RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ODF3L2Q3SX64 289 aa9.87□□□□□ -0.83
PRPF38A-201ENST00000257181 DKK2Q9UBU2 259 aa9.87□□□□□ -0.83
PRPF38A-201ENST00000257181 IBA57-AS1B1ANH7 110 aa9.87□□□□□ -0.83
PRPF38A-201ENST00000257181 COX7BP24311 80 aa9.86□□□□□ -0.83
PRPF38A-201ENST00000257181 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
PRPF38A-201ENST00000257181 COX17Q14061 63 aa9.86□□□□□ -0.83
PRPF38A-201ENST00000257181 CEMP1Q6PRD7 247 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-201ENST00000257181 C1orf229Q6ZS94 237 aaPredicted RBP9.86□□□□□ -0.83
PRPF38A-201ENST00000257181 IGHV4-4A0A075B6R2 117 aa9.85□□□□□ -0.83
PRPF38A-201ENST00000257181 EML5Q05BV3 1969 aa9.85□□□□□ -0.83
PRPF38A-201ENST00000257181 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
PRPF38A-201ENST00000257181 SS18L2Q9UHA2 77 aa9.85□□□□□ -0.83
PRPF38A-201ENST00000257181 IGLV5-52A0A0A0MRZ9 124 aa9.84□□□□□ -0.83
PRPF38A-201ENST00000257181 JMJD7-PLA2G4BH0Y9G9 81 aa9.84□□□□□ -0.83
PRPF38A-201ENST00000257181 A0A087WZ39 114 aa9.84□□□□□ -0.83
PRPF38A-201ENST00000257181 C18orf65Q6ZTR6 163 aa9.84□□□□□ -0.83
PRPF38A-201ENST00000257181 LINC01561Q8N1V8 128 aa9.84□□□□□ -0.83
PRPF38A-201ENST00000257181 C9orf153Q5TBE3 101 aa9.84□□□□□ -0.84
PRPF38A-201ENST00000257181 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
PRPF38A-201ENST00000257181 BAALCQ8WXS3 180 aa9.83□□□□□ -0.84
PRPF38A-201ENST00000257181 TRBV30A0A0K0K1B3 111 aa9.83□□□□□ -0.84
PRPF38A-201ENST00000257181 LINC01620Q4KN68 170 aa9.83□□□□□ -0.84
PRPF38A-201ENST00000257181 DHRS4-AS1Q9P1J3 65 aa9.83□□□□□ -0.84
PRPF38A-201ENST00000257181 CEND1Q8N111 149 aa9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 WNK2Q9Y3S1 2297 aa9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 RNASE13Q5GAN3 156 aaKnown RBP9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 MLST8Q9BVC4 326 aa9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 ROS1P08922 2347 aa9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 PCNX3Q9H6A9 2034 aa9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 M0QY20 66 aa9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 E9PLD3 99 aa9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 RPL28P46779 137 aaKnown RBP9.82□□□□□ -0.84
PRPF38A-201ENST00000257181 POM121L12Q8N7R1 296 aa9.81□□□□□ -0.84
PRPF38A-201ENST00000257181 CADP27708 2225 aa9.81□□□□□ -0.84
PRPF38A-201ENST00000257181 MAJINQ3KP22 176 aa9.81□□□□□ -0.84
PRPF38A-201ENST00000257181 Q6ZS46 218 aa9.81□□□□□ -0.84
PRPF38A-201ENST00000257181 UBE2D3P61077 147 aa9.81□□□□□ -0.84
PRPF38A-201ENST00000257181 UBE2D2P62837 147 aa9.81□□□□□ -0.84
PRPF38A-201ENST00000257181 WFDC9Q8NEX5 89 aa9.81□□□□□ -0.84
PRPF38A-201ENST00000257181 PCNX1Q96RV3 2341 aa9.8□□□□□ -0.84
PRPF38A-201ENST00000257181 ACYP1P07311 99 aa9.8□□□□□ -0.84
PRPF38A-201ENST00000257181 RBX1P62877 108 aa9.8□□□□□ -0.84
PRPF38A-201ENST00000257181 IGKV2-24A0A0C4DH68 120 aa9.8□□□□□ -0.84
PRPF38A-201ENST00000257181 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
PRPF38A-201ENST00000257181 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
PRPF38A-201ENST00000257181 TP53TG3Q9ULZ0 132 aa9.8□□□□□ -0.84
PRPF38A-201ENST00000257181 PTPRBP23467 1997 aa9.79□□□□□ -0.84
PRPF38A-201ENST00000257181 CFC1BP0CG36 223 aa9.79□□□□□ -0.84
PRPF38A-201ENST00000257181 CFC1P0CG37 223 aa9.79□□□□□ -0.84
PRPF38A-201ENST00000257181 Q6ZPA2 131 aa9.79□□□□□ -0.84
PRPF38A-201ENST00000257181 SPANXCQ9NY87 97 aa9.79□□□□□ -0.84
PRPF38A-201ENST00000257181 GAGE2AQ6NT46 116 aa9.79□□□□□ -0.84
PRPF38A-201ENST00000257181 HIGD1BQ9P298 99 aa9.79□□□□□ -0.84
PRPF38A-201ENST00000257181 HIGD2BQ4VC39 106 aa9.78□□□□□ -0.84
PRPF38A-201ENST00000257181 FAM19A1Q7Z5A9 133 aa9.78□□□□□ -0.84
PRPF38A-201ENST00000257181 M0R378 163 aa9.78□□□□□ -0.84
PRPF38A-201ENST00000257181 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■■■ 28.7
PRPF38A-201ENST00000257181 IGLV2-18A0A075B6J9 118 aa9.78□□□□□ -0.84
PRPF38A-201ENST00000257181 Q6ZUT4 128 aa9.78□□□□□ -0.84
PRPF38A-201ENST00000257181 MPV17L2Q567V2 206 aa9.77□□□□□ -0.84
PRPF38A-201ENST00000257181 ADCYAP1P18509 176 aa9.77□□□□□ -0.85
PRPF38A-201ENST00000257181 TMEM256-PLSCR3K7ERE1 68 aa9.77□□□□□ -0.85
PRPF38A-201ENST00000257181 NBASA2RRP1 2371 aa9.77□□□□□ -0.85
PRPF38A-201ENST00000257181 C2orf48Q96LS8 159 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 G3V4G9 280 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 TIMM17BO60830 172 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 TRACP01848 142 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 EGFEM1PQ0D2K5 195 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 M0R2N4 97 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 DLEU1O43261 78 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 ZNF80P51504 273 aaPredicted RBP9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 A0A1B0GXF2 115 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 C9JAW5 83 aa9.76□□□□□ -0.85
PRPF38A-201ENST00000257181 GDF5OSQ5U4N7 250 aa9.75□□□□□ -0.85
PRPF38A-201ENST00000257181 DEFB105AQ8NG35 78 aa9.75□□□□□ -0.85
PRPF38A-201ENST00000257181 Q8IZM0 81 aa9.75□□□□□ -0.85
PRPF38A-201ENST00000257181 HIST1H4AP62805 103 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-201ENST00000257181 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-201ENST00000257181 NTN5Q8WTR8 489 aaPredicted RBP9.74□□□□□ -0.85
PRPF38A-201ENST00000257181 ATG2AQ2TAZ0 1938 aa9.74□□□□□ -0.85
PRPF38A-201ENST00000257181 NCR3O14931 201 aa9.74□□□□□ -0.85
PRPF38A-201ENST00000257181 COX8CQ7Z4L0 72 aa9.74□□□□□ -0.85
PRPF38A-201ENST00000257181 ANKRD29Q8N6D5 301 aa9.74□□□□□ -0.85
PRPF38A-201ENST00000257181 TCL1BO95988 128 aa9.73□□□□□ -0.85
PRPF38A-201ENST00000257181 DEFB1P60022 68 aa9.73□□□□□ -0.85
PRPF38A-201ENST00000257181 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
PRPF38A-201ENST00000257181 RPL39P62891 51 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-201ENST00000257181 RNASE8Q8TDE3 154 aaKnown RBP9.73□□□□□ -0.85
PRPF38A-201ENST00000257181 ZNF124Q15973 351 aa9.73□□□□□ -0.85
PRPF38A-201ENST00000257181 LINC00959A0A1B0GUT2 108 aa9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 IGLC3P0DOY3 106 aa9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 Q6ZTC4 211 aa9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 PRB2P02812 416 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 KLK9Q2XQG4 91 aa9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 A0A1B0GUV1 79 aa9.72□□□□□ -0.85
PRPF38A-201ENST00000257181 NDUFS5O43920 106 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms