RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CIDEAO60543 219 aa19.79■□□□□ 0.76
CCM2-201ENST00000258781 PMVKQ15126 192 aa19.79■□□□□ 0.76
CCM2-201ENST00000258781 BOD1L2Q8IYS8 172 aa19.79■□□□□ 0.76
CCM2-201ENST00000258781 TRBV10-1A0A0K0K1A3 114 aa19.77■□□□□ 0.76
CCM2-201ENST00000258781 NMUP48645 174 aa19.76■□□□□ 0.75
CCM2-201ENST00000258781 KIR2DL5BQ8NHK3 375 aa19.76■□□□□ 0.75
CCM2-201ENST00000258781 K7EQD1 137 aa19.75■□□□□ 0.75
CCM2-201ENST00000258781 CST9LQ9H4G1 147 aa19.75■□□□□ 0.75
CCM2-201ENST00000258781 KRTAP10-11P60412 298 aa19.75■□□□□ 0.75
CCM2-201ENST00000258781 BATFQ16520 125 aa19.75■□□□□ 0.75
CCM2-201ENST00000258781 GAGE12BA1L429 117 aa19.74■□□□□ 0.75
CCM2-201ENST00000258781 SMIM9A6NGZ8 99 aa19.74■□□□□ 0.75
CCM2-201ENST00000258781 GAGE7O76087 117 aa19.74■□□□□ 0.75
CCM2-201ENST00000258781 GAGE12FP0CL80 117 aa19.74■□□□□ 0.75
CCM2-201ENST00000258781 GAGE12GP0CL81 117 aa19.74■□□□□ 0.75
CCM2-201ENST00000258781 GAGE12IP0CL82 117 aa19.74■□□□□ 0.75
CCM2-201ENST00000258781 TCTAP57738 103 aa19.74■□□□□ 0.75
CCM2-201ENST00000258781 TRGV2A0A075B6R0 118 aa19.73■□□□□ 0.75
CCM2-201ENST00000258781 PAPPA-AS1Q5QFB9 102 aa19.73■□□□□ 0.75
CCM2-201ENST00000258781 C2orf91Q6ZV80 131 aa19.73■□□□□ 0.75
CCM2-201ENST00000258781 PYGO1Q9Y3Y4 419 aa19.73■□□□□ 0.75
CCM2-201ENST00000258781 IGKV2D-26A0A0A0MRZ7 120 aa19.73■□□□□ 0.75
CCM2-201ENST00000258781 NOTCH1P46531 2555 aa19.72■□□□□ 0.75
CCM2-201ENST00000258781 COTL1Q14019 142 aa19.72■□□□□ 0.75
CCM2-201ENST00000258781 TRBV7-3A0A075B6L6 115 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 G3V4G9 280 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 SIVA1O15304 175 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 APOC4P55056 127 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 EGFEM1PQ0D2K5 195 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 PCP2Q8IVA1 136 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 NPSP0C0P6 89 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 HINT1P49773 126 aaPredicted RBP19.71■□□□□ 0.75
CCM2-201ENST00000258781 RPL36AP83881 106 aaKnown RBP19.71■□□□□ 0.75
CCM2-201ENST00000258781 RPL36ALQ969Q0 106 aaKnown RBP19.71■□□□□ 0.75
CCM2-201ENST00000258781 CHCHD7Q9BUK0 85 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 X6R8D5 127 aa19.71■□□□□ 0.75
CCM2-201ENST00000258781 IGLV4-69A0A075B6H9 119 aa19.7■□□□□ 0.74
CCM2-201ENST00000258781 ZNRF2Q8NHG8 242 aa19.7■□□□□ 0.74
CCM2-201ENST00000258781 NBEAL1Q6ZS30 2694 aa19.7■□□□□ 0.74
CCM2-201ENST00000258781 COL5A1-AS1Q5SY13 56 aa19.69■□□□□ 0.74
CCM2-201ENST00000258781 SLC25A29Q8N8R3 303 aa19.69■□□□□ 0.74
CCM2-201ENST00000258781 A0A1B0GV90 55 aa19.69■□□□□ 0.74
CCM2-201ENST00000258781 PHLDA1Q8WV24 401 aaPredicted RBP19.69■□□□□ 0.74
CCM2-201ENST00000258781 MGAM2Q2M2H8 2515 aa19.68■□□□□ 0.74
CCM2-201ENST00000258781 IGLV4-3A0A075B6K6 122 aa19.68■□□□□ 0.74
CCM2-201ENST00000258781 LINC00612Q8N6U2 182 aa19.67■□□□□ 0.74
CCM2-201ENST00000258781 IGHV3-38A0A0C4DH36 116 aa19.67■□□□□ 0.74
CCM2-201ENST00000258781 CRYBA4P53673 196 aa19.67■□□□□ 0.74
CCM2-201ENST00000258781 SPANXA1Q9NS26 97 aa19.67■□□□□ 0.74
CCM2-201ENST00000258781 TRBV6-4A0A1B0GX49 114 aa19.66■□□□□ 0.74
CCM2-201ENST00000258781 MPV17L2Q567V2 206 aa19.66■□□□□ 0.74
CCM2-201ENST00000258781 DAZ4Q86SG3 579 aaKnown RBP19.66■□□□□ 0.74
CCM2-201ENST00000258781 OPRPNQ99935 248 aaPredicted RBP19.66■□□□□ 0.74
CCM2-201ENST00000258781 DAZ3Q9NR90 486 aaKnown RBP19.66■□□□□ 0.74
CCM2-201ENST00000258781 C11orf86A6NJI1 115 aa19.65■□□□□ 0.74
CCM2-201ENST00000258781 TMEM97Q5BJF2 176 aa19.65■□□□□ 0.74
CCM2-201ENST00000258781 SAMD5Q5TGI4 173 aa19.65■□□□□ 0.74
CCM2-201ENST00000258781 EMP1P54849 157 aa19.65■□□□□ 0.74
CCM2-201ENST00000258781 UBE2D3P61077 147 aa19.65■□□□□ 0.74
CCM2-201ENST00000258781 UBE2D2P62837 147 aa19.65■□□□□ 0.74
CCM2-201ENST00000258781 VCX2Q9H322 139 aa19.64■□□□□ 0.73
CCM2-201ENST00000258781 DNHD1Q96M86 4753 aa19.64■□□□□ 0.73
CCM2-201ENST00000258781 TRGV4A0A0C4DH28 118 aa19.62■□□□□ 0.73
CCM2-201ENST00000258781 NFE4Q86UQ8 179 aa19.62■□□□□ 0.73
CCM2-201ENST00000258781 UBE2D4Q9Y2X8 147 aa19.62■□□□□ 0.73
CCM2-201ENST00000258781 E9PLD3 99 aa19.62■□□□□ 0.73
CCM2-201ENST00000258781 BVES-AS1Q5T3Y7 98 aa19.62■□□□□ 0.73
CCM2-201ENST00000258781 AMELXQ99217 191 aa19.62■□□□□ 0.73
CCM2-201ENST00000258781 NBEAL2Q6ZNJ1 2754 aa19.62■□□□□ 0.73
CCM2-201ENST00000258781 FHL2Q14192 279 aa19.61■□□□□ 0.73
CCM2-201ENST00000258781 FAM104AQ969W3 186 aa19.61■□□□□ 0.73
CCM2-201ENST00000258781 HIGD1BQ9P298 99 aa19.61■□□□□ 0.73
CCM2-201ENST00000258781 GAGE12JA6NER3 117 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 IGHV4-30-4P0DP06 118 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 GAGE1Q13065 139 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 GAGE4Q13068 117 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 GAGE5Q13069 117 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 DEFB135Q30KP9 77 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 GAGE13Q4V321 117 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 OR11H2Q8NH07 326 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 ZMAT5Q9UDW3 170 aaKnown RBP19.6■□□□□ 0.73
CCM2-201ENST00000258781 IGKV2D-29A0A075B6S2 120 aaPredicted RBP19.6■□□□□ 0.73
CCM2-201ENST00000258781 IGKV2-29A2NJV5 120 aaPredicted RBP19.6■□□□□ 0.73
CCM2-201ENST00000258781 TIMM21Q9BVV7 248 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 TTTY13Q9BZ97 58 aa19.6■□□□□ 0.73
CCM2-201ENST00000258781 HERVK_113P61574 105 aa19.59■□□□□ 0.73
CCM2-201ENST00000258781 TRAV8-6A0A0B4J262 113 aa19.58■□□□□ 0.72
CCM2-201ENST00000258781 LYRM9A8MSI8 78 aa19.57■□□□□ 0.72
CCM2-201ENST00000258781 HSD52Q0P140 79 aa19.57■□□□□ 0.72
CCM2-201ENST00000258781 PRADC1Q9BSG0 188 aa19.57■□□□□ 0.72
CCM2-201ENST00000258781 CHAC1Q9BUX1 264 aa19.57■□□□□ 0.72
CCM2-201ENST00000258781 DEFB130BP0DP73 79 aa19.56■□□□□ 0.72
CCM2-201ENST00000258781 DEFB130AP0DP74 79 aa19.56■□□□□ 0.72
CCM2-201ENST00000258781 CEMP1Q6PRD7 247 aaPredicted RBP19.56■□□□□ 0.72
CCM2-201ENST00000258781 MAPKAPK5-AS1Q8N8E1 139 aa19.56■□□□□ 0.72
CCM2-201ENST00000258781 GTSF1LQ9H1H1 148 aa19.56■□□□□ 0.72
CCM2-201ENST00000258781 TRBV25-1A0A075B6N4 114 aa19.55■□□□□ 0.72
CCM2-201ENST00000258781 MRPS36P82909 103 aaKnown RBP19.55■□□□□ 0.72
CCM2-201ENST00000258781 TMEM170BQ5T4T1 132 aa19.54■□□□□ 0.72
CCM2-201ENST00000258781 NTM-AS1Q6ZSK4 140 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms