RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 PHLDA1Q8WV24 401 aaPredicted RBP7.04□□□□□ -1.28
TTC39A-201ENST00000262675 RAB37Q96AX2 223 aa7.04□□□□□ -1.28
TTC39A-201ENST00000262675 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
TTC39A-201ENST00000262675 TRGV11A0A075B6L2 103 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 IGHV1OR15-1A0A075B7D0 117 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 A0A1B0GWB2 263 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 A6NJY4 79 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 SUMO4Q6EEV6 95 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 ZFP2Q6ZN57 461 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 PEMTQ9UBM1 199 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 TRBV7-3A0A075B6L6 115 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 TRAV12-3A0A0B4J271 114 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 IGIPA6NJ69 53 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 DEFB1P60022 68 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 RNF151Q2KHN1 245 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 PIK3CD-AS1Q5SR53 167 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 TRPT1Q86TN4 253 aaKnown RBP7.03□□□□□ -1.28
TTC39A-201ENST00000262675 MAPKAPK5-AS1Q8N8E1 139 aa7.03□□□□□ -1.28
TTC39A-201ENST00000262675 NHP2Q9NX24 153 aaKnown RBP7.03□□□□□ -1.28
TTC39A-201ENST00000262675 MUC4Q99102 2169 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 DNAH7Q8WXX0 4024 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 NEGR1Q7Z3B1 354 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 TTTY13Q9BZ97 58 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 TENM2Q9NT68 2774 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 SDHAF1A6NFY7 115 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 F5H697 171 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 ZNF688P0C7X2 276 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 C12orf74Q32Q52 190 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 VPS25Q9BRG1 176 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 TP53TG1Q9Y2A0 90 aa7.02□□□□□ -1.29
TTC39A-201ENST00000262675 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
TTC39A-201ENST00000262675 IGLL5B9A064 214 aa7.01□□□□□ -1.29
TTC39A-201ENST00000262675 PRADC1Q9BSG0 188 aa7.01□□□□□ -1.29
TTC39A-201ENST00000262675 A8MTW9 85 aa7.01□□□□□ -1.29
TTC39A-201ENST00000262675 F8W1H4 67 aa7.01□□□□□ -1.29
TTC39A-201ENST00000262675 PTH2Q96A98 100 aa7.01□□□□□ -1.29
TTC39A-201ENST00000262675 ZNF479Q96JC4 524 aa7.01□□□□□ -1.29
TTC39A-201ENST00000262675 HUWE1Q7Z6Z7 4374 aaKnown RBP7□□□□□ -1.29
TTC39A-201ENST00000262675 M0QY20 66 aa7□□□□□ -1.29
TTC39A-201ENST00000262675 CRYGDP07320 174 aa7□□□□□ -1.29
TTC39A-201ENST00000262675 CRYBA4P53673 196 aa7□□□□□ -1.29
TTC39A-201ENST00000262675 ZNF815PA8K554 130 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 SYNJ2BPP57105 145 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 ZNF876PQ49A33 203 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
TTC39A-201ENST00000262675 IGLV4-69A0A075B6H9 119 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 A0A087WWL8 130 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 I3L3M4 83 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 SPRY2O43597 315 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 TSHBP01222 138 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 ZNF56Q15929 161 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 RRN3P1Q2M238 152 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 LYRM7Q5U5X0 104 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 AMTNQ6UX39 209 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 SCGB1D4Q6XE38 83 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 NFE4Q86UQ8 179 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 RYR2Q92736 4967 aa6.99□□□□□ -1.29
TTC39A-201ENST00000262675 J3QR89 54 aa6.98□□□□□ -1.29
TTC39A-201ENST00000262675 MDFICQ9P1T7 246 aa6.98□□□□□ -1.29
TTC39A-201ENST00000262675 EDN2P20800 178 aa6.98□□□□□ -1.29
TTC39A-201ENST00000262675 SPAG8Q99932 426 aaPredicted RBP6.98□□□□□ -1.29
TTC39A-201ENST00000262675 NAA38Q9BRA0 125 aaKnown RBP6.98□□□□□ -1.29
TTC39A-201ENST00000262675 LINC00467Q9BRT7 94 aa6.98□□□□□ -1.29
TTC39A-201ENST00000262675 JPT2Q9H910 190 aa6.98□□□□□ -1.29
TTC39A-201ENST00000262675 A8MWV9 139 aa6.97□□□□□ -1.29
TTC39A-201ENST00000262675 K7ERJ3 54 aa6.97□□□□□ -1.29
TTC39A-201ENST00000262675 SRSF9Q13242 221 aaKnown RBP eCLIP6.97□□□□□ -1.29
TTC39A-201ENST00000262675 SPINK13Q1W4C9 94 aa6.97□□□□□ -1.29
TTC39A-201ENST00000262675 FAM74A4Q5TZK3 123 aa6.97□□□□□ -1.29
TTC39A-201ENST00000262675 C20orf203Q8NBC4 194 aa6.97□□□□□ -1.29
TTC39A-201ENST00000262675 PYGO1Q9Y3Y4 419 aa6.97□□□□□ -1.29
TTC39A-201ENST00000262675 AGRNO00468 2067 aa6.97□□□□□ -1.29
TTC39A-201ENST00000262675 DNAH1Q9P2D7 4330 aa6.96□□□□□ -1.29
TTC39A-201ENST00000262675 DYNLRB2Q8TF09 96 aa6.96□□□□□ -1.29
TTC39A-201ENST00000262675 TRAV12-2A0A075B6T6 113 aa6.96□□□□□ -1.3
TTC39A-201ENST00000262675 UBE2D1P51668 147 aa6.96□□□□□ -1.3
TTC39A-201ENST00000262675 CD300EQ496F6 205 aaPredicted RBP6.96□□□□□ -1.3
TTC39A-201ENST00000262675 CLUHP3Q96NS8 147 aa6.96□□□□□ -1.3
TTC39A-201ENST00000262675 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 MORN3Q6PF18 240 aaPredicted RBP6.95□□□□□ -1.3
TTC39A-201ENST00000262675 SLC25A29Q8N8R3 303 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 A0A0J9YY99 117 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 M0R2P5 195 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 RHODO00212 210 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 LEPROTO15243 131 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 IGKV3-20P01619 116 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 LGALS3P17931 250 aaKnown RBP6.95□□□□□ -1.3
TTC39A-201ENST00000262675 RPL39P62891 51 aaKnown RBP6.95□□□□□ -1.3
TTC39A-201ENST00000262675 ZNF415Q09FC8 603 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 TMEM170BQ5T4T1 132 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 PLEKHB2Q96CS7 222 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 LYSTQ99698 3801 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 SPXQ9BT56 116 aa6.95□□□□□ -1.3
TTC39A-201ENST00000262675 BIRC6Q9NR09 4857 aa6.94□□□□□ -1.3
TTC39A-201ENST00000262675 H3BMM0 161 aa6.94□□□□□ -1.3
TTC39A-201ENST00000262675 J3QQQ9 107 aa6.94□□□□□ -1.3
TTC39A-201ENST00000262675 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
TTC39A-201ENST00000262675 TMEM223A0PJW6 202 aa6.93□□□□□ -1.3
TTC39A-201ENST00000262675 NUPR2A6NF83 97 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms