RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LINC00574Q9H8X3 128 aa10.32□□□□□ -0.76
SIX4-201ENST00000216513 C9orf118A6NHY6 69 aa10.32□□□□□ -0.76
SIX4-201ENST00000216513 SLC25A29Q8N8R3 303 aa10.32□□□□□ -0.76
SIX4-201ENST00000216513 SPAG11BQ08648 103 aa10.31□□□□□ -0.76
SIX4-201ENST00000216513 PRO1854Q9UHT4 67 aa10.31□□□□□ -0.76
SIX4-201ENST00000216513 SORL1Q92673 2214 aa10.31□□□□□ -0.76
SIX4-201ENST00000216513 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
SIX4-201ENST00000216513 IL15RAQ13261 267 aa10.31□□□□□ -0.76
SIX4-201ENST00000216513 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
SIX4-201ENST00000216513 COX8AP10176 69 aa10.3□□□□□ -0.76
SIX4-201ENST00000216513 ARHGAP32A7KAX9 2087 aa10.3□□□□□ -0.76
SIX4-201ENST00000216513 KPRPQ5T749 579 aaPredicted RBP10.3□□□□□ -0.76
SIX4-201ENST00000216513 LGALS9BQ3B8N2 356 aa10.29□□□□□ -0.76
SIX4-201ENST00000216513 LGALS9CQ6DKI2 356 aa10.29□□□□□ -0.76
SIX4-201ENST00000216513 SPANXA1Q9NS26 97 aa10.29□□□□□ -0.76
SIX4-201ENST00000216513 GDF5OSQ5U4N7 250 aa10.29□□□□□ -0.76
SIX4-201ENST00000216513 C20orf173Q96LM9 149 aa10.28□□□□□ -0.76
SIX4-201ENST00000216513 A0A087WZ39 114 aa10.28□□□□□ -0.76
SIX4-201ENST00000216513 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
SIX4-201ENST00000216513 C7orf33Q8WU49 177 aa10.28□□□□□ -0.76
SIX4-201ENST00000216513 INAFM2P0DMQ5 153 aa10.28□□□□□ -0.76
SIX4-201ENST00000216513 ANKRD39Q53RE8 183 aa10.28□□□□□ -0.76
SIX4-201ENST00000216513 LRRK2Q5S007 2527 aa10.28□□□□□ -0.76
SIX4-201ENST00000216513 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
SIX4-201ENST00000216513 CRYBA4P53673 196 aa10.27□□□□□ -0.77
SIX4-201ENST00000216513 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.77
SIX4-201ENST00000216513 TRBV20-1A0A075B6N2 111 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 REG3AQ06141 175 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 C16orf95Q9H693 158 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 KIR2DL5BA0A0G2JN68 375 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 KIR2DL5BA0A0G2JPC4 375 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 C12orf74Q32Q52 190 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 KRTAP24-1Q3LI83 254 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 KIR2DL5AQ8N109 375 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 NTN5Q8WTR8 489 aaPredicted RBP10.26□□□□□ -0.77
SIX4-201ENST00000216513 FAM167A-AS1Q96KT0 104 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 RAI1Q7Z5J4 1906 aaPredicted RBP10.26□□□□□ -0.77
SIX4-201ENST00000216513 A0A1W2PPM0 123 aa10.26□□□□□ -0.77
SIX4-201ENST00000216513 LINC00322Q6ZN03 302 aaPredicted RBP10.26□□□□□ -0.77
SIX4-201ENST00000216513 ZNF80P51504 273 aaPredicted RBP10.25□□□□□ -0.77
SIX4-201ENST00000216513 PPDPFLQ8WWR9 84 aa10.25□□□□□ -0.77
SIX4-201ENST00000216513 K7EP13 123 aa10.25□□□□□ -0.77
SIX4-201ENST00000216513 CRYGBP07316 175 aa10.25□□□□□ -0.77
SIX4-201ENST00000216513 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
SIX4-201ENST00000216513 LYPD6Q86Y78 171 aa10.24□□□□□ -0.77
SIX4-201ENST00000216513 COX7B2Q8TF08 81 aa10.24□□□□□ -0.77
SIX4-201ENST00000216513 IGLV1-40P01703 118 aa10.24□□□□□ -0.77
SIX4-201ENST00000216513 TRACP01848 142 aa10.24□□□□□ -0.77
SIX4-201ENST00000216513 PROK1P58294 105 aa10.24□□□□□ -0.77
SIX4-201ENST00000216513 ZFP2Q6ZN57 461 aa10.24□□□□□ -0.77
SIX4-201ENST00000216513 K7EP34 96 aa10.23□□□□□ -0.77
SIX4-201ENST00000216513 BAALC-AS2P0C853 105 aa10.23□□□□□ -0.77
SIX4-201ENST00000216513 CLEC2BQ92478 149 aa10.23□□□□□ -0.77
SIX4-201ENST00000216513 CLUHP3Q96NS8 147 aa10.23□□□□□ -0.77
SIX4-201ENST00000216513 Q8N6K4 173 aa10.23□□□□□ -0.77
SIX4-201ENST00000216513 C11orf52Q96A22 123 aa10.23□□□□□ -0.77
SIX4-201ENST00000216513 TRBV6-1A0A0K0K1D8 114 aa10.23□□□□□ -0.77
SIX4-201ENST00000216513 A0A096LNI7 61 aa10.22□□□□□ -0.77
SIX4-201ENST00000216513 BRWD1-AS2P59051 145 aa10.22□□□□□ -0.77
SIX4-201ENST00000216513 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
SIX4-201ENST00000216513 UBE2D1P51668 147 aa10.22□□□□□ -0.77
SIX4-201ENST00000216513 B9D2Q9BPU9 175 aa10.22□□□□□ -0.77
SIX4-201ENST00000216513 IGKV3D-7A0A0C4DH55 119 aa10.21□□□□□ -0.77
SIX4-201ENST00000216513 EDN2P20800 178 aa10.21□□□□□ -0.77
SIX4-201ENST00000216513 F8W1H4 67 aa10.21□□□□□ -0.78
SIX4-201ENST00000216513 ADAMTS20P59510 1910 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 IFITM1P13164 125 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 ZFAND3Q9H8U3 227 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 NHLRC4P0CG21 123 aaPredicted RBP10.2□□□□□ -0.78
SIX4-201ENST00000216513 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 CFC1P0CG37 223 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 ANKRD29Q8N6D5 301 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 BAALCQ8WXS3 180 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 TRBV10-1A0A0K0K1A3 114 aa10.2□□□□□ -0.78
SIX4-201ENST00000216513 FXYD2P54710 66 aa10.19□□□□□ -0.78
SIX4-201ENST00000216513 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
SIX4-201ENST00000216513 LINC00526Q96FQ7 95 aa10.19□□□□□ -0.78
SIX4-201ENST00000216513 ORMDL1Q9P0S3 153 aa10.19□□□□□ -0.78
SIX4-201ENST00000216513 HIGD2AQ9BW72 106 aa10.19□□□□□ -0.78
SIX4-201ENST00000216513 CHCHD10Q8WYQ3 142 aaPredicted RBP10.18□□□□□ -0.78
SIX4-201ENST00000216513 FAM19A5Q7Z5A7 132 aaPredicted RBP10.18□□□□□ -0.78
SIX4-201ENST00000216513 CRIP3Q6Q6R5 217 aa10.18□□□□□ -0.78
SIX4-201ENST00000216513 SND1-IT1Q9HBX3 110 aa10.18□□□□□ -0.78
SIX4-201ENST00000216513 A4D1N5 150 aa10.18□□□□□ -0.78
SIX4-201ENST00000216513 ABCA12Q86UK0 2595 aa10.17□□□□□ -0.78
SIX4-201ENST00000216513 ODF3Q96PU9 254 aa10.17□□□□□ -0.78
SIX4-201ENST00000216513 EML5Q05BV3 1969 aa10.17□□□□□ -0.78
SIX4-201ENST00000216513 CEP350Q5VT06 3117 aa10.17□□□□□ -0.78
SIX4-201ENST00000216513 HERV-K104P63124 156 aa10.17□□□□□ -0.78
SIX4-201ENST00000216513 PTH2Q96A98 100 aa10.17□□□□□ -0.78
SIX4-201ENST00000216513 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
SIX4-201ENST00000216513 RBM3P98179 157 aaKnown RBP10.16□□□□□ -0.78
SIX4-201ENST00000216513 MRPL52Q86TS9 123 aaKnown RBP10.16□□□□□ -0.78
SIX4-201ENST00000216513 C9orf85Q96MD7 179 aa10.16□□□□□ -0.78
SIX4-201ENST00000216513 A8MZ25 164 aa10.16□□□□□ -0.78
SIX4-201ENST00000216513 MED14OSP0DP75 135 aa10.16□□□□□ -0.78
SIX4-201ENST00000216513 Q6ZUT4 128 aa10.16□□□□□ -0.78
SIX4-201ENST00000216513 CITED1Q99966 193 aa10.16□□□□□ -0.78
SIX4-201ENST00000216513 Q6ZTC4 211 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms