RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 GAGE6Q13070 117 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 I3L3M4 83 aa10.49□□□□□ -0.73
TUBGCP3-201ENST00000261965 COX8CQ7Z4L0 72 aa10.48□□□□□ -0.73
TUBGCP3-201ENST00000261965 NDUFA4O00483 81 aa10.48□□□□□ -0.73
TUBGCP3-201ENST00000261965 MRPL23Q16540 153 aaKnown RBP10.48□□□□□ -0.73
TUBGCP3-201ENST00000261965 GPHB5Q86YW7 130 aa10.48□□□□□ -0.73
TUBGCP3-201ENST00000261965 ZMAT4Q9H898 229 aa10.48□□□□□ -0.73
TUBGCP3-201ENST00000261965 PRB1P04280 392 aa10.47□□□□□ -0.73
TUBGCP3-201ENST00000261965 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
TUBGCP3-201ENST00000261965 TRAV12-1A0A0B4J245 112 aa10.47□□□□□ -0.73
TUBGCP3-201ENST00000261965 FAM223BA6NKX1 122 aa10.47□□□□□ -0.73
TUBGCP3-201ENST00000261965 TCTEX1D4Q5JR98 221 aa10.47□□□□□ -0.73
TUBGCP3-201ENST00000261965 FAM223AQ8IWN6 122 aa10.47□□□□□ -0.73
TUBGCP3-201ENST00000261965 Q9H8V8 135 aa10.47□□□□□ -0.73
TUBGCP3-201ENST00000261965 IGHV4-30-2A0A087WSY4 118 aa10.46□□□□□ -0.73
TUBGCP3-201ENST00000261965 IGHV3-30-3P0DP02 117 aa10.46□□□□□ -0.73
TUBGCP3-201ENST00000261965 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.73
TUBGCP3-201ENST00000261965 TMEM141Q96I45 108 aa10.46□□□□□ -0.73
TUBGCP3-201ENST00000261965 CHCHD5Q9BSY4 110 aa10.46□□□□□ -0.73
TUBGCP3-201ENST00000261965 F8P00451 2351 aa10.46□□□□□ -0.73
TUBGCP3-201ENST00000261965 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.74
TUBGCP3-201ENST00000261965 PAX4O43316 350 aa10.46□□□□□ -0.74
TUBGCP3-201ENST00000261965 UCNP55089 124 aa10.46□□□□□ -0.74
TUBGCP3-201ENST00000261965 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.74
TUBGCP3-201ENST00000261965 A0A096LPF7 62 aa10.45□□□□□ -0.74
TUBGCP3-201ENST00000261965 RPL35AP18077 110 aaKnown RBP10.45□□□□□ -0.74
TUBGCP3-201ENST00000261965 CSMD2Q7Z408 3487 aa10.45□□□□□ -0.74
TUBGCP3-201ENST00000261965 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
TUBGCP3-201ENST00000261965 PIFOQ8TCI5 191 aa10.45□□□□□ -0.74
TUBGCP3-201ENST00000261965 CFAP46Q8IYW2 2715 aa10.45□□□□□ -0.74
TUBGCP3-201ENST00000261965 NXPH4O95158 308 aa10.44□□□□□ -0.74
TUBGCP3-201ENST00000261965 TMEM190Q8WZ59 177 aa10.44□□□□□ -0.74
TUBGCP3-201ENST00000261965 Q9HAA7 133 aa10.44□□□□□ -0.74
TUBGCP3-201ENST00000261965 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
TUBGCP3-201ENST00000261965 RHODO00212 210 aa10.44□□□□□ -0.74
TUBGCP3-201ENST00000261965 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
TUBGCP3-201ENST00000261965 USMG5Q96IX5 58 aa10.44□□□□□ -0.74
TUBGCP3-201ENST00000261965 TRIAP1O43715 76 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 FAM236AA0A1B0GUQ0 79 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 FAM236BA0A1B0GV22 79 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 CRLF1O75462 422 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 SLURP1P55000 103 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 C9orf153Q5TBE3 101 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 TRGV11A0A075B6L2 103 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 SLC25A29Q8N8R3 303 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 SPATA25Q9BR10 227 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 U3KQE9 123 aa10.43□□□□□ -0.74
TUBGCP3-201ENST00000261965 AVPP01185 164 aa10.42□□□□□ -0.74
TUBGCP3-201ENST00000261965 PSMG3-AS1Q96PY0 264 aa10.42□□□□□ -0.74
TUBGCP3-201ENST00000261965 ICOSQ9Y6W8 199 aa10.42□□□□□ -0.74
TUBGCP3-201ENST00000261965 HERV-K104P63124 156 aa10.42□□□□□ -0.74
TUBGCP3-201ENST00000261965 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
TUBGCP3-201ENST00000261965 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
TUBGCP3-201ENST00000261965 FASNP49327 2511 aaKnown RBP10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 A0A0J9YXY3 114 aa10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 STHQ8IWL8 128 aa10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 MRPL53Q96EL3 112 aaKnown RBP10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 IGHV3-33P01772 117 aa10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 HTN3P15516 51 aa10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 ZNF22P17026 224 aaPredicted RBP10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 DEFB112Q30KQ8 113 aa10.41□□□□□ -0.74
TUBGCP3-201ENST00000261965 LEPROTO15243 131 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 NDUFA7O95182 113 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 DEFB130BP0DP73 79 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 DEFB130AP0DP74 79 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 IGKV3D-7A0A0C4DH55 119 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 C20orf203Q8NBC4 194 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 CDIP1Q9H305 208 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 CDKN2A-AS1Q9UH64 79 aa10.4□□□□□ -0.74
TUBGCP3-201ENST00000261965 ELANEP08246 267 aa10.39□□□□□ -0.75
TUBGCP3-201ENST00000261965 NDUFV3P56181 108 aaKnown RBP10.39□□□□□ -0.75
TUBGCP3-201ENST00000261965 Q9UF83 564 aa10.39□□□□□ -0.75
TUBGCP3-201ENST00000261965 RNF223E7ERA6 249 aa10.39□□□□□ -0.75
TUBGCP3-201ENST00000261965 TRGV4A0A0C4DH28 118 aa10.39□□□□□ -0.75
TUBGCP3-201ENST00000261965 MSMBP08118 114 aa10.39□□□□□ -0.75
TUBGCP3-201ENST00000261965 CRYGDP07320 174 aa10.38□□□□□ -0.75
TUBGCP3-201ENST00000261965 TMEM101Q96IK0 257 aa10.38□□□□□ -0.75
TUBGCP3-201ENST00000261965 USP24Q9UPU5 2620 aa10.38□□□□□ -0.75
TUBGCP3-201ENST00000261965 YAE1D1Q9NRH1 226 aa10.38□□□□□ -0.75
TUBGCP3-201ENST00000261965 IGHG2P01859 326 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 CRPP02741 224 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 IGLV4-69A0A075B6H9 119 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 IGHV4OR15-8A0A075B7B6 117 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 A0A087WW49 117 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 TSHBP01222 138 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 ATP5G1P05496 136 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 LENEPQ9Y5L5 61 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 IGLV4-3A0A075B6K6 122 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 PIK3CD-AS1Q5SR53 167 aa10.37□□□□□ -0.75
TUBGCP3-201ENST00000261965 IGHV4-4A0A075B6R2 117 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 LGALS9O00182 355 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 SOCS3O14543 225 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 BAALC-AS2P0C853 105 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 ZNF415Q09FC8 603 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 TIMM17AQ99595 171 aa10.36□□□□□ -0.75
TUBGCP3-201ENST00000261965 UBE2D1P51668 147 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms