RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 DEFB130BP0DP73 79 aa7.58□□□□□ -1.2
PALB2-201ENST00000261584 DEFB130AP0DP74 79 aa7.58□□□□□ -1.2
PALB2-201ENST00000261584 IFITM1P13164 125 aa7.58□□□□□ -1.2
PALB2-201ENST00000261584 HIST1H4AP62805 103 aaKnown RBP7.58□□□□□ -1.2
PALB2-201ENST00000261584 DEFB112Q30KQ8 113 aa7.58□□□□□ -1.2
PALB2-201ENST00000261584 Q9HAA7 133 aa7.58□□□□□ -1.2
PALB2-201ENST00000261584 ZANQ9Y493 2812 aa7.58□□□□□ -1.2
PALB2-201ENST00000261584 IGHV3-30-3P0DP02 117 aa7.58□□□□□ -1.2
PALB2-201ENST00000261584 NDUFA7O95182 113 aa7.57□□□□□ -1.2
PALB2-201ENST00000261584 CFAP126Q5VTH2 177 aa7.57□□□□□ -1.2
PALB2-201ENST00000261584 TMEM141Q96I45 108 aa7.57□□□□□ -1.2
PALB2-201ENST00000261584 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
PALB2-201ENST00000261584 STHQ8IWL8 128 aa7.57□□□□□ -1.2
PALB2-201ENST00000261584 ESM1Q9NQ30 184 aa7.57□□□□□ -1.2
PALB2-201ENST00000261584 Q9UF83 564 aa7.57□□□□□ -1.2
PALB2-201ENST00000261584 GAGE7O76087 117 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 GAGE12FP0CL80 117 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 GAGE12GP0CL81 117 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 GAGE12IP0CL82 117 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 TMEM190Q8WZ59 177 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 TRAV12-1A0A0B4J245 112 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 LMO4P61968 165 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 GAGE6Q13070 117 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 USMG5Q96IX5 58 aa7.56□□□□□ -1.2
PALB2-201ENST00000261584 RHODO00212 210 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 MSMBP08118 114 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 IGLV2-18A0A075B6J9 118 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 TRGV11A0A075B6L2 103 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 CCDC179H3BU77 68 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 TRIAP1O43715 76 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 CRLF1O75462 422 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
PALB2-201ENST00000261584 ZNF48Q96MX3 618 aaPredicted RBP7.55□□□□□ -1.2
PALB2-201ENST00000261584 IGHV4OR15-8A0A075B7B6 117 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 A0A087WW49 117 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 TRGV4A0A0C4DH28 118 aa7.55□□□□□ -1.2
PALB2-201ENST00000261584 IGKV3D-7A0A0C4DH55 119 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 ICOSQ9Y6W8 199 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 FAM236AA0A1B0GUQ0 79 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 FAM236BA0A1B0GV22 79 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 ZNF22P17026 224 aaPredicted RBP7.54□□□□□ -1.2
PALB2-201ENST00000261584 C18orf65Q6ZTR6 163 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 C5orf38Q86SI9 138 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 U3KQE9 123 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 ELANEP08246 267 aa7.54□□□□□ -1.2
PALB2-201ENST00000261584 MRPL53Q96EL3 112 aaKnown RBP7.54□□□□□ -1.2
PALB2-201ENST00000261584 IGHV3-30P01768 117 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 IGHV3-30-5P0DP03 117 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 ATP5G1P05496 136 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 C9orf153Q5TBE3 101 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 C20orf203Q8NBC4 194 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 LEPROTO15243 131 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 NSUN5P1Q3KNT7 163 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 PIK3CD-AS1Q5SR53 167 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 ZMAT4Q9H898 229 aa7.53□□□□□ -1.2
PALB2-201ENST00000261584 IGHV3-33P01772 117 aa7.52□□□□□ -1.21
PALB2-201ENST00000261584 GCN1Q92616 2671 aaKnown RBP7.52□□□□□ -1.21
PALB2-201ENST00000261584 TSHBP01222 138 aa7.52□□□□□ -1.21
PALB2-201ENST00000261584 CRYGDP07320 174 aa7.52□□□□□ -1.21
PALB2-201ENST00000261584 UCNP55089 124 aa7.52□□□□□ -1.21
PALB2-201ENST00000261584 HERV-K104P63124 156 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 NOP10Q9NPE3 64 aaKnown RBP7.51□□□□□ -1.21
PALB2-201ENST00000261584 IGLV4-3A0A075B6K6 122 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 B4DSR2 109 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 ZNF415Q09FC8 603 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 HECTD1Q9ULT8 2610 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 IGLV4-69A0A075B6H9 119 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 CRPP02741 224 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 GPHB5Q86YW7 130 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 Q8N6K4 173 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 SPATA25Q9BR10 227 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 LINC00467Q9BRT7 94 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
PALB2-201ENST00000261584 AVPP01185 164 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 RPL36AP83881 106 aaKnown RBP7.5□□□□□ -1.21
PALB2-201ENST00000261584 TMEM61Q8N0U2 210 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 RPL36ALQ969Q0 106 aaKnown RBP7.5□□□□□ -1.21
PALB2-201ENST00000261584 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 M0QY20 66 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 BAALC-AS2P0C853 105 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 WFDC11Q8NEX6 87 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 FLNBO75369 2602 aaKnown RBP7.5□□□□□ -1.21
PALB2-201ENST00000261584 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 NDUFV3P56181 108 aaKnown RBP7.5□□□□□ -1.21
PALB2-201ENST00000261584 C6orf226Q5I0X4 101 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 ADAMTSL4-AS1Q5T5F5 129 aa7.5□□□□□ -1.21
PALB2-201ENST00000261584 LGALS9O00182 355 aa7.49□□□□□ -1.21
PALB2-201ENST00000261584 YAE1D1Q9NRH1 226 aa7.49□□□□□ -1.21
PALB2-201ENST00000261584 SLPIP03973 132 aa7.49□□□□□ -1.21
PALB2-201ENST00000261584 FHL3Q13643 280 aa7.49□□□□□ -1.21
PALB2-201ENST00000261584 UTP20O75691 2785 aaKnown RBP7.49□□□□□ -1.21
PALB2-201ENST00000261584 A0A0J9YX75 114 aa7.49□□□□□ -1.21
PALB2-201ENST00000261584 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
PALB2-201ENST00000261584 IGIPA6NJ69 53 aa7.49□□□□□ -1.21
PALB2-201ENST00000261584 XCL1P47992 114 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms