RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RRN3P1Q2M238 152 aa21.3■■□□□ 1
PABPN1-201ENST00000216727 OR11H2Q8NH07 326 aa21.3■■□□□ 1
PABPN1-201ENST00000216727 ZNF479Q96JC4 524 aa21.3■■□□□ 1
PABPN1-201ENST00000216727 COX11Q9Y6N1 276 aa21.29■■□□□ 1
PABPN1-201ENST00000216727 MAPKAPK5-AS1Q8N8E1 139 aa21.29■■□□□ 1
PABPN1-201ENST00000216727 OVOL2Q9BRP0 275 aa21.29■■□□□ 1
PABPN1-201ENST00000216727 NPSP0C0P6 89 aa21.28■■□□□ 1
PABPN1-201ENST00000216727 NOTCH3Q9UM47 2321 aa21.28■■□□□ 1
PABPN1-201ENST00000216727 IGLV4-3A0A075B6K6 122 aa21.28■■□□□ 1
PABPN1-201ENST00000216727 ORAOV1Q8WV07 137 aa21.28■■□□□ 1
PABPN1-201ENST00000216727 OPRPNQ99935 248 aaPredicted RBP21.28■■□□□ 1
PABPN1-201ENST00000216727 CHCHD7Q9BUK0 85 aa21.28■■□□□ 1
PABPN1-201ENST00000216727 TRBV10-1A0A0K0K1A3 114 aa21.27■■□□□ 1
PABPN1-201ENST00000216727 GAGE1Q13065 139 aa21.27■■□□□ 1
PABPN1-201ENST00000216727 CRYBA4P53673 196 aa21.26■□□□□ 0.99
PABPN1-201ENST00000216727 SPATA3Q8NHX4 192 aa21.26■□□□□ 0.99
PABPN1-201ENST00000216727 CHAC1Q9BUX1 264 aa21.26■□□□□ 0.99
PABPN1-201ENST00000216727 NFE4Q86UQ8 179 aa21.26■□□□□ 0.99
PABPN1-201ENST00000216727 COTL1Q14019 142 aa21.25■□□□□ 0.99
PABPN1-201ENST00000216727 ZNRF2Q8NHG8 242 aa21.25■□□□□ 0.99
PABPN1-201ENST00000216727 PRADC1Q9BSG0 188 aa21.25■□□□□ 0.99
PABPN1-201ENST00000216727 TAX1BP3O14907 124 aa21.24■□□□□ 0.99
PABPN1-201ENST00000216727 EMP1P54849 157 aa21.24■□□□□ 0.99
PABPN1-201ENST00000216727 VCX2Q9H322 139 aa21.24■□□□□ 0.99
PABPN1-201ENST00000216727 TRBV7-3A0A075B6L6 115 aa21.24■□□□□ 0.99
PABPN1-201ENST00000216727 K7EQD1 137 aa21.24■□□□□ 0.99
PABPN1-201ENST00000216727 CIDEAO60543 219 aa21.24■□□□□ 0.99
PABPN1-201ENST00000216727 HERVK_113P61574 105 aa21.23■□□□□ 0.99
PABPN1-201ENST00000216727 MYMXA0A1B0GTQ4 84 aa21.22■□□□□ 0.99
PABPN1-201ENST00000216727 Q6ZVH6 145 aa21.22■□□□□ 0.99
PABPN1-201ENST00000216727 SPANXA1Q9NS26 97 aa21.22■□□□□ 0.99
PABPN1-201ENST00000216727 VWFP04275 2813 aa21.22■□□□□ 0.99
PABPN1-201ENST00000216727 FAM104AQ969W3 186 aa21.22■□□□□ 0.99
PABPN1-201ENST00000216727 AMELXQ99217 191 aa21.22■□□□□ 0.99
PABPN1-201ENST00000216727 TENM1Q9UKZ4 2725 aa21.22■□□□□ 0.99
PABPN1-201ENST00000216727 PHLDA1Q8WV24 401 aaPredicted RBP21.21■□□□□ 0.99
PABPN1-201ENST00000216727 IGHV3-38A0A0C4DH36 116 aa21.21■□□□□ 0.99
PABPN1-201ENST00000216727 A6NDN8 102 aa21.21■□□□□ 0.99
PABPN1-201ENST00000216727 RPL36AP83881 106 aaKnown RBP21.2■□□□□ 0.98
PABPN1-201ENST00000216727 RPL36ALQ969Q0 106 aaKnown RBP21.2■□□□□ 0.98
PABPN1-201ENST00000216727 SLC25A29Q8N8R3 303 aa21.19■□□□□ 0.98
PABPN1-201ENST00000216727 UBE2D4Q9Y2X8 147 aa21.19■□□□□ 0.98
PABPN1-201ENST00000216727 TRGV2A0A075B6R0 118 aa21.18■□□□□ 0.98
PABPN1-201ENST00000216727 GAGE12BA1L429 117 aa21.18■□□□□ 0.98
PABPN1-201ENST00000216727 GAGE7O76087 117 aa21.18■□□□□ 0.98
PABPN1-201ENST00000216727 GAGE12FP0CL80 117 aa21.18■□□□□ 0.98
PABPN1-201ENST00000216727 GAGE12GP0CL81 117 aa21.18■□□□□ 0.98
PABPN1-201ENST00000216727 GAGE12IP0CL82 117 aa21.18■□□□□ 0.98
PABPN1-201ENST00000216727 TMEM170BQ5T4T1 132 aa21.18■□□□□ 0.98
PABPN1-201ENST00000216727 TAL2Q16559 108 aa21.17■□□□□ 0.98
PABPN1-201ENST00000216727 DAZ4Q86SG3 579 aaKnown RBP21.17■□□□□ 0.98
PABPN1-201ENST00000216727 DAZ3Q9NR90 486 aaKnown RBP21.17■□□□□ 0.98
PABPN1-201ENST00000216727 WFDC9Q8NEX5 89 aa21.16■□□□□ 0.98
PABPN1-201ENST00000216727 TEP1Q99973 2627 aaKnown RBP21.15■□□□□ 0.98
PABPN1-201ENST00000216727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP21.15■□□□□ 0.98
PABPN1-201ENST00000216727 IGKV2-29A2NJV5 120 aaPredicted RBP21.15■□□□□ 0.98
PABPN1-201ENST00000216727 CEMP1Q6PRD7 247 aaPredicted RBP21.15■□□□□ 0.98
PABPN1-201ENST00000216727 TM2D2Q9BX73 214 aa21.15■□□□□ 0.98
PABPN1-201ENST00000216727 ATRQ13535 2644 aa21.15■□□□□ 0.98
PABPN1-201ENST00000216727 UBE2D3P61077 147 aa21.14■□□□□ 0.98
PABPN1-201ENST00000216727 UBE2D2P62837 147 aa21.14■□□□□ 0.98
PABPN1-201ENST00000216727 F8P00451 2351 aa21.14■□□□□ 0.97
PABPN1-201ENST00000216727 TRBV6-4A0A1B0GX49 114 aa21.13■□□□□ 0.97
PABPN1-201ENST00000216727 TIMM21Q9BVV7 248 aa21.13■□□□□ 0.97
PABPN1-201ENST00000216727 ZNF815PA8K554 130 aa21.12■□□□□ 0.97
PABPN1-201ENST00000216727 GCSHP23434 173 aa21.12■□□□□ 0.97
PABPN1-201ENST00000216727 FLNBO75369 2602 aaKnown RBP21.12■□□□□ 0.97
PABPN1-201ENST00000216727 A0A0J9YXV3 536 aa21.12■□□□□ 0.97
PABPN1-201ENST00000216727 H3BRM9 83 aa21.12■□□□□ 0.97
PABPN1-201ENST00000216727 MRPS36P82909 103 aaKnown RBP21.12■□□□□ 0.97
PABPN1-201ENST00000216727 CEND1Q8N111 149 aa21.12■□□□□ 0.97
PABPN1-201ENST00000216727 ZNF22P17026 224 aaPredicted RBP21.11■□□□□ 0.97
PABPN1-201ENST00000216727 TMEM223A0PJW6 202 aa21.11■□□□□ 0.97
PABPN1-201ENST00000216727 SMIM9A6NGZ8 99 aa21.11■□□□□ 0.97
PABPN1-201ENST00000216727 FXYD2P54710 66 aa21.1■□□□□ 0.97
PABPN1-201ENST00000216727 KIR2DL5BQ8NHK3 375 aa21.1■□□□□ 0.97
PABPN1-201ENST00000216727 WIPF1O43516 503 aa21.09■□□□□ 0.97
PABPN1-201ENST00000216727 X6R8D5 127 aa21.09■□□□□ 0.97
PABPN1-201ENST00000216727 GAGE12JA6NER3 117 aa21.08■□□□□ 0.97
PABPN1-201ENST00000216727 GAGE4Q13068 117 aa21.08■□□□□ 0.97
PABPN1-201ENST00000216727 GAGE5Q13069 117 aa21.08■□□□□ 0.97
PABPN1-201ENST00000216727 GAGE13Q4V321 117 aa21.08■□□□□ 0.97
PABPN1-201ENST00000216727 LINC00612Q8N6U2 182 aa21.08■□□□□ 0.97
PABPN1-201ENST00000216727 Q6ZUT4 128 aa21.07■□□□□ 0.96
PABPN1-201ENST00000216727 TRGV4A0A0C4DH28 118 aa21.06■□□□□ 0.96
PABPN1-201ENST00000216727 HIST1H4GQ99525 98 aa21.06■□□□□ 0.96
PABPN1-201ENST00000216727 TSPEAR-AS2P59090 65 aa21.05■□□□□ 0.96
PABPN1-201ENST00000216727 FHL2Q14192 279 aa21.05■□□□□ 0.96
PABPN1-201ENST00000216727 NTM-AS1Q6ZSK4 140 aa21.05■□□□□ 0.96
PABPN1-201ENST00000216727 GTSF1LQ9H1H1 148 aa21.05■□□□□ 0.96
PABPN1-201ENST00000216727 J3QQQ9 107 aa21.05■□□□□ 0.96
PABPN1-201ENST00000216727 LEPROTO15243 131 aa21.05■□□□□ 0.96
PABPN1-201ENST00000216727 UBE2V1Q13404 147 aa21.05■□□□□ 0.96
PABPN1-201ENST00000216727 RNASE13Q5GAN3 156 aaKnown RBP21.04■□□□□ 0.96
PABPN1-201ENST00000216727 SCGB1D4Q6XE38 83 aa21.04■□□□□ 0.96
PABPN1-201ENST00000216727 TINCRA0A1B0GVN0 87 aa21.04■□□□□ 0.96
PABPN1-201ENST00000216727 K7EP13 123 aa21.04■□□□□ 0.96
PABPN1-201ENST00000216727 PTTG1IPP53801 180 aa21.04■□□□□ 0.96
PABPN1-201ENST00000216727 VAMP3Q15836 100 aa21.04■□□□□ 0.96
PABPN1-201ENST00000216727 CSDC2Q9Y534 153 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms