RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
TGFB1-201ENST00000221930 A0A1B0GX51 115 aa11.31□□□□□ -0.6
TGFB1-201ENST00000221930 NOTCH2Q04721 2471 aa11.3□□□□□ -0.6
TGFB1-201ENST00000221930 J3KT08 172 aa11.3□□□□□ -0.6
TGFB1-201ENST00000221930 HTN1P15515 57 aa11.3□□□□□ -0.6
TGFB1-201ENST00000221930 OPRPNQ99935 248 aaPredicted RBP11.3□□□□□ -0.6
TGFB1-201ENST00000221930 K7EQG2 157 aa11.3□□□□□ -0.6
TGFB1-201ENST00000221930 C9orf85Q96MD7 179 aa11.3□□□□□ -0.6
TGFB1-201ENST00000221930 PMVKQ15126 192 aa11.29□□□□□ -0.6
TGFB1-201ENST00000221930 LOC107984640A0A0U1RRK4 108 aa11.29□□□□□ -0.6
TGFB1-201ENST00000221930 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.6
TGFB1-201ENST00000221930 DEFB113Q30KQ7 82 aa11.29□□□□□ -0.6
TGFB1-201ENST00000221930 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
TGFB1-201ENST00000221930 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 C9JAW5 83 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 M0QY20 66 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 LGALS9O00182 355 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 IGHV1OR15-1A0A075B7D0 117 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
TGFB1-201ENST00000221930 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 ZNRF2Q8NHG8 242 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 DEFB136Q30KP8 78 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
TGFB1-201ENST00000221930 PRM2P04554 102 aa11.27□□□□□ -0.61
TGFB1-201ENST00000221930 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.61
TGFB1-201ENST00000221930 RPS28P62857 69 aaKnown RBP11.27□□□□□ -0.61
TGFB1-201ENST00000221930 MRPL23Q16540 153 aaKnown RBP11.26□□□□□ -0.61
TGFB1-201ENST00000221930 C18orf65Q6ZTR6 163 aa11.26□□□□□ -0.61
TGFB1-201ENST00000221930 IGHV3-73A0A0B4J1V6 119 aa11.26□□□□□ -0.61
TGFB1-201ENST00000221930 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
TGFB1-201ENST00000221930 TMEM101Q96IK0 257 aa11.26□□□□□ -0.61
TGFB1-201ENST00000221930 ODF3Q96PU9 254 aa11.26□□□□□ -0.61
TGFB1-201ENST00000221930 TIMM17AQ99595 171 aa11.26□□□□□ -0.61
TGFB1-201ENST00000221930 SPANXCQ9NY87 97 aa11.26□□□□□ -0.61
TGFB1-201ENST00000221930 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 C15orf53Q8NAA6 179 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 TMEM141Q96I45 108 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 AKAP9Q99996 3911 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 TCL1BO95988 128 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
TGFB1-201ENST00000221930 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
TGFB1-201ENST00000221930 RBMY1FQ15415 496 aaKnown RBP11.25□□□□□ -0.61
TGFB1-201ENST00000221930 TRBV6-5A0A0K0K1A5 114 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 P0DMU3 169 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 FAM231AP0DMU4 169 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 FAM231CP0DMU5 169 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 IGHV4-31P0DP07 118 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 UBE2D1P51668 147 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 HERVK_113P61574 105 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 UBR5O95071 2799 aaPredicted RBP11.24□□□□□ -0.61
TGFB1-201ENST00000221930 NDUFA7O95182 113 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 ZNF702PQ9H963 129 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 ACANP16112 2415 aa11.24□□□□□ -0.61
TGFB1-201ENST00000221930 A0A0J9YY99 117 aa11.23□□□□□ -0.61
TGFB1-201ENST00000221930 SLURP1P55000 103 aa11.23□□□□□ -0.61
TGFB1-201ENST00000221930 PAPPA-AS1Q5QFB9 102 aa11.23□□□□□ -0.61
TGFB1-201ENST00000221930 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
TGFB1-201ENST00000221930 F5H768 121 aa11.23□□□□□ -0.61
TGFB1-201ENST00000221930 M0R2P5 195 aa11.23□□□□□ -0.61
TGFB1-201ENST00000221930 PRRC2AP48634 2157 aaKnown RBP11.23□□□□□ -0.61
TGFB1-201ENST00000221930 IGHV3-64A0A075B6Q5 118 aa11.22□□□□□ -0.61
TGFB1-201ENST00000221930 PROK1P58294 105 aa11.22□□□□□ -0.61
TGFB1-201ENST00000221930 CHCHD5Q9BSY4 110 aa11.22□□□□□ -0.61
TGFB1-201ENST00000221930 WNK1Q9H4A3 2382 aa11.22□□□□□ -0.61
TGFB1-201ENST00000221930 Q6YL49 198 aa11.22□□□□□ -0.61
TGFB1-201ENST00000221930 TRPT1Q86TN4 253 aaKnown RBP11.22□□□□□ -0.61
TGFB1-201ENST00000221930 HELZ2Q9BYK8 2649 aaKnown RBP11.22□□□□□ -0.61
TGFB1-201ENST00000221930 MRAPQ8TCY5 172 aa11.22□□□□□ -0.61
TGFB1-201ENST00000221930 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
TGFB1-201ENST00000221930 ELANEP08246 267 aa11.21□□□□□ -0.61
TGFB1-201ENST00000221930 DEFB131AP59861 70 aa11.21□□□□□ -0.61
TGFB1-201ENST00000221930 APCP25054 2843 aa11.21□□□□□ -0.61
TGFB1-201ENST00000221930 MTORP42345 2549 aa11.21□□□□□ -0.62
TGFB1-201ENST00000221930 CR1P17927 2039 aa11.21□□□□□ -0.62
TGFB1-201ENST00000221930 SLC25A20O43772 301 aa11.21□□□□□ -0.62
TGFB1-201ENST00000221930 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 Q9UF83 564 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 F8WDY8 70 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 J3QQQ9 107 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 HERVK_113P63121 156 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 NSUN5P1Q3KNT7 163 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 RNF152Q8N8N0 203 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 C20orf203Q8NBC4 194 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 TENM4Q6N022 2769 aa11.2□□□□□ -0.62
TGFB1-201ENST00000221930 TRAV8-4A0A0B4J246 113 aa11.19□□□□□ -0.62
TGFB1-201ENST00000221930 I3L3M4 83 aa11.19□□□□□ -0.62
TGFB1-201ENST00000221930 KRTAP10-9P60411 292 aa11.19□□□□□ -0.62
TGFB1-201ENST00000221930 C9orf153Q5TBE3 101 aa11.19□□□□□ -0.62
TGFB1-201ENST00000221930 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
TGFB1-201ENST00000221930 AMELXQ99217 191 aa11.19□□□□□ -0.62
TGFB1-201ENST00000221930 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
TGFB1-201ENST00000221930 TRAV2A0A0B4J234 112 aa11.18□□□□□ -0.62
TGFB1-201ENST00000221930 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms