RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 ZNF22P17026 224 aaPredicted RBP10.51□□□□□ -0.73
HIF3A-202ENST00000244303 WFDC11Q8NEX6 87 aa10.51□□□□□ -0.73
HIF3A-202ENST00000244303 VCX2Q9H322 139 aa10.51□□□□□ -0.73
HIF3A-202ENST00000244303 RHODO00212 210 aa10.51□□□□□ -0.73
HIF3A-202ENST00000244303 UBE2D3P61077 147 aa10.51□□□□□ -0.73
HIF3A-202ENST00000244303 UBE2D2P62837 147 aa10.51□□□□□ -0.73
HIF3A-202ENST00000244303 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
HIF3A-202ENST00000244303 CFC1BP0CG36 223 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 CFC1P0CG37 223 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 KHDC1LQ5JSQ8 128 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 HIST2H2BDQ6DRA6 164 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 CDIP1Q9H305 208 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 TCL1BO95988 128 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 PPDPFLQ8WWR9 84 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 GEMIN7Q9H840 131 aaKnown RBP10.5□□□□□ -0.73
HIF3A-202ENST00000244303 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 Q9UF83 564 aa10.5□□□□□ -0.73
HIF3A-202ENST00000244303 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 M0R2P5 195 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 A8MWV9 139 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 CD28P10747 220 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 CRYBA4P53673 196 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
HIF3A-202ENST00000244303 TEN1Q86WV5 123 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 FAM104AQ969W3 186 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
HIF3A-202ENST00000244303 MT-ATP8P03928 68 aa10.48□□□□□ -0.73
HIF3A-202ENST00000244303 ZNF415Q09FC8 603 aa10.48□□□□□ -0.73
HIF3A-202ENST00000244303 Q6ZSN1 163 aa10.48□□□□□ -0.73
HIF3A-202ENST00000244303 C4orf3Q8WVX3 66 aa10.48□□□□□ -0.73
HIF3A-202ENST00000244303 MYO9AB2RTY4 2548 aa10.48□□□□□ -0.73
HIF3A-202ENST00000244303 TRAV2A0A0B4J234 112 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 Q6ZUT4 128 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 C10orf126Q8N4M7 172 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 TMEM86BQ8N661 226 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 DYNLRB2Q8TF09 96 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 PRO1854Q9UHT4 67 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 APCP25054 2843 aa10.47□□□□□ -0.73
HIF3A-202ENST00000244303 FHL3Q13643 280 aa10.46□□□□□ -0.73
HIF3A-202ENST00000244303 RNASE13Q5GAN3 156 aaKnown RBP10.46□□□□□ -0.73
HIF3A-202ENST00000244303 CLUHP3Q96NS8 147 aa10.46□□□□□ -0.73
HIF3A-202ENST00000244303 SPXQ9BT56 116 aa10.46□□□□□ -0.73
HIF3A-202ENST00000244303 XGP55808 180 aa10.46□□□□□ -0.74
HIF3A-202ENST00000244303 LINC01587Q99440 93 aa10.46□□□□□ -0.74
HIF3A-202ENST00000244303 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
HIF3A-202ENST00000244303 A4D1N5 150 aa10.45□□□□□ -0.74
HIF3A-202ENST00000244303 TEX29Q8N6K0 151 aa10.45□□□□□ -0.74
HIF3A-202ENST00000244303 RAX2Q96IS3 184 aa10.45□□□□□ -0.74
HIF3A-202ENST00000244303 MRPS36P82909 103 aaKnown RBP10.45□□□□□ -0.74
HIF3A-202ENST00000244303 Q6ZSV7 163 aa10.45□□□□□ -0.74
HIF3A-202ENST00000244303 C11orf72Q8NBR9 251 aa10.45□□□□□ -0.74
HIF3A-202ENST00000244303 H7C2G1 150 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 IGHV3-30-3P0DP02 117 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 DEFB114Q30KQ6 69 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 CHCHD7Q9BUK0 85 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 DNAJC9-AS1A6NH13 148 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 EIF4EBP3O60516 100 aaPredicted RBP10.44□□□□□ -0.74
HIF3A-202ENST00000244303 MUSTN1Q8IVN3 82 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
HIF3A-202ENST00000244303 CHD6Q8TD26 2715 aa10.43□□□□□ -0.74
HIF3A-202ENST00000244303 NBPF19A0A087WUL8 3843 aa10.43□□□□□ -0.74
HIF3A-202ENST00000244303 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.43□□□□□ -0.74
HIF3A-202ENST00000244303 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
HIF3A-202ENST00000244303 A0A0J9YXY3 114 aa10.43□□□□□ -0.74
HIF3A-202ENST00000244303 IGKV2-29A2NJV5 120 aaPredicted RBP10.43□□□□□ -0.74
HIF3A-202ENST00000244303 ADARB2-AS1A8MUL3 147 aa10.43□□□□□ -0.74
HIF3A-202ENST00000244303 UBE2D4Q9Y2X8 147 aa10.43□□□□□ -0.74
HIF3A-202ENST00000244303 IGHV3-38A0A0C4DH36 116 aa10.42□□□□□ -0.74
HIF3A-202ENST00000244303 INSP01308 110 aa10.42□□□□□ -0.74
HIF3A-202ENST00000244303 PLA2G2AP14555 144 aa10.42□□□□□ -0.74
HIF3A-202ENST00000244303 TLN2Q9Y4G6 2542 aa10.42□□□□□ -0.74
HIF3A-202ENST00000244303 CUBNO60494 3623 aa10.42□□□□□ -0.74
HIF3A-202ENST00000244303 ITPR3Q14573 2671 aa10.42□□□□□ -0.74
HIF3A-202ENST00000244303 C9JAW5 83 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 SLC25A20O43772 301 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 IGHV3-53P01767 116 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 SBSPONQ8IVN8 264 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 TMEM263Q8WUH6 116 aaKnown RBP10.41□□□□□ -0.74
HIF3A-202ENST00000244303 LINC00467Q9BRT7 94 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 ERG28Q9UKR5 140 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 WNK1Q9H4A3 2382 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 J3QKU1 62 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 Q1RN00 199 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 SPANXA1Q9NS26 97 aa10.41□□□□□ -0.74
HIF3A-202ENST00000244303 TMEM262E9PQX1 116 aa10.4□□□□□ -0.74
HIF3A-202ENST00000244303 IGHV3-33P01772 117 aa10.4□□□□□ -0.74
HIF3A-202ENST00000244303 BEAN1Q3B7T3 259 aa10.4□□□□□ -0.74
HIF3A-202ENST00000244303 ESM1Q9NQ30 184 aa10.4□□□□□ -0.74
HIF3A-202ENST00000244303 XCL2Q9UBD3 114 aa10.4□□□□□ -0.74
HIF3A-202ENST00000244303 A0A0B4J2C4 111 aa10.4□□□□□ -0.75
HIF3A-202ENST00000244303 IGHV1-58A0A0C4DH39 117 aa10.4□□□□□ -0.75
HIF3A-202ENST00000244303 ODF3L2Q3SX64 289 aa10.4□□□□□ -0.75
HIF3A-202ENST00000244303 TINCRA0A1B0GVN0 87 aa10.39□□□□□ -0.75
HIF3A-202ENST00000244303 RS1O15537 224 aa10.39□□□□□ -0.75
HIF3A-202ENST00000244303 KRTAP1-1Q07627 177 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms