RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 RBMY1CP0DJD4 496 aa11.29□□□□□ -0.6
VTN-201ENST00000226218 PSMB8P28062 276 aa11.29□□□□□ -0.6
VTN-201ENST00000226218 RBMY1FQ15415 496 aaKnown RBP11.29□□□□□ -0.6
VTN-201ENST00000226218 UBE2D4Q9Y2X8 147 aa11.29□□□□□ -0.6
VTN-201ENST00000226218 ZFHX2Q9C0A1 2572 aaPredicted RBP11.28□□□□□ -0.6
VTN-201ENST00000226218 PROK1P58294 105 aa11.28□□□□□ -0.6
VTN-201ENST00000226218 RNASE13Q5GAN3 156 aaKnown RBP11.28□□□□□ -0.6
VTN-201ENST00000226218 DOPEY2Q9Y3R5 2298 aa11.28□□□□□ -0.6
VTN-201ENST00000226218 IGHV4-61A0A0C4DH41 118 aa11.27□□□□□ -0.6
VTN-201ENST00000226218 TRBV7-7A0A0K0K1E9 115 aa11.27□□□□□ -0.6
VTN-201ENST00000226218 YAE1D1Q9NRH1 226 aa11.27□□□□□ -0.6
VTN-201ENST00000226218 SPANXA1Q9NS26 97 aa11.27□□□□□ -0.6
VTN-201ENST00000226218 NPC2P61916 151 aa11.26□□□□□ -0.61
VTN-201ENST00000226218 COL6A6A6NMZ7 2263 aa11.26□□□□□ -0.61
VTN-201ENST00000226218 TMEM95Q3KNT9 176 aa11.26□□□□□ -0.61
VTN-201ENST00000226218 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
VTN-201ENST00000226218 NBASA2RRP1 2371 aa11.25□□□□□ -0.61
VTN-201ENST00000226218 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
VTN-201ENST00000226218 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
VTN-201ENST00000226218 Q9UF83 564 aa11.25□□□□□ -0.61
VTN-201ENST00000226218 IGHV3-73A0A0B4J1V6 119 aa11.24□□□□□ -0.61
VTN-201ENST00000226218 SPTA1P02549 2419 aa11.24□□□□□ -0.61
VTN-201ENST00000226218 NDUFA1O15239 70 aa11.24□□□□□ -0.61
VTN-201ENST00000226218 FAM110AQ9BQ89 295 aa11.24□□□□□ -0.61
VTN-201ENST00000226218 CELSR1Q9NYQ6 3014 aa11.24□□□□□ -0.61
VTN-201ENST00000226218 TNFRSF18Q9Y5U5 241 aa11.23□□□□□ -0.61
VTN-201ENST00000226218 C10orf99Q6UWK7 81 aa11.23□□□□□ -0.61
VTN-201ENST00000226218 Q6ZSN1 163 aa11.23□□□□□ -0.61
VTN-201ENST00000226218 A8MTW9 85 aa11.22□□□□□ -0.61
VTN-201ENST00000226218 TIRAPP58753 221 aa11.22□□□□□ -0.61
VTN-201ENST00000226218 SPTAN1Q13813 2472 aaKnown RBP11.22□□□□□ -0.61
VTN-201ENST00000226218 PIK3CD-AS1Q5SR53 167 aa11.22□□□□□ -0.61
VTN-201ENST00000226218 LINC00467Q9BRT7 94 aa11.22□□□□□ -0.61
VTN-201ENST00000226218 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
VTN-201ENST00000226218 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.21□□□□□ -0.61
VTN-201ENST00000226218 IGKV2-29A2NJV5 120 aaPredicted RBP11.21□□□□□ -0.61
VTN-201ENST00000226218 C19orf84I3L1E1 186 aa11.21□□□□□ -0.61
VTN-201ENST00000226218 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.21□□□□□ -0.61
VTN-201ENST00000226218 DAND5Q8N907 189 aa11.21□□□□□ -0.61
VTN-201ENST00000226218 PIMREGQ9BSJ6 248 aa11.21□□□□□ -0.61
VTN-201ENST00000226218 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.62
VTN-201ENST00000226218 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
VTN-201ENST00000226218 C10orf105Q8TEF2 133 aa11.2□□□□□ -0.62
VTN-201ENST00000226218 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
VTN-201ENST00000226218 AKAP6Q13023 2319 aa11.2□□□□□ -0.62
VTN-201ENST00000226218 VPS13CQ709C8 3753 aa11.2□□□□□ -0.62
VTN-201ENST00000226218 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
VTN-201ENST00000226218 IGLV5-39A0A0G2JS06 123 aa11.19□□□□□ -0.62
VTN-201ENST00000226218 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
VTN-201ENST00000226218 CEP295Q9C0D2 2601 aa11.19□□□□□ -0.62
VTN-201ENST00000226218 COX7A2LO14548 114 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 ACYP1P07311 99 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 UCNP55089 124 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 SYNJ2BPP57105 145 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 IMUPQ9GZP8 106 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 RBMY1BA6NDE4 496 aaKnown RBP11.18□□□□□ -0.62
VTN-201ENST00000226218 RBMY1EA6NEQ0 496 aaKnown RBP11.18□□□□□ -0.62
VTN-201ENST00000226218 RBMY1DP0C7P1 496 aaKnown RBP11.18□□□□□ -0.62
VTN-201ENST00000226218 SHISA2Q6UWI4 295 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 LINC01587Q99440 93 aa11.18□□□□□ -0.62
VTN-201ENST00000226218 AVPP01185 164 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 BEAN1Q3B7T3 259 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 SDIM1Q6ZPB5 146 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 PRORYQ9H606 182 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 IGHV3-53P01767 116 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 PRM2P04554 102 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 COX6A2Q02221 97 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 SMIM20Q8N5G0 67 aa11.17□□□□□ -0.62
VTN-201ENST00000226218 SORL1Q92673 2214 aa11.16□□□□□ -0.62
VTN-201ENST00000226218 SOSTDC1Q6X4U4 206 aa11.16□□□□□ -0.62
VTN-201ENST00000226218 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
VTN-201ENST00000226218 SMCR5Q8TEV8 140 aa11.16□□□□□ -0.62
VTN-201ENST00000226218 ATRXP46100 2492 aa11.16□□□□□ -0.62
VTN-201ENST00000226218 IGHV3OR16-12A0A075B7B8 117 aa11.15□□□□□ -0.62
VTN-201ENST00000226218 MSMBP08118 114 aa11.15□□□□□ -0.62
VTN-201ENST00000226218 HTN1P15515 57 aa11.15□□□□□ -0.62
VTN-201ENST00000226218 ZNF415Q09FC8 603 aa11.15□□□□□ -0.62
VTN-201ENST00000226218 IGHV3-38A0A0C4DH36 116 aa11.15□□□□□ -0.62
VTN-201ENST00000226218 CIRBPQ14011 172 aaKnown RBP11.15□□□□□ -0.62
VTN-201ENST00000226218 Q9H8V8 135 aa11.15□□□□□ -0.62
VTN-201ENST00000226218 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
VTN-201ENST00000226218 IGHV4-30-2A0A087WSY4 118 aa11.14□□□□□ -0.63
VTN-201ENST00000226218 Q8N2B8 174 aa11.14□□□□□ -0.63
VTN-201ENST00000226218 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
VTN-201ENST00000226218 HERV-K104P63124 156 aa11.14□□□□□ -0.63
VTN-201ENST00000226218 LINC00242Q5T6M2 205 aa11.14□□□□□ -0.63
VTN-201ENST00000226218 DUX5Q96PT3 197 aa11.14□□□□□ -0.63
VTN-201ENST00000226218 IGHV4-59P01825 116 aa11.13□□□□□ -0.63
VTN-201ENST00000226218 HOXD3P31249 432 aaPredicted RBP11.13□□□□□ -0.63
VTN-201ENST00000226218 TRACP01848 142 aa11.12□□□□□ -0.63
VTN-201ENST00000226218 HERVK_113P63121 156 aa11.12□□□□□ -0.63
VTN-201ENST00000226218 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
VTN-201ENST00000226218 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
VTN-201ENST00000226218 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
VTN-201ENST00000226218 RS1O15537 224 aa11.12□□□□□ -0.63
VTN-201ENST00000226218 DEFB131AP59861 70 aa11.12□□□□□ -0.63
VTN-201ENST00000226218 TMEM126AQ9H061 195 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms