RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SPINK6Q6UWN8 80 aa7.95□□□□□ -1.14
TRPS1-201ENST00000220888 MIAQ16674 131 aa7.95□□□□□ -1.14
TRPS1-201ENST00000220888 KPRPQ5T749 579 aaPredicted RBP7.95□□□□□ -1.14
TRPS1-201ENST00000220888 SMIM20Q8N5G0 67 aa7.95□□□□□ -1.14
TRPS1-201ENST00000220888 FAM167A-AS1Q96KT0 104 aa7.95□□□□□ -1.14
TRPS1-201ENST00000220888 TP53TG3Q9ULZ0 132 aa7.94□□□□□ -1.14
TRPS1-201ENST00000220888 E7EUB6 86 aa7.94□□□□□ -1.14
TRPS1-201ENST00000220888 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
TRPS1-201ENST00000220888 E9PLD3 99 aa7.93□□□□□ -1.14
TRPS1-201ENST00000220888 TANC1Q9C0D5 1861 aa7.93□□□□□ -1.14
TRPS1-201ENST00000220888 LY6LH3BQJ8 138 aa7.93□□□□□ -1.14
TRPS1-201ENST00000220888 ATOX1O00244 68 aa7.93□□□□□ -1.14
TRPS1-201ENST00000220888 CHD3Q12873 2000 aaKnown RBP7.93□□□□□ -1.14
TRPS1-201ENST00000220888 UBE2D2P62837 147 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 Q6ZSR3 168 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 XAGE1AQ9HD64 81 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 LINC00474Q9P2X8 69 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 BBC3Q96PG8 261 aaPredicted RBP7.92□□□□□ -1.14
TRPS1-201ENST00000220888 PSMG3-AS1Q96PY0 264 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 TRBV6-8A0A0A6YYG3 113 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 OXLD1Q5BKU9 147 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 PPDPFQ9H3Y8 114 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 CLEC2BQ92478 149 aa7.92□□□□□ -1.14
TRPS1-201ENST00000220888 HELZP42694 1942 aaKnown RBP7.92□□□□□ -1.14
TRPS1-201ENST00000220888 ANKRD39Q53RE8 183 aa7.91□□□□□ -1.14
TRPS1-201ENST00000220888 Q8N976 141 aa7.91□□□□□ -1.14
TRPS1-201ENST00000220888 NAV2Q8IVL1 2488 aa7.91□□□□□ -1.14
TRPS1-201ENST00000220888 LOC107984640A0A0U1RRK4 108 aa7.91□□□□□ -1.14
TRPS1-201ENST00000220888 ZNF702PQ9H963 129 aa7.9□□□□□ -1.14
TRPS1-201ENST00000220888 FSTL3O95633 263 aa7.9□□□□□ -1.14
TRPS1-201ENST00000220888 A0A0J9YWU9 116 aa7.9□□□□□ -1.14
TRPS1-201ENST00000220888 LINC00467Q9BRT7 94 aa7.9□□□□□ -1.14
TRPS1-201ENST00000220888 NANOS2P60321 138 aaKnown RBP7.89□□□□□ -1.15
TRPS1-201ENST00000220888 SIP14410 1827 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 PIEZO1Q92508 2521 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 C10orf99Q6UWK7 81 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 HRCT1Q6UXD1 115 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 IGLV4-69A0A075B6H9 119 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 FOXI1Q12951 378 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 HIST2H2BDQ6DRA6 164 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 LINC00173Q6ZV60 143 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 NEXN-AS1Q8NBZ9 246 aa7.89□□□□□ -1.15
TRPS1-201ENST00000220888 KMT2EQ8IZD2 1858 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 TCL1BO95988 128 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 LELP1Q5T871 98 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 H3BT86 120 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 C11orf71Q6IPW1 123 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 ABCA2Q9BZC7 2435 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 RLFQ13129 1914 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 IGKV2-28A0A075B6P5 120 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 IGKV2D-28P01615 120 aa7.88□□□□□ -1.15
TRPS1-201ENST00000220888 PLAC8L1A1L4L8 177 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 IBA57-AS1B1ANH7 110 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 CFAP126Q5VTH2 177 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 C3orf22Q8N5N4 141 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 SPANXB1Q9NS25 103 aaPredicted RBP7.87□□□□□ -1.15
TRPS1-201ENST00000220888 SPATA12Q7Z6I5 190 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 IGHV4-30-4P0DP06 118 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 PLXNA2O75051 1894 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 NDUFC2O95298 119 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 CRYGBP07316 175 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 SVIPQ8NHG7 77 aa7.87□□□□□ -1.15
TRPS1-201ENST00000220888 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 FAM236AA0A1B0GUQ0 79 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 FAM236BA0A1B0GV22 79 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 RBX1P62877 108 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 CLUHP3Q96NS8 147 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 NUP210Q8TEM1 1887 aaPredicted RBP7.86□□□□□ -1.15
TRPS1-201ENST00000220888 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 TTTY13Q9BZ97 58 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 HIGD1BQ9P298 99 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 NDUFA7O95182 113 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 SMR3AQ99954 134 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 NOTCH4Q99466 2003 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 NAV3Q8IVL0 2385 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 EBI3Q14213 229 aa7.86□□□□□ -1.15
TRPS1-201ENST00000220888 C1orf158Q8N1D5 194 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 DHRS4-AS1Q9P1J3 65 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 C10orf91Q5T1B1 145 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 LINC00574Q9H8X3 128 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 WFDC10AQ9H1F0 79 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 IGLV5-52A0A0A0MRZ9 124 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 ZNF80P51504 273 aaPredicted RBP7.85□□□□□ -1.15
TRPS1-201ENST00000220888 CD164L2Q6UWJ8 174 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 C20orf173Q96LM9 149 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 PRO3102Q9H379 93 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 U3KQK5 164 aa7.85□□□□□ -1.15
TRPS1-201ENST00000220888 TRAV23DV6A0A075B6W5 121 aa7.84□□□□□ -1.15
TRPS1-201ENST00000220888 FXYD2P54710 66 aa7.84□□□□□ -1.15
TRPS1-201ENST00000220888 A0A0J9YXY3 114 aa7.84□□□□□ -1.15
TRPS1-201ENST00000220888 C19orf71A6NCJ1 209 aa7.84□□□□□ -1.15
TRPS1-201ENST00000220888 DCANP1Q8TF63 244 aa7.84□□□□□ -1.15
TRPS1-201ENST00000220888 M0R378 163 aa7.84□□□□□ -1.15
TRPS1-201ENST00000220888 RPL28P46779 137 aaKnown RBP7.84□□□□□ -1.15
TRPS1-201ENST00000220888 LYPD6Q86Y78 171 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms