RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 TSSC4Q9Y5U2 329 aaPredicted RBP15.98■□□□□ 0.15
RNF39-201ENST00000244360 P0DMU3 169 aa15.98■□□□□ 0.15
RNF39-201ENST00000244360 FAM231AP0DMU4 169 aa15.98■□□□□ 0.15
RNF39-201ENST00000244360 FAM231CP0DMU5 169 aa15.98■□□□□ 0.15
RNF39-201ENST00000244360 AMELXQ99217 191 aa15.98■□□□□ 0.15
RNF39-201ENST00000244360 TMEM223A0PJW6 202 aa15.97■□□□□ 0.15
RNF39-201ENST00000244360 A8MWV9 139 aa15.97■□□□□ 0.15
RNF39-201ENST00000244360 APOMO95445 188 aa15.97■□□□□ 0.15
RNF39-201ENST00000244360 HTN1P15515 57 aa15.96■□□□□ 0.15
RNF39-201ENST00000244360 TRBV20-1A0A075B6N2 111 aa15.96■□□□□ 0.15
RNF39-201ENST00000244360 LOC107984156A0A0G2JMH3 177 aa15.96■□□□□ 0.15
RNF39-201ENST00000244360 ODF3L2Q3SX64 289 aa15.96■□□□□ 0.15
RNF39-201ENST00000244360 ARL17AQ8IVW1 177 aa15.96■□□□□ 0.15
RNF39-201ENST00000244360 CCDC168Q8NDH2 2452 aa15.96■□□□□ 0.15
RNF39-201ENST00000244360 INSP01308 110 aa15.95■□□□□ 0.14
RNF39-201ENST00000244360 C11orf72Q8NBR9 251 aa15.95■□□□□ 0.14
RNF39-201ENST00000244360 C1QTNF4Q9BXJ3 329 aa15.95■□□□□ 0.14
RNF39-201ENST00000244360 CCL24O00175 119 aa15.95■□□□□ 0.14
RNF39-201ENST00000244360 CD28P10747 220 aa15.95■□□□□ 0.14
RNF39-201ENST00000244360 PLA2G2AP14555 144 aa15.95■□□□□ 0.14
RNF39-201ENST00000244360 PRM2P04554 102 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 PSMB2P49721 201 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 C10orf126Q8N4M7 172 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 PDZD2O15018 2839 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 CFC1BP0CG36 223 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 CFC1P0CG37 223 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 MTURNQ8N3F0 131 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 C16orf95Q9H693 158 aa15.94■□□□□ 0.14
RNF39-201ENST00000244360 RHODO00212 210 aa15.93■□□□□ 0.14
RNF39-201ENST00000244360 CRYBA4P53673 196 aa15.93■□□□□ 0.14
RNF39-201ENST00000244360 VCX2Q9H322 139 aa15.93■□□□□ 0.14
RNF39-201ENST00000244360 PYGO1Q9Y3Y4 419 aa15.93■□□□□ 0.14
RNF39-201ENST00000244360 IGLV4-3A0A075B6K6 122 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 RNASE1P07998 156 aaKnown RBP15.92■□□□□ 0.14
RNF39-201ENST00000244360 ZNF22P17026 224 aaPredicted RBP15.92■□□□□ 0.14
RNF39-201ENST00000244360 AZU1P20160 251 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 LINC01587Q99440 93 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 A0A1W2PRX2 142 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 C11orf44Q8N8P7 122 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 SPXQ9BT56 116 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 PRO1854Q9UHT4 67 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 CHD6Q8TD26 2715 aa15.92■□□□□ 0.14
RNF39-201ENST00000244360 BEAN1Q3B7T3 259 aa15.91■□□□□ 0.14
RNF39-201ENST00000244360 IGHV3-73A0A0B4J1V6 119 aa15.91■□□□□ 0.14
RNF39-201ENST00000244360 PROK1P58294 105 aa15.91■□□□□ 0.14
RNF39-201ENST00000244360 OPRPNQ99935 248 aaPredicted RBP15.91■□□□□ 0.14
RNF39-201ENST00000244360 GTSF1LQ9H1H1 148 aa15.91■□□□□ 0.14
RNF39-201ENST00000244360 YAE1D1Q9NRH1 226 aa15.91■□□□□ 0.14
RNF39-201ENST00000244360 J3QKU1 62 aa15.9■□□□□ 0.14
RNF39-201ENST00000244360 FOXI1Q12951 378 aa15.9■□□□□ 0.14
RNF39-201ENST00000244360 CITED2Q99967 270 aaPredicted RBP15.9■□□□□ 0.14
RNF39-201ENST00000244360 SMCPP49901 116 aaPredicted RBP15.9■□□□□ 0.14
RNF39-201ENST00000244360 LINC01006Q8NI28 216 aa15.9■□□□□ 0.14
RNF39-201ENST00000244360 ANK3Q12955 4377 aaKnown RBP15.89■□□□□ 0.13
RNF39-201ENST00000244360 NACAE9PAV3 2078 aa15.88■□□□□ 0.13
RNF39-201ENST00000244360 Q6ZSN1 163 aa15.88■□□□□ 0.13
RNF39-201ENST00000244360 A0A0B4J2C4 111 aa15.87■□□□□ 0.13
RNF39-201ENST00000244360 A0A0J9YXV3 536 aa15.87■□□□□ 0.13
RNF39-201ENST00000244360 STHQ8IWL8 128 aa15.87■□□□□ 0.13
RNF39-201ENST00000244360 TNFRSF18Q9Y5U5 241 aa15.87■□□□□ 0.13
RNF39-201ENST00000244360 RS1O15537 224 aa15.86■□□□□ 0.13
RNF39-201ENST00000244360 TCL1BO95988 128 aa15.86■□□□□ 0.13
RNF39-201ENST00000244360 SBSPONQ8IVN8 264 aa15.86■□□□□ 0.13
RNF39-201ENST00000244360 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.86■□□□□ 0.13
RNF39-201ENST00000244360 IGHV3-53P01767 116 aa15.86■□□□□ 0.13
RNF39-201ENST00000244360 INSL3P51460 131 aa15.86■□□□□ 0.13
RNF39-201ENST00000244360 IL17DQ8TAD2 202 aa15.86■□□□□ 0.13
RNF39-201ENST00000244360 XCL2Q9UBD3 114 aa15.86■□□□□ 0.13
RNF39-201ENST00000244360 MRPS36P82909 103 aaKnown RBP15.85■□□□□ 0.13
RNF39-201ENST00000244360 SMAGPQ0VAQ4 97 aa15.85■□□□□ 0.13
RNF39-201ENST00000244360 SFTA2Q6UW10 78 aa15.85■□□□□ 0.13
RNF39-201ENST00000244360 NF1P21359 2839 aa15.85■□□□□ 0.13
RNF39-201ENST00000244360 A4D1N5 150 aa15.84■□□□□ 0.13
RNF39-201ENST00000244360 TEN1Q86WV5 123 aa15.84■□□□□ 0.13
RNF39-201ENST00000244360 C1orf158Q8N1D5 194 aa15.84■□□□□ 0.13
RNF39-201ENST00000244360 ZNF418Q8TF45 676 aaPredicted RBP15.84■□□□□ 0.13
RNF39-201ENST00000244360 PPDPFLQ8WWR9 84 aa15.84■□□□□ 0.13
RNF39-201ENST00000244360 FAM104AQ969W3 186 aa15.84■□□□□ 0.13
RNF39-201ENST00000244360 DNAJC30Q96LL9 226 aa15.84■□□□□ 0.13
RNF39-201ENST00000244360 KMT2BQ9UMN6 2715 aaPredicted RBP15.84■□□□□ 0.13
RNF39-201ENST00000244360 SCGB1C2P0DMR2 95 aa15.83■□□□□ 0.13
RNF39-201ENST00000244360 Q9UF83 564 aa15.83■□□□□ 0.13
RNF39-201ENST00000244360 TMEM263Q8WUH6 116 aaKnown RBP15.83■□□□□ 0.12
RNF39-201ENST00000244360 TIMM21Q9BVV7 248 aa15.83■□□□□ 0.12
RNF39-201ENST00000244360 SPANXA1Q9NS26 97 aa15.82■□□□□ 0.12
RNF39-201ENST00000244360 A0A0J9YXY3 114 aa15.81■□□□□ 0.12
RNF39-201ENST00000244360 M0QXV9 152 aa15.81■□□□□ 0.12
RNF39-201ENST00000244360 IGHV3-33P01772 117 aa15.81■□□□□ 0.12
RNF39-201ENST00000244360 ERG28Q9UKR5 140 aa15.81■□□□□ 0.12
RNF39-201ENST00000244360 IGHV3-64A0A075B6Q5 118 aa15.8■□□□□ 0.12
RNF39-201ENST00000244360 IGHV3-30-3P0DP02 117 aa15.8■□□□□ 0.12
RNF39-201ENST00000244360 MUSTN1Q8IVN3 82 aa15.8■□□□□ 0.12
RNF39-201ENST00000244360 CHCHD7Q9BUK0 85 aa15.8■□□□□ 0.12
RNF39-201ENST00000244360 ACANP16112 2415 aa15.8■□□□□ 0.12
RNF39-201ENST00000244360 CMC4P56277 68 aaPredicted RBP15.8■□□□□ 0.12
RNF39-201ENST00000244360 HILS1P60008 231 aa15.8■□□□□ 0.12
RNF39-201ENST00000244360 IGHV1-58A0A0C4DH39 117 aa15.79■□□□□ 0.12
RNF39-201ENST00000244360 TINCRA0A1B0GVN0 87 aa15.78■□□□□ 0.12
RNF39-201ENST00000244360 NDUFA7O95182 113 aa15.78■□□□□ 0.12
RNF39-201ENST00000244360 ITPR2Q14571 2701 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms