RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CHCHD7Q9BUK0 85 aa10.21□□□□□ -0.77
RTFDC1-201ENST00000023939 JMJD1CQ15652 2540 aa10.21□□□□□ -0.78
RTFDC1-201ENST00000023939 IGLV4-69A0A075B6H9 119 aa10.21□□□□□ -0.78
RTFDC1-201ENST00000023939 COTL1Q14019 142 aa10.21□□□□□ -0.78
RTFDC1-201ENST00000023939 C12orf54Q6X4T0 127 aa10.21□□□□□ -0.78
RTFDC1-201ENST00000023939 PCP2Q8IVA1 136 aa10.21□□□□□ -0.78
RTFDC1-201ENST00000023939 X6R8D5 127 aa10.21□□□□□ -0.78
RTFDC1-201ENST00000023939 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
RTFDC1-201ENST00000023939 APOC4P55056 127 aa10.2□□□□□ -0.78
RTFDC1-201ENST00000023939 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
RTFDC1-201ENST00000023939 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
RTFDC1-201ENST00000023939 SPANXA1Q9NS26 97 aa10.2□□□□□ -0.78
RTFDC1-201ENST00000023939 IGLV4-3A0A075B6K6 122 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 TRGV2A0A075B6R0 118 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 A0A1B0GV90 55 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 GAGE12BA1L429 117 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 GAGE7O76087 117 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 GAGE12FP0CL80 117 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 GAGE12GP0CL81 117 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 GAGE12IP0CL82 117 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 HINT1P49773 126 aaPredicted RBP10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 BATFQ16520 125 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 DAZ4Q86SG3 579 aaKnown RBP10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 DAZ3Q9NR90 486 aaKnown RBP10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 UBE2D3P61077 147 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 UBE2D2P62837 147 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 MPV17L2Q567V2 206 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 ZNRF2Q8NHG8 242 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 AMELXQ99217 191 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
RTFDC1-201ENST00000023939 C11orf86A6NJI1 115 aa10.18□□□□□ -0.78
RTFDC1-201ENST00000023939 E9PLD3 99 aa10.18□□□□□ -0.78
RTFDC1-201ENST00000023939 BVES-AS1Q5T3Y7 98 aa10.18□□□□□ -0.78
RTFDC1-201ENST00000023939 FAM104AQ969W3 186 aa10.18□□□□□ -0.78
RTFDC1-201ENST00000023939 TIMM21Q9BVV7 248 aa10.18□□□□□ -0.78
RTFDC1-201ENST00000023939 ZMAT5Q9UDW3 170 aaKnown RBP10.18□□□□□ -0.78
RTFDC1-201ENST00000023939 TCTAP57738 103 aa10.17□□□□□ -0.78
RTFDC1-201ENST00000023939 TMEM97Q5BJF2 176 aa10.17□□□□□ -0.78
RTFDC1-201ENST00000023939 SHISA2Q6UWI4 295 aa10.17□□□□□ -0.78
RTFDC1-201ENST00000023939 VCX2Q9H322 139 aa10.17□□□□□ -0.78
RTFDC1-201ENST00000023939 UBE2D4Q9Y2X8 147 aa10.17□□□□□ -0.78
RTFDC1-201ENST00000023939 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
RTFDC1-201ENST00000023939 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
RTFDC1-201ENST00000023939 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
RTFDC1-201ENST00000023939 HSD52Q0P140 79 aa10.16□□□□□ -0.78
RTFDC1-201ENST00000023939 FHL2Q14192 279 aa10.16□□□□□ -0.78
RTFDC1-201ENST00000023939 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.78
RTFDC1-201ENST00000023939 OR11H2Q8NH07 326 aa10.15□□□□□ -0.78
RTFDC1-201ENST00000023939 GTSF1LQ9H1H1 148 aa10.15□□□□□ -0.78
RTFDC1-201ENST00000023939 TRGV4A0A0C4DH28 118 aa10.14□□□□□ -0.79
RTFDC1-201ENST00000023939 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
RTFDC1-201ENST00000023939 HERVK_113P61574 105 aa10.14□□□□□ -0.79
RTFDC1-201ENST00000023939 C3orf56Q8N813 242 aa10.14□□□□□ -0.79
RTFDC1-201ENST00000023939 NIPBLQ6KC79 2804 aaeCLIP10.14□□□□□ -0.79
RTFDC1-201ENST00000023939 ATRQ13535 2644 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 TRBV25-1A0A075B6N4 114 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 LINC00694P0DN24 101 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 MAPKAPK5-AS1Q8N8E1 139 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 NOTCH3Q9UM47 2321 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 IGKV2-29A2NJV5 120 aaPredicted RBP10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 GAGE12JA6NER3 117 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 EMP1P54849 157 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 SEC11AP67812 179 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 GAGE1Q13065 139 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 GAGE4Q13068 117 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 GAGE5Q13069 117 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 GAGE13Q4V321 117 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 SBSPONQ8IVN8 264 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 CHAC1Q9BUX1 264 aa10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 CSDC2Q9Y534 153 aaKnown RBP10.13□□□□□ -0.79
RTFDC1-201ENST00000023939 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
RTFDC1-201ENST00000023939 IGHV4-30-4P0DP06 118 aa10.12□□□□□ -0.79
RTFDC1-201ENST00000023939 EGFEM1PQ0D2K5 195 aa10.12□□□□□ -0.79
RTFDC1-201ENST00000023939 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
RTFDC1-201ENST00000023939 PRIMA1Q86XR5 153 aa10.12□□□□□ -0.79
RTFDC1-201ENST00000023939 MYMXA0A1B0GTQ4 84 aa10.11□□□□□ -0.79
RTFDC1-201ENST00000023939 MIFP14174 115 aa10.11□□□□□ -0.79
RTFDC1-201ENST00000023939 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
RTFDC1-201ENST00000023939 DEFB135Q30KP9 77 aa10.11□□□□□ -0.79
RTFDC1-201ENST00000023939 A8MZ25 164 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 H7C423 109 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 RNF183Q96D59 192 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 TMEM223A0PJW6 202 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 DEFB130BP0DP73 79 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 DEFB130AP0DP74 79 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 ZNF22P17026 224 aaPredicted RBP10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 TAL2Q16559 108 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 ORAOV1Q8WV07 137 aa10.1□□□□□ -0.79
RTFDC1-201ENST00000023939 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
RTFDC1-201ENST00000023939 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
RTFDC1-201ENST00000023939 Q6ZUT4 128 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms