RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 C20orf203Q8NBC4 194 aa12.74□□□□□ -0.37
SSB-201ENST00000260956 CST9LQ9H4G1 147 aa12.74□□□□□ -0.37
SSB-201ENST00000260956 E9PLD3 99 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 I3L3M4 83 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 RS1O15537 224 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 HTN1P15515 57 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 PMVKQ15126 192 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 SAMD5Q5TGI4 173 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 FAM104AQ969W3 186 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 LINC01587Q99440 93 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 CHAC1Q9BUX1 264 aa12.73□□□□□ -0.37
SSB-201ENST00000260956 C11orf86A6NJI1 115 aa12.72□□□□□ -0.37
SSB-201ENST00000260956 AZU1P20160 251 aa12.72□□□□□ -0.37
SSB-201ENST00000260956 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
SSB-201ENST00000260956 Q9UF83 564 aa12.72□□□□□ -0.37
SSB-201ENST00000260956 STHQ8IWL8 128 aa12.71□□□□□ -0.37
SSB-201ENST00000260956 PRKDCP78527 4128 aaKnown RBP12.71□□□□□ -0.38
SSB-201ENST00000260956 RHODO00212 210 aa12.71□□□□□ -0.38
SSB-201ENST00000260956 CCL25O15444 150 aa12.71□□□□□ -0.38
SSB-201ENST00000260956 IGHV3-53P01767 116 aa12.71□□□□□ -0.38
SSB-201ENST00000260956 RNASE8Q8TDE3 154 aaKnown RBP12.71□□□□□ -0.38
SSB-201ENST00000260956 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.38
SSB-201ENST00000260956 IGHV3-73A0A0B4J1V6 119 aa12.69□□□□□ -0.38
SSB-201ENST00000260956 UBE2V1Q13404 147 aa12.69□□□□□ -0.38
SSB-201ENST00000260956 SAP30O75446 220 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 PRB2P02812 416 aaPredicted RBP12.68□□□□□ -0.38
SSB-201ENST00000260956 FXYD2P54710 66 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 NFE4Q86UQ8 179 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 PRADC1Q9BSG0 188 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 TM2D2Q9BX73 214 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 TRAV8-6A0A0B4J262 113 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 H3BRM9 83 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 CMC4P56277 68 aaPredicted RBP12.68□□□□□ -0.38
SSB-201ENST00000260956 ZNRF2Q8NHG8 242 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 WFDC10AQ9H1F0 79 aa12.68□□□□□ -0.38
SSB-201ENST00000260956 IGLV4-3A0A075B6K6 122 aa12.67□□□□□ -0.38
SSB-201ENST00000260956 TRBV7-3A0A075B6L6 115 aa12.67□□□□□ -0.38
SSB-201ENST00000260956 K7EP13 123 aa12.67□□□□□ -0.38
SSB-201ENST00000260956 KRTAP10-11P60412 298 aa12.67□□□□□ -0.38
SSB-201ENST00000260956 PAPPA-AS1Q5QFB9 102 aa12.67□□□□□ -0.38
SSB-201ENST00000260956 KPRPQ5T749 579 aaPredicted RBP12.67□□□□□ -0.38
SSB-201ENST00000260956 OR11H2Q8NH07 326 aa12.67□□□□□ -0.38
SSB-201ENST00000260956 OPRPNQ99935 248 aaPredicted RBP12.67□□□□□ -0.38
SSB-201ENST00000260956 PYGO1Q9Y3Y4 419 aa12.67□□□□□ -0.38
SSB-201ENST00000260956 PLAC8L1A1L4L8 177 aa12.66□□□□□ -0.38
SSB-201ENST00000260956 TAL2Q16559 108 aa12.66□□□□□ -0.38
SSB-201ENST00000260956 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
SSB-201ENST00000260956 MYMXA0A1B0GTQ4 84 aa12.65□□□□□ -0.38
SSB-201ENST00000260956 A6NDN8 102 aa12.65□□□□□ -0.38
SSB-201ENST00000260956 PHLDA1Q8WV24 401 aaPredicted RBP12.65□□□□□ -0.38
SSB-201ENST00000260956 CSNK1G2-AS1Q8NCQ2 148 aa12.65□□□□□ -0.38
SSB-201ENST00000260956 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
SSB-201ENST00000260956 DNAJC30Q96LL9 226 aa12.65□□□□□ -0.38
SSB-201ENST00000260956 C9orf118A6NHY6 69 aa12.64□□□□□ -0.39
SSB-201ENST00000260956 WIPF1O43516 503 aa12.64□□□□□ -0.39
SSB-201ENST00000260956 EMP1P54849 157 aa12.64□□□□□ -0.39
SSB-201ENST00000260956 CEND1Q8N111 149 aa12.64□□□□□ -0.39
SSB-201ENST00000260956 AMELXQ99217 191 aa12.64□□□□□ -0.39
SSB-201ENST00000260956 TSPEAR-AS2P59090 65 aa12.63□□□□□ -0.39
SSB-201ENST00000260956 EGFEM1PQ0D2K5 195 aa12.62□□□□□ -0.39
SSB-201ENST00000260956 TGP01266 2768 aa12.62□□□□□ -0.39
SSB-201ENST00000260956 CRYBA4P53673 196 aa12.62□□□□□ -0.39
SSB-201ENST00000260956 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
SSB-201ENST00000260956 GCSHP23434 173 aa12.61□□□□□ -0.39
SSB-201ENST00000260956 PTTG1IPP53801 180 aa12.61□□□□□ -0.39
SSB-201ENST00000260956 DAZ2Q13117 558 aaKnown RBP12.61□□□□□ -0.39
SSB-201ENST00000260956 C9orf66Q5T8R8 295 aa12.6□□□□□ -0.39
SSB-201ENST00000260956 AMMECR1LQ6DCA0 310 aa12.6□□□□□ -0.39
SSB-201ENST00000260956 Q6ZTI0 123 aa12.6□□□□□ -0.39
SSB-201ENST00000260956 PLEKHB2Q96CS7 222 aa12.6□□□□□ -0.39
SSB-201ENST00000260956 A0A1B0GWB2 263 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 ZNF22P17026 224 aaPredicted RBP12.59□□□□□ -0.39
SSB-201ENST00000260956 VAMP3Q15836 100 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 OR5A1Q8NGJ0 315 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 IGHV3OR16-12A0A075B7B8 117 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 TMEM223A0PJW6 202 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 SPANXA1Q9NS26 97 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 UBE2D4Q9Y2X8 147 aa12.59□□□□□ -0.39
SSB-201ENST00000260956 TRGV1A0A0A0MS02 117 aa12.58□□□□□ -0.4
SSB-201ENST00000260956 TRAV4A0A0B4J268 109 aa12.58□□□□□ -0.4
SSB-201ENST00000260956 ZNF815PA8K554 130 aa12.58□□□□□ -0.4
SSB-201ENST00000260956 HERVK_113P61574 105 aa12.58□□□□□ -0.4
SSB-201ENST00000260956 A0A0J9YXV3 536 aa12.57□□□□□ -0.4
SSB-201ENST00000260956 K7ERJ3 54 aa12.57□□□□□ -0.4
SSB-201ENST00000260956 MRPS36P82909 103 aaKnown RBP12.57□□□□□ -0.4
SSB-201ENST00000260956 CEMP1Q6PRD7 247 aaPredicted RBP12.57□□□□□ -0.4
SSB-201ENST00000260956 C16orf74Q96GX8 76 aa12.57□□□□□ -0.4
SSB-201ENST00000260956 OVOL2Q9BRP0 275 aa12.57□□□□□ -0.4
SSB-201ENST00000260956 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
SSB-201ENST00000260956 INSL3P51460 131 aa12.56□□□□□ -0.4
SSB-201ENST00000260956 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
SSB-201ENST00000260956 A0A0J9YY99 117 aa12.55□□□□□ -0.4
SSB-201ENST00000260956 TRBV10-1A0A0K0K1A3 114 aa12.55□□□□□ -0.4
SSB-201ENST00000260956 H3BUT2 72 aa12.55□□□□□ -0.4
SSB-201ENST00000260956 SMIM13P0DJ93 91 aa12.55□□□□□ -0.4
SSB-201ENST00000260956 TMEM170BQ5T4T1 132 aa12.55□□□□□ -0.4
SSB-201ENST00000260956 TIMM21Q9BVV7 248 aa12.55□□□□□ -0.4
SSB-201ENST00000260956 VCX2Q9H322 139 aa12.55□□□□□ -0.4
SSB-201ENST00000260956 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms