RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 EREGO14944 169 aa9.53□□□□□ -0.88
NUP85-201ENST00000245544 DPM2O94777 84 aa9.53□□□□□ -0.88
NUP85-201ENST00000245544 DEFB130BP0DP73 79 aa9.53□□□□□ -0.88
NUP85-201ENST00000245544 DEFB130AP0DP74 79 aa9.53□□□□□ -0.88
NUP85-201ENST00000245544 APOC4P55056 127 aa9.53□□□□□ -0.88
NUP85-201ENST00000245544 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
NUP85-201ENST00000245544 G0S2P27469 103 aa9.52□□□□□ -0.89
NUP85-201ENST00000245544 ZMAT5Q9UDW3 170 aaKnown RBP9.52□□□□□ -0.89
NUP85-201ENST00000245544 LOC100131303A0A0U1RQF7 123 aa9.52□□□□□ -0.89
NUP85-201ENST00000245544 CEMP1Q6PRD7 247 aaPredicted RBP9.52□□□□□ -0.89
NUP85-201ENST00000245544 OR11H2Q8NH07 326 aa9.52□□□□□ -0.89
NUP85-201ENST00000245544 TIMM17AQ99595 171 aa9.52□□□□□ -0.89
NUP85-201ENST00000245544 CHCHD7Q9BUK0 85 aa9.52□□□□□ -0.89
NUP85-201ENST00000245544 SNHG12Q9BXW3 62 aa9.52□□□□□ -0.89
NUP85-201ENST00000245544 CHTOPQ9Y3Y2 248 aaKnown RBP9.52□□□□□ -0.89
NUP85-201ENST00000245544 TRBV7-3A0A075B6L6 115 aa9.51□□□□□ -0.89
NUP85-201ENST00000245544 IGKV2D-26A0A0A0MRZ7 120 aa9.51□□□□□ -0.89
NUP85-201ENST00000245544 F8VRH5 84 aa9.51□□□□□ -0.89
NUP85-201ENST00000245544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.5□□□□□ -0.89
NUP85-201ENST00000245544 IGKV2-29A2NJV5 120 aaPredicted RBP9.5□□□□□ -0.89
NUP85-201ENST00000245544 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
NUP85-201ENST00000245544 GAGE1Q13065 139 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 GAGE4Q13068 117 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 GAGE5Q13069 117 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 FHL2Q14192 279 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 GAGE13Q4V321 117 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 G3V4G9 280 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 COX8AP10176 69 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 SLC25A34Q6PIV7 304 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 PCP2Q8IVA1 136 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 LINC00612Q8N6U2 182 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 TMEM141Q96I45 108 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 CST9LQ9H4G1 147 aa9.5□□□□□ -0.89
NUP85-201ENST00000245544 TRGV4A0A0C4DH28 118 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 IGHV4-28A0A0C4DH34 117 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 TRBV10-1A0A0K0K1A3 114 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 FGF6P10767 208 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 EGFEM1PQ0D2K5 195 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 LINC01549A6NIU2 74 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 NMUP48645 174 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 RPL36AP83881 106 aaKnown RBP9.49□□□□□ -0.89
NUP85-201ENST00000245544 COTL1Q14019 142 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 PMVKQ15126 192 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 RPL36ALQ969Q0 106 aaKnown RBP9.49□□□□□ -0.89
NUP85-201ENST00000245544 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
NUP85-201ENST00000245544 TENM3Q9P273 2699 aa9.48□□□□□ -0.89
NUP85-201ENST00000245544 IGLV4-3A0A075B6K6 122 aa9.48□□□□□ -0.89
NUP85-201ENST00000245544 PLNP26678 52 aa9.48□□□□□ -0.89
NUP85-201ENST00000245544 UBE2D3P61077 147 aa9.48□□□□□ -0.89
NUP85-201ENST00000245544 UBE2D2P62837 147 aa9.48□□□□□ -0.89
NUP85-201ENST00000245544 NTM-AS1Q6ZSK4 140 aa9.48□□□□□ -0.89
NUP85-201ENST00000245544 MGAM2Q2M2H8 2515 aa9.48□□□□□ -0.89
NUP85-201ENST00000245544 TRBV6-4A0A1B0GX49 114 aa9.47□□□□□ -0.89
NUP85-201ENST00000245544 RNASE13Q5GAN3 156 aaKnown RBP9.47□□□□□ -0.89
NUP85-201ENST00000245544 Q8NAQ8 132 aa9.47□□□□□ -0.89
NUP85-201ENST00000245544 M0R143 59 aa9.47□□□□□ -0.89
NUP85-201ENST00000245544 RNF183Q96D59 192 aa9.47□□□□□ -0.89
NUP85-201ENST00000245544 C11orf86A6NJI1 115 aa9.46□□□□□ -0.89
NUP85-201ENST00000245544 LURAP1LQ8IV03 231 aa9.46□□□□□ -0.89
NUP85-201ENST00000245544 CELA1Q9UNI1 258 aa9.46□□□□□ -0.89
NUP85-201ENST00000245544 UBE2D4Q9Y2X8 147 aa9.46□□□□□ -0.89
NUP85-201ENST00000245544 BATFQ16520 125 aa9.46□□□□□ -0.9
NUP85-201ENST00000245544 C2orf91Q6ZV80 131 aa9.46□□□□□ -0.9
NUP85-201ENST00000245544 BOD1L2Q8IYS8 172 aa9.46□□□□□ -0.9
NUP85-201ENST00000245544 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.9
NUP85-201ENST00000245544 CIDEAO60543 219 aa9.45□□□□□ -0.9
NUP85-201ENST00000245544 LINC00694P0DN24 101 aa9.45□□□□□ -0.9
NUP85-201ENST00000245544 RETNQ9HD89 108 aa9.45□□□□□ -0.9
NUP85-201ENST00000245544 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
NUP85-201ENST00000245544 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
NUP85-201ENST00000245544 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
NUP85-201ENST00000245544 LYRM9A8MSI8 78 aa9.44□□□□□ -0.9
NUP85-201ENST00000245544 HINT1P49773 126 aaPredicted RBP9.44□□□□□ -0.9
NUP85-201ENST00000245544 VCX2Q9H322 139 aa9.44□□□□□ -0.9
NUP85-201ENST00000245544 MIFP14174 115 aa9.43□□□□□ -0.9
NUP85-201ENST00000245544 Q6ZUT4 128 aa9.43□□□□□ -0.9
NUP85-201ENST00000245544 MAPKAPK5-AS1Q8N8E1 139 aa9.43□□□□□ -0.9
NUP85-201ENST00000245544 AMELXQ99217 191 aa9.43□□□□□ -0.9
NUP85-201ENST00000245544 PRB2P02812 416 aaPredicted RBP9.42□□□□□ -0.9
NUP85-201ENST00000245544 MPV17L2Q567V2 206 aa9.42□□□□□ -0.9
NUP85-201ENST00000245544 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
NUP85-201ENST00000245544 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
NUP85-201ENST00000245544 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
NUP85-201ENST00000245544 TRAV8-6A0A0B4J262 113 aa9.41□□□□□ -0.9
NUP85-201ENST00000245544 A0A0J9YXV3 536 aa9.41□□□□□ -0.9
NUP85-201ENST00000245544 CRYBA4P53673 196 aa9.41□□□□□ -0.9
NUP85-201ENST00000245544 SAMD5Q5TGI4 173 aa9.41□□□□□ -0.9
NUP85-201ENST00000245544 MDFIQ99750 246 aa9.41□□□□□ -0.9
NUP85-201ENST00000245544 C2orf88Q9BSF0 95 aa9.41□□□□□ -0.9
NUP85-201ENST00000245544 SPANXA1Q9NS26 97 aa9.41□□□□□ -0.9
NUP85-201ENST00000245544 A8MZ25 164 aa9.4□□□□□ -0.9
NUP85-201ENST00000245544 DLEU1O43261 78 aa9.4□□□□□ -0.9
NUP85-201ENST00000245544 GYPEP15421 78 aa9.4□□□□□ -0.9
NUP85-201ENST00000245544 DAD1P61803 113 aa9.4□□□□□ -0.9
NUP85-201ENST00000245544 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms