RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
GAPDH-201ENST00000229239 TTTY13Q9BZ97 58 aa12.24□□□□□ -0.45
GAPDH-201ENST00000229239 P0DMU3 169 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 FAM231AP0DMU4 169 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 FAM231CP0DMU5 169 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 GCSHP23434 173 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 PRADC1Q9BSG0 188 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 SAP30O75446 220 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 IGLV1-51P01701 117 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 GTF2H5Q6ZYL4 71 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 OR4C5Q8NGB2 326 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 IL17DQ8TAD2 202 aa12.23□□□□□ -0.45
GAPDH-201ENST00000229239 XCL2Q9UBD3 114 aa12.22□□□□□ -0.45
GAPDH-201ENST00000229239 ADARB2-AS1A8MUL3 147 aa12.21□□□□□ -0.45
GAPDH-201ENST00000229239 C1orf158Q8N1D5 194 aa12.21□□□□□ -0.45
GAPDH-201ENST00000229239 AMMECR1LQ6DCA0 310 aa12.21□□□□□ -0.46
GAPDH-201ENST00000229239 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.46
GAPDH-201ENST00000229239 VCX2Q9H322 139 aa12.21□□□□□ -0.46
GAPDH-201ENST00000229239 HIST1H4GQ99525 98 aa12.2□□□□□ -0.46
GAPDH-201ENST00000229239 IGHV3-73A0A0B4J1V6 119 aa12.19□□□□□ -0.46
GAPDH-201ENST00000229239 CIDEAO60543 219 aa12.19□□□□□ -0.46
GAPDH-201ENST00000229239 NDUFA11Q86Y39 141 aa12.19□□□□□ -0.46
GAPDH-201ENST00000229239 TMEM263Q8WUH6 116 aaKnown RBP12.19□□□□□ -0.46
GAPDH-201ENST00000229239 SPANXA1Q9NS26 97 aa12.19□□□□□ -0.46
GAPDH-201ENST00000229239 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
GAPDH-201ENST00000229239 ZNF815PA8K554 130 aa12.19□□□□□ -0.46
GAPDH-201ENST00000229239 PRM2P04554 102 aa12.19□□□□□ -0.46
GAPDH-201ENST00000229239 SHISA2Q6UWI4 295 aa12.19□□□□□ -0.46
GAPDH-201ENST00000229239 FXYD2P54710 66 aa12.18□□□□□ -0.46
GAPDH-201ENST00000229239 RNASE8Q8TDE3 154 aaKnown RBP12.18□□□□□ -0.46
GAPDH-201ENST00000229239 TRBV10-1A0A0K0K1A3 114 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 IGLV4-3A0A075B6K6 122 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 TMEM238LA0A1B0GVL6 79 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 A6NJY4 79 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 K7EP13 123 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 AZU1P20160 251 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 TMEM170BQ5T4T1 132 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 DEFB104AQ8WTQ1 72 aa12.17□□□□□ -0.46
GAPDH-201ENST00000229239 PKD1L1Q8TDX9 2849 aa12.16□□□□□ -0.46
GAPDH-201ENST00000229239 DAZ2Q13117 558 aaKnown RBP12.16□□□□□ -0.46
GAPDH-201ENST00000229239 COTL1Q14019 142 aa12.16□□□□□ -0.46
GAPDH-201ENST00000229239 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
GAPDH-201ENST00000229239 Q6ZSN1 163 aa12.16□□□□□ -0.46
GAPDH-201ENST00000229239 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
GAPDH-201ENST00000229239 AMELXQ99217 191 aa12.16□□□□□ -0.46
GAPDH-201ENST00000229239 A0A1W2PPM0 123 aa12.15□□□□□ -0.46
GAPDH-201ENST00000229239 H3BUT2 72 aa12.15□□□□□ -0.46
GAPDH-201ENST00000229239 FABP2P12104 132 aa12.15□□□□□ -0.46
GAPDH-201ENST00000229239 C19orf73Q9NVV2 129 aa12.15□□□□□ -0.46
GAPDH-201ENST00000229239 OR5A1Q8NGJ0 315 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 C16orf74Q96GX8 76 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 TRAV4A0A0B4J268 109 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 K7EP34 96 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 LEPROTO15243 131 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 SAMD5Q5TGI4 173 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 TIMM21Q9BVV7 248 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 TRRAPQ9Y4A5 3859 aa12.14□□□□□ -0.47
GAPDH-201ENST00000229239 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
GAPDH-201ENST00000229239 TRGV1A0A0A0MS02 117 aa12.13□□□□□ -0.47
GAPDH-201ENST00000229239 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
GAPDH-201ENST00000229239 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
GAPDH-201ENST00000229239 PHLDA1Q8WV24 401 aaPredicted RBP12.13□□□□□ -0.47
GAPDH-201ENST00000229239 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
GAPDH-201ENST00000229239 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
GAPDH-201ENST00000229239 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
GAPDH-201ENST00000229239 MGAM2Q2M2H8 2515 aa12.13□□□□□ -0.47
GAPDH-201ENST00000229239 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
GAPDH-201ENST00000229239 EMP1P54849 157 aa12.12□□□□□ -0.47
GAPDH-201ENST00000229239 MRPS36P82909 103 aaKnown RBP12.12□□□□□ -0.47
GAPDH-201ENST00000229239 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
GAPDH-201ENST00000229239 J3QQQ9 107 aa12.12□□□□□ -0.47
GAPDH-201ENST00000229239 GIG44P09565 113 aaPredicted RBP12.12□□□□□ -0.47
GAPDH-201ENST00000229239 OPRPNQ99935 248 aaPredicted RBP12.12□□□□□ -0.47
GAPDH-201ENST00000229239 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
GAPDH-201ENST00000229239 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
GAPDH-201ENST00000229239 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
GAPDH-201ENST00000229239 DAZ4Q86SG3 579 aaKnown RBP12.11□□□□□ -0.47
GAPDH-201ENST00000229239 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
GAPDH-201ENST00000229239 DAZ3Q9NR90 486 aaKnown RBP12.11□□□□□ -0.47
GAPDH-201ENST00000229239 UBE2D4Q9Y2X8 147 aa12.11□□□□□ -0.47
GAPDH-201ENST00000229239 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
GAPDH-201ENST00000229239 INSL3P51460 131 aa12.1□□□□□ -0.47
GAPDH-201ENST00000229239 SRSF9Q13242 221 aaKnown RBP eCLIP12.1□□□□□ -0.47
GAPDH-201ENST00000229239 A0A0J9YY99 117 aa12.1□□□□□ -0.47
GAPDH-201ENST00000229239 PF4P02776 101 aa12.1□□□□□ -0.47
GAPDH-201ENST00000229239 LINC00482Q8N8I6 264 aa12.1□□□□□ -0.47
GAPDH-201ENST00000229239 TINCRA0A1B0GVN0 87 aa12.09□□□□□ -0.47
GAPDH-201ENST00000229239 K7EQD1 137 aa12.09□□□□□ -0.47
GAPDH-201ENST00000229239 SLC25A29Q8N8R3 303 aa12.09□□□□□ -0.47
GAPDH-201ENST00000229239 CITED1Q99966 193 aa12.09□□□□□ -0.47
GAPDH-201ENST00000229239 OVOL2Q9BRP0 275 aa12.09□□□□□ -0.47
GAPDH-201ENST00000229239 SPCS1Q9Y6A9 102 aa12.09□□□□□ -0.47
GAPDH-201ENST00000229239 CMYA5Q8N3K9 4069 aa12.08□□□□□ -0.47
GAPDH-201ENST00000229239 GAGE12BA1L429 117 aa12.08□□□□□ -0.48
GAPDH-201ENST00000229239 KRTAP10-3P60369 221 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms