RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 MRAPQ8TCY5 172 aa11.82□□□□□ -0.52
SF3A2-201ENST00000221494 EDA2RQ9HAV5 297 aa11.82□□□□□ -0.52
SF3A2-201ENST00000221494 DAZ1Q9NQZ3 744 aaKnown RBP11.82□□□□□ -0.52
SF3A2-201ENST00000221494 F5H697 171 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 SPRY2O43597 315 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 C20orf203Q8NBC4 194 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 ZFHX3Q15911 3703 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 ITPR3Q14573 2671 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
SF3A2-201ENST00000221494 M0QY20 66 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
SF3A2-201ENST00000221494 EMP1P54849 157 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 LINC01620Q4KN68 170 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 ZNF580Q9UK33 172 aa11.81□□□□□ -0.52
SF3A2-201ENST00000221494 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
SF3A2-201ENST00000221494 TRBV10-2A0A0K0K1G8 114 aa11.8□□□□□ -0.52
SF3A2-201ENST00000221494 A6NDX4 124 aa11.8□□□□□ -0.52
SF3A2-201ENST00000221494 H3BUX3 64 aa11.8□□□□□ -0.52
SF3A2-201ENST00000221494 IGHG2P01859 326 aa11.8□□□□□ -0.52
SF3A2-201ENST00000221494 PYGO1Q9Y3Y4 419 aa11.8□□□□□ -0.52
SF3A2-201ENST00000221494 CSPG4Q6UVK1 2322 aa11.8□□□□□ -0.52
SF3A2-201ENST00000221494 TEX15Q9BXT5 2789 aa11.8□□□□□ -0.52
SF3A2-201ENST00000221494 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 F6UB75 175 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 SNCGO76070 127 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 RPL11P62913 178 aaKnown RBP11.79□□□□□ -0.52
SF3A2-201ENST00000221494 CR1P17927 2039 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 I3L3M4 83 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 DEFB112Q30KQ8 113 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 MUSTN1Q8IVN3 82 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
SF3A2-201ENST00000221494 H3BT86 120 aa11.78□□□□□ -0.52
SF3A2-201ENST00000221494 LY6EQ16553 131 aa11.78□□□□□ -0.52
SF3A2-201ENST00000221494 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
SF3A2-201ENST00000221494 SPANXDQ9BXN6 97 aa11.78□□□□□ -0.52
SF3A2-201ENST00000221494 SPANXCQ9NY87 97 aa11.78□□□□□ -0.52
SF3A2-201ENST00000221494 A0A087WWL8 130 aa11.78□□□□□ -0.52
SF3A2-201ENST00000221494 EIF4EBP3O60516 100 aaPredicted RBP11.78□□□□□ -0.52
SF3A2-201ENST00000221494 Q8N1Y9 231 aa11.78□□□□□ -0.52
SF3A2-201ENST00000221494 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.53
SF3A2-201ENST00000221494 A0A0J9YXY3 114 aa11.77□□□□□ -0.53
SF3A2-201ENST00000221494 DCANP1Q8TF63 244 aa11.77□□□□□ -0.53
SF3A2-201ENST00000221494 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
SF3A2-201ENST00000221494 FAM240AA0A1B0GVK7 77 aa11.76□□□□□ -0.53
SF3A2-201ENST00000221494 DEFB1P60022 68 aa11.76□□□□□ -0.53
SF3A2-201ENST00000221494 JPT2Q9H910 190 aa11.76□□□□□ -0.53
SF3A2-201ENST00000221494 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
SF3A2-201ENST00000221494 IGLV1-40P01703 118 aa11.76□□□□□ -0.53
SF3A2-201ENST00000221494 ZNF56Q15929 161 aa11.76□□□□□ -0.53
SF3A2-201ENST00000221494 MXRA5Q9NR99 2828 aa11.75□□□□□ -0.53
SF3A2-201ENST00000221494 TRAV8-4A0A0B4J246 113 aa11.75□□□□□ -0.53
SF3A2-201ENST00000221494 IGHV4-59P01825 116 aa11.75□□□□□ -0.53
SF3A2-201ENST00000221494 COX6CP09669 75 aa11.75□□□□□ -0.53
SF3A2-201ENST00000221494 NDUFV3P56181 108 aaKnown RBP11.75□□□□□ -0.53
SF3A2-201ENST00000221494 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
SF3A2-201ENST00000221494 Q1RN00 199 aa11.75□□□□□ -0.53
SF3A2-201ENST00000221494 NTN5Q8WTR8 489 aaPredicted RBP11.75□□□□□ -0.53
SF3A2-201ENST00000221494 H3BMM0 161 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 UBE2WQ96B02 151 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 FLNAP21333 2647 aaKnown RBP11.74□□□□□ -0.53
SF3A2-201ENST00000221494 TRAV12-3A0A0B4J271 114 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 TIMM17BO60830 172 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 SEC61GP60059 68 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 DEFB121Q5J5C9 76 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 LITAFQ99732 161 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
SF3A2-201ENST00000221494 TRGV11A0A075B6L2 103 aa11.73□□□□□ -0.53
SF3A2-201ENST00000221494 IGHV1OR15-1A0A075B7D0 117 aa11.73□□□□□ -0.53
SF3A2-201ENST00000221494 BLCAPP62952 87 aa11.73□□□□□ -0.53
SF3A2-201ENST00000221494 GAGE12JA6NER3 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 GAGE7O76087 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 NHLRC4P0CG21 123 aaPredicted RBP11.72□□□□□ -0.53
SF3A2-201ENST00000221494 GAGE12FP0CL80 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 GAGE12GP0CL81 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 GAGE12IP0CL82 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 IGHV3-30-3P0DP02 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 IFITM1P13164 125 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 KRTAP1-1Q07627 177 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 GAGE4Q13068 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 Q6YL49 198 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 F5H768 121 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 TRIAP1O43715 76 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 TTC32Q5I0X7 151 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 PIK3CD-AS1Q5SR53 167 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 FAM74A4Q5TZK3 123 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 DNAJC30Q96LL9 226 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
SF3A2-201ENST00000221494 SNRPD3P62318 126 aaKnown RBP11.71□□□□□ -0.53
SF3A2-201ENST00000221494 CFHR3Q02985 330 aa11.71□□□□□ -0.53
SF3A2-201ENST00000221494 MIAQ16674 131 aa11.71□□□□□ -0.53
SF3A2-201ENST00000221494 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
SF3A2-201ENST00000221494 NOTCH2Q04721 2471 aa11.7□□□□□ -0.54
SF3A2-201ENST00000221494 TLN2Q9Y4G6 2542 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms