RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 TNFRSF18Q9Y5U5 241 aa18.85■□□□□ 0.61
RTN4R-201ENST00000043402 NOTCH2Q04721 2471 aa18.84■□□□□ 0.61
RTN4R-201ENST00000043402 LY6G6DO95868 133 aa18.84■□□□□ 0.61
RTN4R-201ENST00000043402 RS1O15537 224 aa18.83■□□□□ 0.61
RTN4R-201ENST00000043402 OTOGQ6ZRI0 2925 aa18.83■□□□□ 0.61
RTN4R-201ENST00000043402 IL17DQ8TAD2 202 aa18.83■□□□□ 0.6
RTN4R-201ENST00000043402 RHODO00212 210 aa18.82■□□□□ 0.6
RTN4R-201ENST00000043402 IGHV3-53P01767 116 aa18.82■□□□□ 0.6
RTN4R-201ENST00000043402 KRTAP10-3P60369 221 aa18.82■□□□□ 0.6
RTN4R-201ENST00000043402 NOTCH3Q9UM47 2321 aa18.82■□□□□ 0.6
RTN4R-201ENST00000043402 GIG44P09565 113 aaPredicted RBP18.82■□□□□ 0.6
RTN4R-201ENST00000043402 RNF151Q2KHN1 245 aa18.82■□□□□ 0.6
RTN4R-201ENST00000043402 C19orf73Q9NVV2 129 aa18.82■□□□□ 0.6
RTN4R-201ENST00000043402 IGLV4-3A0A075B6K6 122 aa18.81■□□□□ 0.6
RTN4R-201ENST00000043402 SAMD5Q5TGI4 173 aa18.81■□□□□ 0.6
RTN4R-201ENST00000043402 FAM104AQ969W3 186 aa18.81■□□□□ 0.6
RTN4R-201ENST00000043402 TAL2Q16559 108 aa18.8■□□□□ 0.6
RTN4R-201ENST00000043402 SPCS1Q9Y6A9 102 aa18.8■□□□□ 0.6
RTN4R-201ENST00000043402 FABP2P12104 132 aa18.79■□□□□ 0.6
RTN4R-201ENST00000043402 TMEM170BQ5T4T1 132 aa18.79■□□□□ 0.6
RTN4R-201ENST00000043402 TRBV7-3A0A075B6L6 115 aa18.78■□□□□ 0.6
RTN4R-201ENST00000043402 ZNF815PA8K554 130 aa18.78■□□□□ 0.6
RTN4R-201ENST00000043402 NFE4Q86UQ8 179 aa18.78■□□□□ 0.6
RTN4R-201ENST00000043402 NHP2Q9NX24 153 aaKnown RBP18.78■□□□□ 0.6
RTN4R-201ENST00000043402 K7ERJ3 54 aa18.78■□□□□ 0.6
RTN4R-201ENST00000043402 PCP4P48539 62 aa18.78■□□□□ 0.6
RTN4R-201ENST00000043402 OR5A1Q8NGJ0 315 aa18.78■□□□□ 0.6
RTN4R-201ENST00000043402 HIST1H4GQ99525 98 aa18.78■□□□□ 0.6
RTN4R-201ENST00000043402 CMC4P56277 68 aaPredicted RBP18.77■□□□□ 0.6
RTN4R-201ENST00000043402 PHLDA1Q8WV24 401 aaPredicted RBP18.77■□□□□ 0.6
RTN4R-201ENST00000043402 TRGV1A0A0A0MS02 117 aa18.76■□□□□ 0.59
RTN4R-201ENST00000043402 HERVK_113P61574 105 aa18.76■□□□□ 0.59
RTN4R-201ENST00000043402 CEMP1Q6PRD7 247 aaPredicted RBP18.76■□□□□ 0.59
RTN4R-201ENST00000043402 PLEKHB2Q96CS7 222 aa18.76■□□□□ 0.59
RTN4R-201ENST00000043402 CHCHD7Q9BUK0 85 aa18.76■□□□□ 0.59
RTN4R-201ENST00000043402 PYGO1Q9Y3Y4 419 aa18.76■□□□□ 0.59
RTN4R-201ENST00000043402 TSPEAR-AS2P59090 65 aa18.76■□□□□ 0.59
RTN4R-201ENST00000043402 FAM110AQ9BQ89 295 aa18.76■□□□□ 0.59
RTN4R-201ENST00000043402 VCX2Q9H322 139 aa18.75■□□□□ 0.59
RTN4R-201ENST00000043402 IGHV3-38A0A0C4DH36 116 aa18.75■□□□□ 0.59
RTN4R-201ENST00000043402 K7ERU9 68 aa18.75■□□□□ 0.59
RTN4R-201ENST00000043402 TMEM263Q8WUH6 116 aaKnown RBP18.75■□□□□ 0.59
RTN4R-201ENST00000043402 DNAJC30Q96LL9 226 aa18.75■□□□□ 0.59
RTN4R-201ENST00000043402 RPL35AP18077 110 aaKnown RBP18.74■□□□□ 0.59
RTN4R-201ENST00000043402 Q6ZTI0 123 aa18.74■□□□□ 0.59
RTN4R-201ENST00000043402 ZNF479Q96JC4 524 aa18.74■□□□□ 0.59
RTN4R-201ENST00000043402 A0A0J9YXV3 536 aa18.72■□□□□ 0.59
RTN4R-201ENST00000043402 AMELXQ99217 191 aa18.72■□□□□ 0.59
RTN4R-201ENST00000043402 NDUFA11Q86Y39 141 aa18.71■□□□□ 0.59
RTN4R-201ENST00000043402 ZNF22P17026 224 aaPredicted RBP18.71■□□□□ 0.59
RTN4R-201ENST00000043402 SCGB1D4Q6XE38 83 aa18.71■□□□□ 0.59
RTN4R-201ENST00000043402 VPS25Q9BRG1 176 aa18.71■□□□□ 0.59
RTN4R-201ENST00000043402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.7■□□□□ 0.58
RTN4R-201ENST00000043402 IGKV2-29A2NJV5 120 aaPredicted RBP18.7■□□□□ 0.58
RTN4R-201ENST00000043402 TMEM223A0PJW6 202 aa18.69■□□□□ 0.58
RTN4R-201ENST00000043402 UBE2D4Q9Y2X8 147 aa18.69■□□□□ 0.58
RTN4R-201ENST00000043402 PLAC8L1A1L4L8 177 aa18.69■□□□□ 0.58
RTN4R-201ENST00000043402 C12orf74Q32Q52 190 aa18.69■□□□□ 0.58
RTN4R-201ENST00000043402 RNASE13Q5GAN3 156 aaKnown RBP18.69■□□□□ 0.58
RTN4R-201ENST00000043402 CSNK1G2-AS1Q8NCQ2 148 aa18.69■□□□□ 0.58
RTN4R-201ENST00000043402 NOP10Q9NPE3 64 aaKnown RBP18.69■□□□□ 0.58
RTN4R-201ENST00000043402 INAFM1C9JVW0 142 aa18.68■□□□□ 0.58
RTN4R-201ENST00000043402 FN1P02751 2386 aaKnown RBP18.68■□□□□ 0.58
RTN4R-201ENST00000043402 C21orf62-AS1Q17RA5 79 aa18.68■□□□□ 0.58
RTN4R-201ENST00000043402 C2CD3Q4AC94 2353 aa18.67■□□□□ 0.58
RTN4R-201ENST00000043402 J3QQQ9 107 aa18.67■□□□□ 0.58
RTN4R-201ENST00000043402 COTL1Q14019 142 aa18.67■□□□□ 0.58
RTN4R-201ENST00000043402 A0A0J9YY99 117 aa18.66■□□□□ 0.58
RTN4R-201ENST00000043402 NSD1Q96L73 2696 aaPredicted RBP18.66■□□□□ 0.58
RTN4R-201ENST00000043402 IGLL5B9A064 214 aa18.66■□□□□ 0.58
RTN4R-201ENST00000043402 CRYBA4P53673 196 aa18.66■□□□□ 0.58
RTN4R-201ENST00000043402 LINC00482Q8N8I6 264 aa18.66■□□□□ 0.58
RTN4R-201ENST00000043402 DAZ2Q13117 558 aaKnown RBP18.65■□□□□ 0.58
RTN4R-201ENST00000043402 PF4P02776 101 aa18.65■□□□□ 0.58
RTN4R-201ENST00000043402 SPANXA1Q9NS26 97 aa18.65■□□□□ 0.58
RTN4R-201ENST00000043402 TRAV4A0A0B4J268 109 aa18.64■□□□□ 0.57
RTN4R-201ENST00000043402 MRPS36P82909 103 aaKnown RBP18.64■□□□□ 0.57
RTN4R-201ENST00000043402 IGHV3-64A0A075B6Q5 118 aa18.64■□□□□ 0.57
RTN4R-201ENST00000043402 LEPROTO15243 131 aa18.63■□□□□ 0.57
RTN4R-201ENST00000043402 C16orf74Q96GX8 76 aa18.63■□□□□ 0.57
RTN4R-201ENST00000043402 VWFP04275 2813 aa18.63■□□□□ 0.57
RTN4R-201ENST00000043402 A0A1B0GWB2 263 aa18.62■□□□□ 0.57
RTN4R-201ENST00000043402 Q6ZUT4 128 aa18.62■□□□□ 0.57
RTN4R-201ENST00000043402 C1QTNF4Q9BXJ3 329 aa18.62■□□□□ 0.57
RTN4R-201ENST00000043402 K7EQD1 137 aa18.62■□□□□ 0.57
RTN4R-201ENST00000043402 SRSF9Q13242 221 aaKnown RBP eCLIP18.62■□□□□ 0.57
RTN4R-201ENST00000043402 LGALS3P17931 250 aaKnown RBP18.61■□□□□ 0.57
RTN4R-201ENST00000043402 SLC25A29Q8N8R3 303 aa18.61■□□□□ 0.57
RTN4R-201ENST00000043402 TRBV10-1A0A0K0K1A3 114 aa18.59■□□□□ 0.57
RTN4R-201ENST00000043402 SPATA3Q8NHX4 192 aa18.59■□□□□ 0.57
RTN4R-201ENST00000043402 G3V4G9 280 aa18.59■□□□□ 0.57
RTN4R-201ENST00000043402 GAGE7O76087 117 aa18.58■□□□□ 0.57
RTN4R-201ENST00000043402 GAGE12FP0CL80 117 aa18.58■□□□□ 0.57
RTN4R-201ENST00000043402 GAGE12GP0CL81 117 aa18.58■□□□□ 0.57
RTN4R-201ENST00000043402 GAGE12IP0CL82 117 aa18.58■□□□□ 0.57
RTN4R-201ENST00000043402 RPL36AP83881 106 aaKnown RBP18.58■□□□□ 0.57
RTN4R-201ENST00000043402 RRN3P1Q2M238 152 aa18.58■□□□□ 0.57
RTN4R-201ENST00000043402 RPL36ALQ969Q0 106 aaKnown RBP18.58■□□□□ 0.57
RTN4R-201ENST00000043402 HIVEP1P15822 2718 aa18.58■□□□□ 0.56
RTN4R-201ENST00000043402 NTM-AS1Q6ZSK4 140 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms