RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 SPAG8Q99932 426 aaPredicted RBP5.72□□□□□ -1.49
CXCR4-201ENST00000241393 LINC00467Q9BRT7 94 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 TRAV12-2A0A075B6T6 113 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 ZNF815PA8K554 130 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 RPL24P83731 157 aaKnown RBP5.72□□□□□ -1.49
CXCR4-201ENST00000241393 SCGB2A2Q13296 93 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 ZNF56Q15929 161 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 DEFB113Q30KQ7 82 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 MORN3Q6PF18 240 aaPredicted RBP5.72□□□□□ -1.49
CXCR4-201ENST00000241393 C4orf3Q8WVX3 66 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 TNFRSF18Q9Y5U5 241 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 ZNF462Q96JM2 2506 aa5.72□□□□□ -1.49
CXCR4-201ENST00000241393 I3L3M4 83 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 PRB1P04280 392 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 CRYBA4P53673 196 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 RRN3P1Q2M238 152 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 FAM74A4Q5TZK3 123 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 ZNF843Q8N446 348 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 C20orf203Q8NBC4 194 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 NAA38Q9BRA0 125 aaKnown RBP5.71□□□□□ -1.5
CXCR4-201ENST00000241393 SPANXB1Q9NS25 103 aaPredicted RBP5.71□□□□□ -1.5
CXCR4-201ENST00000241393 SELENOKQ9Y6D0 94 aa5.71□□□□□ -1.5
CXCR4-201ENST00000241393 A8MWV9 139 aa5.7□□□□□ -1.5
CXCR4-201ENST00000241393 H3BMM0 161 aa5.7□□□□□ -1.5
CXCR4-201ENST00000241393 K7ERJ3 54 aa5.7□□□□□ -1.5
CXCR4-201ENST00000241393 IGKV3-20P01619 116 aa5.7□□□□□ -1.5
CXCR4-201ENST00000241393 SCGB1D4Q6XE38 83 aa5.7□□□□□ -1.5
CXCR4-201ENST00000241393 PYGO1Q9Y3Y4 419 aa5.7□□□□□ -1.5
CXCR4-201ENST00000241393 EPG5Q9HCE0 2579 aa5.7□□□□□ -1.5
CXCR4-201ENST00000241393 F8W1H4 67 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 G3V4G9 280 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 M0R2P5 195 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 UBE2D1P51668 147 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 DEFB131AP59861 70 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 RPL39P62891 51 aaKnown RBP5.69□□□□□ -1.5
CXCR4-201ENST00000241393 ZNF415Q09FC8 603 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 MAPK1IP1LQ8NDC0 245 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 VPS25Q9BRG1 176 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 LRRK2Q5S007 2527 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 USP9YO00507 2555 aaPredicted RBP5.69□□□□□ -1.5
CXCR4-201ENST00000241393 FAM208BQ5VWN6 2430 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 COL12A1Q99715 3063 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 A0A0J9YY99 117 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 P0DMU3 169 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 FAM231AP0DMU4 169 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 FAM231CP0DMU5 169 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 RPL36AP83881 106 aaKnown RBP5.69□□□□□ -1.5
CXCR4-201ENST00000241393 LYRM7Q5U5X0 104 aa5.69□□□□□ -1.5
CXCR4-201ENST00000241393 CR1P17927 2039 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 AGRNO00468 2067 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 SVEP1Q4LDE5 3571 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 ANKRD17O75179 2603 aaKnown RBP5.68□□□□□ -1.5
CXCR4-201ENST00000241393 TRAV25A0A0B4J276 109 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 KNCNA6PVL3 124 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 LEPROTO15243 131 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 RBMY1A1P0DJD3 496 aaKnown RBP5.68□□□□□ -1.5
CXCR4-201ENST00000241393 RBMY1CP0DJD4 496 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 PLA2G2AP14555 144 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
CXCR4-201ENST00000241393 RBMY1FQ15415 496 aaKnown RBP5.68□□□□□ -1.5
CXCR4-201ENST00000241393 TMEM170BQ5T4T1 132 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 SLC25A29Q8N8R3 303 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 ZNRF2Q8NHG8 242 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 DLX4Q92988 240 aaPredicted RBP5.68□□□□□ -1.5
CXCR4-201ENST00000241393 DNAJC30Q96LL9 226 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 SPXQ9BT56 116 aa5.68□□□□□ -1.5
CXCR4-201ENST00000241393 UBR5O95071 2799 aaPredicted RBP5.68□□□□□ -1.5
CXCR4-201ENST00000241393 CREBBPQ92793 2442 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 A0A1B0GUV1 79 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 TMEM223A0PJW6 202 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 J3QQQ9 107 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 SAP30O75446 220 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 TMEM61Q8N0U2 210 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 DYNLRB2Q8TF09 96 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 VCX2Q9H322 139 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 DOPEY2Q9Y3R5 2298 aa5.67□□□□□ -1.5
CXCR4-201ENST00000241393 IGLV4-3A0A075B6K6 122 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 RBMY1BA6NDE4 496 aaKnown RBP5.66□□□□□ -1.5
CXCR4-201ENST00000241393 RBMY1EA6NEQ0 496 aaKnown RBP5.66□□□□□ -1.5
CXCR4-201ENST00000241393 RBMY1DP0C7P1 496 aaKnown RBP5.66□□□□□ -1.5
CXCR4-201ENST00000241393 LGALS3P17931 250 aaKnown RBP5.66□□□□□ -1.5
CXCR4-201ENST00000241393 DEFB114Q30KQ6 69 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 KLHL30-AS1Q8NEE0 82 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 DUX3Q96PT4 197 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 AMELXQ99217 191 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 J3QR89 54 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 INSP01308 110 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 IGHV3-30P01768 117 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 IGHV3-30-5P0DP03 117 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 ZNF22P17026 224 aaPredicted RBP5.66□□□□□ -1.5
CXCR4-201ENST00000241393 KRTAP10-9P60411 292 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 MRPS36P82909 103 aaKnown RBP5.66□□□□□ -1.5
CXCR4-201ENST00000241393 DEFB136Q30KP8 78 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 C18orf65Q6ZTR6 163 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 CITED2Q99967 270 aaPredicted RBP5.66□□□□□ -1.5
CXCR4-201ENST00000241393 SPANXA1Q9NS26 97 aa5.66□□□□□ -1.5
CXCR4-201ENST00000241393 IGHV3-53P01767 116 aa5.65□□□□□ -1.51
CXCR4-201ENST00000241393 EMP1P54849 157 aa5.65□□□□□ -1.51
CXCR4-201ENST00000241393 TSPEAR-AS2P59090 65 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms