RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 DAND5Q8N907 189 aa4.68□□□□□ -1.66
SGIP1-201ENST00000237247 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.67□□□□□ -1.66
SGIP1-201ENST00000237247 TRBV27A0A0K0K1C4 114 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 IGF1P05019 195 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 RNASE3P12724 160 aaKnown RBP4.67□□□□□ -1.66
SGIP1-201ENST00000237247 SCGB1D4Q6XE38 83 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 C10orf105Q8TEF2 133 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 USMG5Q96IX5 58 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 MOB4Q9Y3A3 225 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 A8MZ25 164 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 VCYO14598 125 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 CD164Q04900 197 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 TACC2O95359 2948 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 TRAV41A0A0B4J266 112 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 SDHAF1A6NFY7 115 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 LST1O00453 97 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 PHLDA3Q9Y5J5 127 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 TRRAPQ9Y4A5 3859 aa4.67□□□□□ -1.66
SGIP1-201ENST00000237247 LEPROTO15243 131 aa4.66□□□□□ -1.66
SGIP1-201ENST00000237247 ECSCRQ19T08 205 aa4.66□□□□□ -1.66
SGIP1-201ENST00000237247 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
SGIP1-201ENST00000237247 RPL39LQ96EH5 51 aaKnown RBP4.66□□□□□ -1.66
SGIP1-201ENST00000237247 TMEM89A2RUT3 159 aa4.66□□□□□ -1.66
SGIP1-201ENST00000237247 ZFP36P26651 326 aaKnown RBP4.66□□□□□ -1.66
SGIP1-201ENST00000237247 RNASE4P34096 147 aaKnown RBP4.66□□□□□ -1.66
SGIP1-201ENST00000237247 LINC01560Q8TB33 94 aa4.66□□□□□ -1.66
SGIP1-201ENST00000237247 K7EMT4 169 aa4.66□□□□□ -1.66
SGIP1-201ENST00000237247 MAP1BP46821 2468 aaKnown RBP4.66□□□□□ -1.66
SGIP1-201ENST00000237247 TRIAP1O43715 76 aa4.65□□□□□ -1.66
SGIP1-201ENST00000237247 PRB4P10163 310 aaPredicted RBP4.65□□□□□ -1.66
SGIP1-201ENST00000237247 Q6ZRU5 148 aa4.65□□□□□ -1.66
SGIP1-201ENST00000237247 IGSF10Q6WRI0 2623 aa4.65□□□□□ -1.66
SGIP1-201ENST00000237247 URB1O60287 2271 aaKnown RBP4.65□□□□□ -1.67
SGIP1-201ENST00000237247 S100A4P26447 101 aaKnown RBP4.65□□□□□ -1.67
SGIP1-201ENST00000237247 SAA4P35542 130 aa4.65□□□□□ -1.67
SGIP1-201ENST00000237247 FHL2Q14192 279 aa4.65□□□□□ -1.67
SGIP1-201ENST00000237247 IL17DQ8TAD2 202 aa4.65□□□□□ -1.67
SGIP1-201ENST00000237247 COPS9Q8WXC6 57 aa4.65□□□□□ -1.67
SGIP1-201ENST00000237247 SUMO4Q6EEV6 95 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 C14orf178Q8N769 122 aaPredicted RBP4.64□□□□□ -1.67
SGIP1-201ENST00000237247 CEP250Q9BV73 2442 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 GVINP1Q7Z2Y8 2422 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 TIMM21Q9BVV7 248 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 ADORA2A-AS1P86434 159 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 Q6ZS46 218 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 LINC00482Q8N8I6 264 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 DNAH7Q8WXX0 4024 aa4.64□□□□□ -1.67
SGIP1-201ENST00000237247 G3V318 75 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 MGPP08493 103 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 SYNJ2BPP57105 145 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 TSPEAR-AS2P59090 65 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 CFHR3Q02985 330 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 PIK3CD-AS1Q5SR53 167 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 Q6JHZ5 121 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 PRR15Q8IV56 129 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 TPRP12270 2363 aaKnown RBP4.63□□□□□ -1.67
SGIP1-201ENST00000237247 LMO4P61968 165 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 IGHV3-66A0A0C4DH42 116 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 IGHV4-39P01824 125 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 IGHG2P01859 326 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 ICOSQ9Y6W8 199 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 IGHV3OR16-8A0A075B7F1 116 aa4.63□□□□□ -1.67
SGIP1-201ENST00000237247 LGALS3P17931 250 aaKnown RBP4.63□□□□□ -1.67
SGIP1-201ENST00000237247 IGHV3-35A0A0C4DH35 117 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 BCE1O60756 84 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 TIMM17BO60830 172 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 IGLV1-40P01703 118 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 COX6CP09669 75 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 GRNP28799 593 aaKnown RBP4.62□□□□□ -1.67
SGIP1-201ENST00000237247 FAM222AQ5U5X8 452 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 LAMTOR3Q9UHA4 124 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 IGHV3-16A0A0C4DH30 117 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 KLK15Q9H2R5 256 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 M0QY20 66 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 UNQ9165/PRO28630Q6UXU0 137 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 ACACAQ13085 2346 aa4.62□□□□□ -1.67
SGIP1-201ENST00000237247 A0A096LNT2 108 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 A0A0J9YXY3 114 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 LY6HO94772 140 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 KLHL30-AS1Q8NEE0 82 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 DAZ1Q9NQZ3 744 aaKnown RBP4.61□□□□□ -1.67
SGIP1-201ENST00000237247 IGHV3OR16-10A0A075B7F0 116 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 A6NDX4 124 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 KNCNA6PVL3 124 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 A8MTW9 85 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 USP17L23D6RBM5 183 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 CCL21O00585 134 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 GNRH2O43555 120 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 WFDC11Q8NEX6 87 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 Q96MF0 132 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 H7BZZ5 65 aa4.61□□□□□ -1.67
SGIP1-201ENST00000237247 PRKDCP78527 4128 aaKnown RBP4.61□□□□□ -1.67
SGIP1-201ENST00000237247 TRBV7-6A0A0J9YX20 115 aa4.6□□□□□ -1.67
SGIP1-201ENST00000237247 ATP5EP56381 51 aaPredicted RBP4.6□□□□□ -1.67
SGIP1-201ENST00000237247 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
SGIP1-201ENST00000237247 LITAFQ99732 161 aa4.6□□□□□ -1.67
SGIP1-201ENST00000237247 TMEM243Q9BU79 118 aa4.6□□□□□ -1.67
SGIP1-201ENST00000237247 I3L3M4 83 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms