RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 MXRA5Q9NR99 2828 aa11.89□□□□□ -0.51
LTBR-201ENST00000228918 TCL1BO95988 128 aa11.89□□□□□ -0.51
LTBR-201ENST00000228918 CD28P10747 220 aa11.89□□□□□ -0.51
LTBR-201ENST00000228918 TRAV2A0A0B4J234 112 aa11.88□□□□□ -0.51
LTBR-201ENST00000228918 DUX3Q96PT4 197 aa11.88□□□□□ -0.51
LTBR-201ENST00000228918 A4D1N5 150 aa11.88□□□□□ -0.51
LTBR-201ENST00000228918 A8MWV9 139 aa11.88□□□□□ -0.51
LTBR-201ENST00000228918 M0R2P5 195 aa11.88□□□□□ -0.51
LTBR-201ENST00000228918 TRBV20-1A0A075B6N2 111 aa11.87□□□□□ -0.51
LTBR-201ENST00000228918 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
LTBR-201ENST00000228918 PRM2P04554 102 aa11.87□□□□□ -0.51
LTBR-201ENST00000228918 PIK3CD-AS1Q5SR53 167 aa11.87□□□□□ -0.51
LTBR-201ENST00000228918 TMEM61Q8N0U2 210 aa11.87□□□□□ -0.51
LTBR-201ENST00000228918 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
LTBR-201ENST00000228918 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
LTBR-201ENST00000228918 Q8N2B8 174 aa11.86□□□□□ -0.51
LTBR-201ENST00000228918 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
LTBR-201ENST00000228918 PRRC2AP48634 2157 aaKnown RBP11.85□□□□□ -0.51
LTBR-201ENST00000228918 ANAPC13Q9BS18 74 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 A0A0B4J2C4 111 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 IGHV3-30-3P0DP02 117 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
LTBR-201ENST00000228918 Q6ZSN1 163 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 TMEM263Q8WUH6 116 aaKnown RBP11.85□□□□□ -0.51
LTBR-201ENST00000228918 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 Q9UF83 564 aa11.85□□□□□ -0.51
LTBR-201ENST00000228918 A0A0J9YXY3 114 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 SPXQ9BT56 116 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 TIMM21Q9BVV7 248 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 FAM208BQ5VWN6 2430 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 IGHV3-33P01772 117 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 GAGE5Q13069 117 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 GAGE6Q13070 117 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 ZFAND6Q6FIF0 208 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 C4orf3Q8WVX3 66 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 CITED1Q99966 193 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 CHCHD7Q9BUK0 85 aa11.84□□□□□ -0.51
LTBR-201ENST00000228918 C11orf72Q8NBR9 251 aa11.83□□□□□ -0.52
LTBR-201ENST00000228918 SS18L2Q9UHA2 77 aa11.83□□□□□ -0.52
LTBR-201ENST00000228918 TMEM262E9PQX1 116 aa11.83□□□□□ -0.52
LTBR-201ENST00000228918 SCGB1C2P0DMR2 95 aa11.83□□□□□ -0.52
LTBR-201ENST00000228918 RNASE13Q5GAN3 156 aaKnown RBP11.83□□□□□ -0.52
LTBR-201ENST00000228918 LINC00467Q9BRT7 94 aa11.82□□□□□ -0.52
LTBR-201ENST00000228918 SPANXA1Q9NS26 97 aa11.82□□□□□ -0.52
LTBR-201ENST00000228918 UBE2D4Q9Y2X8 147 aa11.82□□□□□ -0.52
LTBR-201ENST00000228918 TRAV8-3A0A0A6YYJ7 113 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 ANKRD29Q8N6D5 301 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 TEX29Q8N6K0 151 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 RAX2Q96IS3 184 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 LITAFQ99732 161 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
LTBR-201ENST00000228918 IGHV1-58A0A0C4DH39 117 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 DYNLRB2Q8TF09 96 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 LINC01587Q99440 93 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 CENPEQ02224 2701 aa11.81□□□□□ -0.52
LTBR-201ENST00000228918 TINCRA0A1B0GVN0 87 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 ADARB2-AS1A8MUL3 147 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 IGHV3-53P01767 116 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 NHLRC4P0CG21 123 aaPredicted RBP11.8□□□□□ -0.52
LTBR-201ENST00000228918 KHDC1LQ5JSQ8 128 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 PTPN13Q12923 2485 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 LRRK2Q5S007 2527 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
LTBR-201ENST00000228918 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
LTBR-201ENST00000228918 INSP01308 110 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 KRTAP10-9P60411 292 aa11.8□□□□□ -0.52
LTBR-201ENST00000228918 PRB1P04280 392 aa11.79□□□□□ -0.52
LTBR-201ENST00000228918 DEFB114Q30KQ6 69 aa11.79□□□□□ -0.52
LTBR-201ENST00000228918 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
LTBR-201ENST00000228918 DNAJC30Q96LL9 226 aa11.79□□□□□ -0.52
LTBR-201ENST00000228918 AKAP9Q99996 3911 aa11.79□□□□□ -0.52
LTBR-201ENST00000228918 MYO9AB2RTY4 2548 aa11.79□□□□□ -0.52
LTBR-201ENST00000228918 M0QXV9 152 aa11.79□□□□□ -0.52
LTBR-201ENST00000228918 ZFYVE26Q68DK2 2539 aa11.78□□□□□ -0.52
LTBR-201ENST00000228918 VSIG2Q96IQ7 327 aa11.78□□□□□ -0.52
LTBR-201ENST00000228918 ZNF462Q96JM2 2506 aa11.78□□□□□ -0.52
LTBR-201ENST00000228918 H7C2G1 150 aa11.77□□□□□ -0.52
LTBR-201ENST00000228918 RS1O15537 224 aa11.77□□□□□ -0.52
LTBR-201ENST00000228918 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.52
LTBR-201ENST00000228918 TEX15Q9BXT5 2789 aa11.77□□□□□ -0.52
LTBR-201ENST00000228918 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
LTBR-201ENST00000228918 DEFB113Q30KQ7 82 aa11.77□□□□□ -0.53
LTBR-201ENST00000228918 SPANXDQ9BXN6 97 aa11.77□□□□□ -0.53
LTBR-201ENST00000228918 SPANXCQ9NY87 97 aa11.77□□□□□ -0.53
LTBR-201ENST00000228918 B5MCH6 92 aa11.76□□□□□ -0.53
LTBR-201ENST00000228918 HIST2H2BDQ6DRA6 164 aa11.76□□□□□ -0.53
LTBR-201ENST00000228918 NAV2Q8IVL1 2488 aa11.76□□□□□ -0.53
LTBR-201ENST00000228918 KMT2BQ9UMN6 2715 aaPredicted RBP11.76□□□□□ -0.53
LTBR-201ENST00000228918 SLC25A20O43772 301 aa11.75□□□□□ -0.53
LTBR-201ENST00000228918 Q1RN00 199 aa11.75□□□□□ -0.53
LTBR-201ENST00000228918 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
LTBR-201ENST00000228918 UBR5O95071 2799 aaPredicted RBP11.75□□□□□ -0.53
LTBR-201ENST00000228918 C9JAW5 83 aa11.75□□□□□ -0.53
LTBR-201ENST00000228918 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
LTBR-201ENST00000228918 A8MZ25 164 aa11.74□□□□□ -0.53
LTBR-201ENST00000228918 MIAQ16674 131 aa11.74□□□□□ -0.53
LTBR-201ENST00000228918 ODF3L2Q3SX64 289 aa11.74□□□□□ -0.53
LTBR-201ENST00000228918 LRRC75A-AS1Q8N1F1 130 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms