RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 OPRPNQ99935 248 aaPredicted RBP10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 Q9UF83 564 aa10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 DUSP14O95147 198 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 FAM19A4Q96LR4 140 aa10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 PRO0461Q9UI25 63 aa10.78□□□□□ -0.68
TRAFD1-201ENST00000257604 TMEM89A2RUT3 159 aa10.77□□□□□ -0.68
TRAFD1-201ENST00000257604 SDHAF1A6NFY7 115 aa10.77□□□□□ -0.68
TRAFD1-201ENST00000257604 KIR2DL4Q99706 377 aa10.77□□□□□ -0.68
TRAFD1-201ENST00000257604 IGHV3-38A0A0C4DH36 116 aa10.77□□□□□ -0.69
TRAFD1-201ENST00000257604 LGALS9O00182 355 aa10.77□□□□□ -0.69
TRAFD1-201ENST00000257604 STHQ8IWL8 128 aa10.77□□□□□ -0.69
TRAFD1-201ENST00000257604 A6NJY4 79 aa10.77□□□□□ -0.69
TRAFD1-201ENST00000257604 H3BMM0 161 aa10.77□□□□□ -0.69
TRAFD1-201ENST00000257604 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.69
TRAFD1-201ENST00000257604 MT-ATP8P03928 68 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 MAST4O15021 2626 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 INAFM1C9JVW0 142 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 SCGB1C2P0DMR2 95 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 KRTAP1-1Q07627 177 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 TMEM170BQ5T4T1 132 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 NFE4Q86UQ8 179 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 BAALCQ8WXS3 180 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 TP53TG1Q9Y2A0 90 aa10.76□□□□□ -0.69
TRAFD1-201ENST00000257604 SPINK8P0C7L1 97 aa10.75□□□□□ -0.69
TRAFD1-201ENST00000257604 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
TRAFD1-201ENST00000257604 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
TRAFD1-201ENST00000257604 FHL3Q13643 280 aa10.74□□□□□ -0.69
TRAFD1-201ENST00000257604 TAL2Q16559 108 aa10.74□□□□□ -0.69
TRAFD1-201ENST00000257604 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
TRAFD1-201ENST00000257604 LY6G6DO95868 133 aa10.74□□□□□ -0.69
TRAFD1-201ENST00000257604 STAB1Q9NY15 2570 aa10.74□□□□□ -0.69
TRAFD1-201ENST00000257604 ADARB2-AS1A8MUL3 147 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 TOMM6Q96B49 74 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 TRBV20-1A0A075B6N2 111 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 IGHV4-4A0A075B6R2 117 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 NPC2P61916 151 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 FOXI1Q12951 378 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 ORMDL2Q53FV1 153 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 ANAPC13Q9BS18 74 aa10.73□□□□□ -0.69
TRAFD1-201ENST00000257604 C11orf86A6NJI1 115 aa10.72□□□□□ -0.69
TRAFD1-201ENST00000257604 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
TRAFD1-201ENST00000257604 CEMP1Q6PRD7 247 aaPredicted RBP10.72□□□□□ -0.69
TRAFD1-201ENST00000257604 TSPAN13O95857 204 aa10.72□□□□□ -0.69
TRAFD1-201ENST00000257604 PF4P02776 101 aa10.72□□□□□ -0.69
TRAFD1-201ENST00000257604 TRGV1A0A0A0MS02 117 aa10.71□□□□□ -0.69
TRAFD1-201ENST00000257604 Q8N2B8 174 aa10.71□□□□□ -0.69
TRAFD1-201ENST00000257604 LINC00315P59091 139 aa10.71□□□□□ -0.69
TRAFD1-201ENST00000257604 TRAV12-1A0A0B4J245 112 aa10.71□□□□□ -0.7
TRAFD1-201ENST00000257604 TRBV7-9A0A0J9YWB2 115 aa10.71□□□□□ -0.7
TRAFD1-201ENST00000257604 TRRAPQ9Y4A5 3859 aa10.7□□□□□ -0.7
TRAFD1-201ENST00000257604 CRYGDP07320 174 aa10.7□□□□□ -0.7
TRAFD1-201ENST00000257604 CFAP126Q5VTH2 177 aa10.7□□□□□ -0.7
TRAFD1-201ENST00000257604 RNF152Q8N8N0 203 aa10.7□□□□□ -0.7
TRAFD1-201ENST00000257604 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
TRAFD1-201ENST00000257604 TRGV11A0A075B6L2 103 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 XGP55808 180 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 KIF25-AS1Q9Y6Z4 181 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 A0A0U1RRA0 63 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 TCL1BO95988 128 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 SCGB1A1P11684 91 aa10.69□□□□□ -0.7
TRAFD1-201ENST00000257604 ANK3Q12955 4377 aaKnown RBP10.68□□□□□ -0.7
TRAFD1-201ENST00000257604 Q6ZSN1 163 aa10.68□□□□□ -0.7
TRAFD1-201ENST00000257604 VCYO14598 125 aa10.68□□□□□ -0.7
TRAFD1-201ENST00000257604 TSHBP01222 138 aa10.68□□□□□ -0.7
TRAFD1-201ENST00000257604 C9orf85Q96MD7 179 aa10.68□□□□□ -0.7
TRAFD1-201ENST00000257604 TRAV2A0A0B4J234 112 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 NOTCH1P46531 2555 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 INSP01308 110 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 Q1RN00 199 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 TEX29Q8N6K0 151 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 M0QY20 66 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 TMEM86BQ8N661 226 aa10.67□□□□□ -0.7
TRAFD1-201ENST00000257604 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
TRAFD1-201ENST00000257604 UBE2D1P51668 147 aa10.65□□□□□ -0.7
TRAFD1-201ENST00000257604 NDUFA11Q86Y39 141 aa10.65□□□□□ -0.7
TRAFD1-201ENST00000257604 A0A0J9YY99 117 aa10.65□□□□□ -0.7
TRAFD1-201ENST00000257604 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-201ENST00000257604 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
TRAFD1-201ENST00000257604 IGLV4-69A0A075B6H9 119 aa10.65□□□□□ -0.71
TRAFD1-201ENST00000257604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.65□□□□□ -0.71
TRAFD1-201ENST00000257604 IGKV2-29A2NJV5 120 aaPredicted RBP10.65□□□□□ -0.71
TRAFD1-201ENST00000257604 ZNF415Q09FC8 603 aa10.65□□□□□ -0.71
TRAFD1-201ENST00000257604 C9JAW5 83 aa10.64□□□□□ -0.71
TRAFD1-201ENST00000257604 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
TRAFD1-201ENST00000257604 CFC1P0CG37 223 aa10.64□□□□□ -0.71
TRAFD1-201ENST00000257604 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
TRAFD1-201ENST00000257604 SPATA3Q8NHX4 192 aa10.64□□□□□ -0.71
TRAFD1-201ENST00000257604 PRSS2P07478 247 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 HILS1P60008 231 aa10.63□□□□□ -0.71
TRAFD1-201ENST00000257604 Q6ZTI0 123 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms