153 aaKnown RBP16.6■□□□□ 0.25
EPCAM-201ENST00000263735 HUWE1Q7Z6Z7 4374 aaKnown RBP16.6■□□□□ 0.25
EPCAM-201ENST00000263735 DPM2O94777 84 aa16.59■□□□□ 0.25
EPCAM-201ENST00000263735 OPRPNQ99935 248 aaPredicted RBP16.59■□□□□ 0.25
EPCAM-201ENST00000263735 IGKCP01834 107 aa16.59■□□□□ 0.25
EPCAM-201ENST00000263735 PLNP26678 52 aa16.59■□□□□ 0.25
EPCAM-201ENST00000263735 CEMP1Q6PRD7 247 aaPredicted RBP16.59■□□□□ 0.25
EPCAM-201ENST00000263735 CST9LQ9H4G1 147 aa16.59■□□□□ 0.25
EPCAM-201ENST00000263735 A0A096LPF7 62 aa16.58■□□□□ 0.24
EPCAM-201ENST00000263735 FGF6P10767 208 aa16.58■□□□□ 0.24
EPCAM-201ENST00000263735 MRPS36P82909 103 aaKnown RBP16.58■□□□□ 0.24
EPCAM-201ENST00000263735 SPATA45Q537H7 98 aa16.58■□□□□ 0.24
EPCAM-201ENST00000263735 FAM104AQ969W3 186 aa16.58■□□□□ 0.24
EPCAM-201ENST00000263735 VCX2Q9H322 139 aa16.58■□□□□ 0.24
EPCAM-201ENST00000263735 DEFB131BA0A096LNP1 70 aa16.57■□□□□ 0.24
EPCAM-201ENST00000263735 HSBP1L1C9JCN9 74 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms