RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 APOC4P55056 127 aa12.46□□□□□ -0.41
VRK1-201ENST00000216639 PCP2Q8IVA1 136 aa12.46□□□□□ -0.41
VRK1-201ENST00000216639 KIR2DL5BQ8NHK3 375 aa12.46□□□□□ -0.41
VRK1-201ENST00000216639 PYGO1Q9Y3Y4 419 aa12.46□□□□□ -0.41
VRK1-201ENST00000216639 WIPF1O43516 503 aa12.45□□□□□ -0.42
VRK1-201ENST00000216639 C2orf91Q6ZV80 131 aa12.45□□□□□ -0.42
VRK1-201ENST00000216639 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
VRK1-201ENST00000216639 Q9UF83 564 aa12.45□□□□□ -0.42
VRK1-201ENST00000216639 IGKV2D-26A0A0A0MRZ7 120 aa12.45□□□□□ -0.42
VRK1-201ENST00000216639 NPSP0C0P6 89 aa12.45□□□□□ -0.42
VRK1-201ENST00000216639 MPV17L2Q567V2 206 aa12.45□□□□□ -0.42
VRK1-201ENST00000216639 PHLDA1Q8WV24 401 aaPredicted RBP12.44□□□□□ -0.42
VRK1-201ENST00000216639 VCX2Q9H322 139 aa12.44□□□□□ -0.42
VRK1-201ENST00000216639 CRYBA4P53673 196 aa12.43□□□□□ -0.42
VRK1-201ENST00000216639 KRTAP24-1Q3LI83 254 aa12.43□□□□□ -0.42
VRK1-201ENST00000216639 DAZ4Q86SG3 579 aaKnown RBP12.43□□□□□ -0.42
VRK1-201ENST00000216639 SLC25A29Q8N8R3 303 aa12.43□□□□□ -0.42
VRK1-201ENST00000216639 CHCHD7Q9BUK0 85 aa12.43□□□□□ -0.42
VRK1-201ENST00000216639 DAZ3Q9NR90 486 aaKnown RBP12.43□□□□□ -0.42
VRK1-201ENST00000216639 SPANXA1Q9NS26 97 aa12.43□□□□□ -0.42
VRK1-201ENST00000216639 MAST4O15021 2626 aa12.43□□□□□ -0.42
VRK1-201ENST00000216639 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
VRK1-201ENST00000216639 IGHV3-38A0A0C4DH36 116 aa12.42□□□□□ -0.42
VRK1-201ENST00000216639 HERVK_113P61574 105 aa12.42□□□□□ -0.42
VRK1-201ENST00000216639 IGLV4-3A0A075B6K6 122 aa12.42□□□□□ -0.42
VRK1-201ENST00000216639 TRGV4A0A0C4DH28 118 aa12.42□□□□□ -0.42
VRK1-201ENST00000216639 EMP1P54849 157 aa12.42□□□□□ -0.42
VRK1-201ENST00000216639 OR11H2Q8NH07 326 aa12.42□□□□□ -0.42
VRK1-201ENST00000216639 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
VRK1-201ENST00000216639 E9PLD3 99 aa12.41□□□□□ -0.42
VRK1-201ENST00000216639 BVES-AS1Q5T3Y7 98 aa12.41□□□□□ -0.42
VRK1-201ENST00000216639 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
VRK1-201ENST00000216639 OPRPNQ99935 248 aaPredicted RBP12.41□□□□□ -0.42
VRK1-201ENST00000216639 TRAV8-6A0A0B4J262 113 aa12.4□□□□□ -0.42
VRK1-201ENST00000216639 C11orf86A6NJI1 115 aa12.4□□□□□ -0.42
VRK1-201ENST00000216639 HIGD1BQ9P298 99 aa12.4□□□□□ -0.42
VRK1-201ENST00000216639 X6R8D5 127 aa12.4□□□□□ -0.42
VRK1-201ENST00000216639 HSD52Q0P140 79 aa12.4□□□□□ -0.43
VRK1-201ENST00000216639 LURAP1LQ8IV03 231 aa12.4□□□□□ -0.43
VRK1-201ENST00000216639 ZMAT5Q9UDW3 170 aaKnown RBP12.4□□□□□ -0.43
VRK1-201ENST00000216639 F8P00451 2351 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 GAGE12JA6NER3 117 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 UBE2D3P61077 147 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 UBE2D2P62837 147 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 GAGE1Q13065 139 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 GAGE4Q13068 117 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 GAGE5Q13069 117 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 GAGE13Q4V321 117 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 SHISA2Q6UWI4 295 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 NFE4Q86UQ8 179 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 UBE2D4Q9Y2X8 147 aa12.39□□□□□ -0.43
VRK1-201ENST00000216639 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
VRK1-201ENST00000216639 AMELXQ99217 191 aa12.38□□□□□ -0.43
VRK1-201ENST00000216639 PRADC1Q9BSG0 188 aa12.38□□□□□ -0.43
VRK1-201ENST00000216639 TTTY13Q9BZ97 58 aa12.38□□□□□ -0.43
VRK1-201ENST00000216639 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.37□□□□□ -0.43
VRK1-201ENST00000216639 IGKV2-29A2NJV5 120 aaPredicted RBP12.37□□□□□ -0.43
VRK1-201ENST00000216639 SMAGPQ0VAQ4 97 aa12.37□□□□□ -0.43
VRK1-201ENST00000216639 LINC00612Q8N6U2 182 aa12.37□□□□□ -0.43
VRK1-201ENST00000216639 CHAC1Q9BUX1 264 aa12.37□□□□□ -0.43
VRK1-201ENST00000216639 TRBV25-1A0A075B6N4 114 aa12.37□□□□□ -0.43
VRK1-201ENST00000216639 DEFB130BP0DP73 79 aa12.37□□□□□ -0.43
VRK1-201ENST00000216639 DEFB130AP0DP74 79 aa12.37□□□□□ -0.43
VRK1-201ENST00000216639 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
VRK1-201ENST00000216639 SEC11AP67812 179 aa12.36□□□□□ -0.43
VRK1-201ENST00000216639 FHL2Q14192 279 aa12.36□□□□□ -0.43
VRK1-201ENST00000216639 DEFB135Q30KP9 77 aa12.36□□□□□ -0.43
VRK1-201ENST00000216639 DGAT2L7PQ6IED9 249 aa12.36□□□□□ -0.43
VRK1-201ENST00000216639 MYMXA0A1B0GTQ4 84 aa12.35□□□□□ -0.43
VRK1-201ENST00000216639 LYRM9A8MSI8 78 aa12.35□□□□□ -0.43
VRK1-201ENST00000216639 CEMP1Q6PRD7 247 aaPredicted RBP12.35□□□□□ -0.43
VRK1-201ENST00000216639 MAPKAPK5-AS1Q8N8E1 139 aa12.35□□□□□ -0.43
VRK1-201ENST00000216639 GTSF1LQ9H1H1 148 aa12.35□□□□□ -0.43
VRK1-201ENST00000216639 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
VRK1-201ENST00000216639 MRPS36P82909 103 aaKnown RBP12.34□□□□□ -0.43
VRK1-201ENST00000216639 ORAOV1Q8WV07 137 aa12.34□□□□□ -0.43
VRK1-201ENST00000216639 A0A0J9YXV3 536 aa12.33□□□□□ -0.44
VRK1-201ENST00000216639 ZNF25P17030 456 aaPredicted RBP12.33□□□□□ -0.44
VRK1-201ENST00000216639 JMJD1CQ15652 2540 aa12.33□□□□□ -0.44
VRK1-201ENST00000216639 A6NDN8 102 aa12.32□□□□□ -0.44
VRK1-201ENST00000216639 MIFP14174 115 aa12.32□□□□□ -0.44
VRK1-201ENST00000216639 FAM104AQ969W3 186 aa12.32□□□□□ -0.44
VRK1-201ENST00000216639 FAM222AQ5U5X8 452 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 NIPBLQ6KC79 2804 aaeCLIP12.31□□□□□ -0.44
VRK1-201ENST00000216639 TMEM223A0PJW6 202 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 UBE2L6O14933 153 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 ZNF22P17026 224 aaPredicted RBP12.31□□□□□ -0.44
VRK1-201ENST00000216639 TAL2Q16559 108 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 NTM-AS1Q6ZSK4 140 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 Q6ZUT4 128 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 TMEM243Q9BU79 118 aa12.31□□□□□ -0.44
VRK1-201ENST00000216639 CSDC2Q9Y534 153 aaKnown RBP12.31□□□□□ -0.44
VRK1-201ENST00000216639 LOC100131303A0A0U1RQF7 123 aa12.3□□□□□ -0.44
VRK1-201ENST00000216639 H7C423 109 aa12.3□□□□□ -0.44
VRK1-201ENST00000216639 OXLD1Q5BKU9 147 aa12.3□□□□□ -0.44
VRK1-201ENST00000216639 IGHV4-28A0A0C4DH34 117 aa12.29□□□□□ -0.44
VRK1-201ENST00000216639 TINCRA0A1B0GVN0 87 aa12.29□□□□□ -0.44
VRK1-201ENST00000216639 RNASE13Q5GAN3 156 aaKnown RBP12.29□□□□□ -0.44
VRK1-201ENST00000216639 RNF183Q96D59 192 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms