RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 GAGE12GP0CL81 117 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 GAGE12IP0CL82 117 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 GAGE4Q13068 117 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 C10orf99Q6UWK7 81 aa8.39□□□□□ -1.07
ACTN1-201ENST00000193403 BBC3Q96PG8 261 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-201ENST00000193403 RS1O15537 224 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 TSHBP01222 138 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV4-59P01825 116 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 XCL2Q9UBD3 114 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 C19orf84I3L1E1 186 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV1-69P01742 117 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 UBE2D3P61077 147 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 UBE2D2P62837 147 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 GPHB5Q86YW7 130 aa8.38□□□□□ -1.07
ACTN1-201ENST00000193403 I3L3M4 83 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 LEPROTO15243 131 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV4-4A0A075B6R2 117 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 RHODO00212 210 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 EBI3Q14213 229 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 CCDC179H3BU77 68 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 CRLF1O75462 422 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 PROK1P58294 105 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 OR13C6PQ8NH95 151 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 TIMM17AQ99595 171 aa8.37□□□□□ -1.07
ACTN1-201ENST00000193403 TRIAP1O43715 76 aa8.36□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
ACTN1-201ENST00000193403 ZNF22P17026 224 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-201ENST00000193403 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
ACTN1-201ENST00000193403 CELSR2Q9HCU4 2923 aa8.36□□□□□ -1.07
ACTN1-201ENST00000193403 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
ACTN1-201ENST00000193403 RNF223E7ERA6 249 aa8.36□□□□□ -1.07
ACTN1-201ENST00000193403 COX6B1P14854 86 aa8.36□□□□□ -1.07
ACTN1-201ENST00000193403 CIRBPQ14011 172 aaKnown RBP8.36□□□□□ -1.07
ACTN1-201ENST00000193403 IGHV4-30-2A0A087WSY4 118 aa8.36□□□□□ -1.07
ACTN1-201ENST00000193403 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 ELANEP08246 267 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 NDUFV3P56181 108 aaKnown RBP8.35□□□□□ -1.07
ACTN1-201ENST00000193403 C19orf54Q5BKX5 351 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 USMG5Q96IX5 58 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 ICOSQ9Y6W8 199 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 TRGV1A0A0A0MS02 117 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 A0A1W2PPR1 153 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 POLR2KP53803 58 aaKnown RBP8.35□□□□□ -1.07
ACTN1-201ENST00000193403 MUC4Q99102 2169 aa8.35□□□□□ -1.07
ACTN1-201ENST00000193403 LINC01619G3V211 115 aa8.34□□□□□ -1.07
ACTN1-201ENST00000193403 C20orf203Q8NBC4 194 aa8.34□□□□□ -1.07
ACTN1-201ENST00000193403 TRGV2A0A075B6R0 118 aa8.34□□□□□ -1.08
ACTN1-201ENST00000193403 UBE2L6O14933 153 aa8.34□□□□□ -1.08
ACTN1-201ENST00000193403 APRG1Q8IVJ8 170 aa8.34□□□□□ -1.08
ACTN1-201ENST00000193403 PRORYQ9H606 182 aa8.34□□□□□ -1.08
ACTN1-201ENST00000193403 MSMBP08118 114 aa8.33□□□□□ -1.08
ACTN1-201ENST00000193403 BSNQ9UPA5 3926 aa8.33□□□□□ -1.08
ACTN1-201ENST00000193403 TMEM223A0PJW6 202 aa8.33□□□□□ -1.08
ACTN1-201ENST00000193403 RPL35AP18077 110 aaKnown RBP8.33□□□□□ -1.08
ACTN1-201ENST00000193403 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 DEFB112Q30KQ8 113 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 U3KQE9 123 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 LMO4P61968 165 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 TRGV11A0A075B6L2 103 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 M0QY20 66 aa8.32□□□□□ -1.08
ACTN1-201ENST00000193403 TMEM263Q8WUH6 116 aaKnown RBP8.32□□□□□ -1.08
ACTN1-201ENST00000193403 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
ACTN1-201ENST00000193403 RHOHQ15669 191 aa8.31□□□□□ -1.08
ACTN1-201ENST00000193403 HOXD3P31249 432 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-201ENST00000193403 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
ACTN1-201ENST00000193403 HERV-K104P63124 156 aa8.31□□□□□ -1.08
ACTN1-201ENST00000193403 B4DSR2 109 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 MED14OSP0DP75 135 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 SLURP1P55000 103 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 C11orf71Q6IPW1 123 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 GAGE2AQ6NT46 116 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 Q9H8V8 135 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 CSMD2Q7Z408 3487 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 FAM236AA0A1B0GUQ0 79 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 FAM236BA0A1B0GV22 79 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 HTN3P15516 51 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
ACTN1-201ENST00000193403 GCN1Q92616 2671 aaKnown RBP8.29□□□□□ -1.08
ACTN1-201ENST00000193403 CELSR1Q9NYQ6 3014 aa8.29□□□□□ -1.08
ACTN1-201ENST00000193403 A0A0B4J2C4 111 aa8.29□□□□□ -1.08
ACTN1-201ENST00000193403 STHQ8IWL8 128 aa8.29□□□□□ -1.08
ACTN1-201ENST00000193403 CUBNO60494 3623 aa8.29□□□□□ -1.08
ACTN1-201ENST00000193403 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
ACTN1-201ENST00000193403 A0A087WW49 117 aa8.29□□□□□ -1.08
ACTN1-201ENST00000193403 ITPR2Q14571 2701 aa8.29□□□□□ -1.08
ACTN1-201ENST00000193403 ADAMTSL4-AS1Q5T5F5 129 aa8.28□□□□□ -1.08
ACTN1-201ENST00000193403 DNAL4O96015 105 aa8.28□□□□□ -1.08
ACTN1-201ENST00000193403 LINC00315P59091 139 aa8.28□□□□□ -1.08
ACTN1-201ENST00000193403 ITPR3Q14573 2671 aa8.28□□□□□ -1.08
ACTN1-201ENST00000193403 TMEM101Q96IK0 257 aa8.28□□□□□ -1.08
ACTN1-201ENST00000193403 A0A096LPF7 62 aa8.27□□□□□ -1.08
ACTN1-201ENST00000193403 LGALS9O00182 355 aa8.27□□□□□ -1.08
ACTN1-201ENST00000193403 KIF25-AS1Q9Y6Z4 181 aa8.27□□□□□ -1.08
ACTN1-201ENST00000193403 C9orf153Q5TBE3 101 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms