RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
SNRPA1-201ENST00000254193 CRPP02741 224 aa11.9□□□□□ -0.5
SNRPA1-201ENST00000254193 Q8N814 137 aa11.9□□□□□ -0.5
SNRPA1-201ENST00000254193 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
SNRPA1-201ENST00000254193 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
SNRPA1-201ENST00000254193 RPS10P46783 165 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-201ENST00000254193 CAMPP49913 170 aa11.89□□□□□ -0.51
SNRPA1-201ENST00000254193 CLPSL2Q6UWE3 100 aa11.89□□□□□ -0.51
SNRPA1-201ENST00000254193 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
SNRPA1-201ENST00000254193 SMKR1H3BMG3 65 aa11.88□□□□□ -0.51
SNRPA1-201ENST00000254193 CDK2AP2O75956 126 aa11.88□□□□□ -0.51
SNRPA1-201ENST00000254193 NCR2O95944 276 aa11.88□□□□□ -0.51
SNRPA1-201ENST00000254193 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
SNRPA1-201ENST00000254193 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
SNRPA1-201ENST00000254193 IGLV4-60A0A075B6I1 120 aa11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 UBE2L6O14933 153 aa11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 KRTAP10-1P60331 282 aa11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 MRPL54Q6P161 138 aaKnown RBP11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 C20orf203Q8NBC4 194 aa11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 C1orf43Q9BWL3 253 aa11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 PRR34Q9NV39 138 aa11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 LRP1BQ9NZR2 4599 aa11.87□□□□□ -0.51
SNRPA1-201ENST00000254193 IGLV5-52A0A0A0MRZ9 124 aa11.86□□□□□ -0.51
SNRPA1-201ENST00000254193 I3L3M4 83 aa11.86□□□□□ -0.51
SNRPA1-201ENST00000254193 PMCHP20382 165 aa11.86□□□□□ -0.51
SNRPA1-201ENST00000254193 PNRC1Q12796 327 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-201ENST00000254193 FAM104BQ5XKR9 115 aa11.86□□□□□ -0.51
SNRPA1-201ENST00000254193 NTN5Q8WTR8 489 aaPredicted RBP11.86□□□□□ -0.51
SNRPA1-201ENST00000254193 TMEM70Q9BUB7 260 aa11.86□□□□□ -0.51
SNRPA1-201ENST00000254193 A0A1B0GUV1 79 aa11.85□□□□□ -0.51
SNRPA1-201ENST00000254193 A0A1B0GW15 77 aa11.85□□□□□ -0.51
SNRPA1-201ENST00000254193 MIAQ16674 131 aa11.85□□□□□ -0.51
SNRPA1-201ENST00000254193 MRPL51Q4U2R6 128 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-201ENST00000254193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-201ENST00000254193 IGKV2-29A2NJV5 120 aaPredicted RBP11.84□□□□□ -0.51
SNRPA1-201ENST00000254193 PPP1R2P9O14990 202 aa11.84□□□□□ -0.51
SNRPA1-201ENST00000254193 APCSP02743 223 aa11.84□□□□□ -0.51
SNRPA1-201ENST00000254193 GCSHP23434 173 aa11.84□□□□□ -0.51
SNRPA1-201ENST00000254193 REG3AQ06141 175 aa11.84□□□□□ -0.51
SNRPA1-201ENST00000254193 TMEM242Q9NWH2 141 aa11.84□□□□□ -0.51
SNRPA1-201ENST00000254193 A0A1B0GXF2 115 aa11.83□□□□□ -0.52
SNRPA1-201ENST00000254193 TSHBP01222 138 aa11.83□□□□□ -0.52
SNRPA1-201ENST00000254193 MT-ND4LP03901 98 aa11.83□□□□□ -0.52
SNRPA1-201ENST00000254193 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-201ENST00000254193 HBBP68871 147 aa11.83□□□□□ -0.52
SNRPA1-201ENST00000254193 NRACQ8N912 160 aa11.83□□□□□ -0.52
SNRPA1-201ENST00000254193 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
SNRPA1-201ENST00000254193 UQCC3Q6UW78 93 aa11.82□□□□□ -0.52
SNRPA1-201ENST00000254193 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 TMEM218A2RU14 115 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 HLA-DQA1P01909 254 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 S100A8P05109 93 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 ADCYAP1P18509 176 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 KRTAP26-1Q6PEX3 210 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
SNRPA1-201ENST00000254193 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
SNRPA1-201ENST00000254193 RYR1P21817 5038 aa11.8□□□□□ -0.52
SNRPA1-201ENST00000254193 TRBV27A0A0K0K1C4 114 aa11.8□□□□□ -0.52
SNRPA1-201ENST00000254193 PPP1R17O96001 155 aa11.8□□□□□ -0.52
SNRPA1-201ENST00000254193 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-201ENST00000254193 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
SNRPA1-201ENST00000254193 F8W036 122 aa11.79□□□□□ -0.52
SNRPA1-201ENST00000254193 H7C423 109 aa11.79□□□□□ -0.52
SNRPA1-201ENST00000254193 VCYO14598 125 aa11.79□□□□□ -0.52
SNRPA1-201ENST00000254193 FGF6P10767 208 aa11.79□□□□□ -0.52
SNRPA1-201ENST00000254193 ESDP10768 282 aa11.79□□□□□ -0.52
SNRPA1-201ENST00000254193 CKS2P33552 79 aa11.79□□□□□ -0.52
SNRPA1-201ENST00000254193 COMMD7Q86VX2 200 aa11.79□□□□□ -0.52
SNRPA1-201ENST00000254193 LINC00862A6NCI5 91 aa11.78□□□□□ -0.52
SNRPA1-201ENST00000254193 ATP5L2Q7Z4Y8 100 aa11.78□□□□□ -0.52
SNRPA1-201ENST00000254193 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
SNRPA1-201ENST00000254193 IGKV3OR2-268A0A0C4DH90 116 aa11.77□□□□□ -0.53
SNRPA1-201ENST00000254193 D6R8Y8 96 aa11.77□□□□□ -0.53
SNRPA1-201ENST00000254193 USP17L23D6RBM5 183 aa11.77□□□□□ -0.53
SNRPA1-201ENST00000254193 FCER1GP30273 86 aa11.77□□□□□ -0.53
SNRPA1-201ENST00000254193 TNFRSF6BO95407 300 aa11.76□□□□□ -0.53
SNRPA1-201ENST00000254193 XGP55808 180 aa11.76□□□□□ -0.53
SNRPA1-201ENST00000254193 LINC01620Q4KN68 170 aa11.76□□□□□ -0.53
SNRPA1-201ENST00000254193 C20orf78Q9BR46 151 aa11.76□□□□□ -0.53
SNRPA1-201ENST00000254193 TRBV24-1A0A075B6N3 115 aa11.75□□□□□ -0.53
SNRPA1-201ENST00000254193 KRTAP4-5Q9BYR2 181 aa11.75□□□□□ -0.53
SNRPA1-201ENST00000254193 C7orf77A4D0Y5 90 aa11.74□□□□□ -0.53
SNRPA1-201ENST00000254193 NPYP01303 97 aa11.74□□□□□ -0.53
SNRPA1-201ENST00000254193 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-201ENST00000254193 C14orf177Q52M58 125 aa11.74□□□□□ -0.53
SNRPA1-201ENST00000254193 BTF3L4Q96K17 158 aa11.74□□□□□ -0.53
SNRPA1-201ENST00000254193 KIR2DL4Q99706 377 aa11.74□□□□□ -0.53
SNRPA1-201ENST00000254193 SEC11CQ9BY50 192 aa11.74□□□□□ -0.53
SNRPA1-201ENST00000254193 APOBP04114 4563 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 PPBPP02775 128 aa11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 PRSS1P07477 247 aa11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 HAMPP81172 84 aa11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 HSPG2P98160 4391 aa11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 FAM30AQ9NZY2 134 aa11.73□□□□□ -0.53
SNRPA1-201ENST00000254193 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-201ENST00000254193 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms