RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 YAE1D1Q9NRH1 226 aa12.5□□□□□ -0.41
PHGDH-211ENST00000641213 TMEM141Q96I45 108 aa12.49□□□□□ -0.41
PHGDH-211ENST00000641213 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
PHGDH-211ENST00000641213 TIMM17AQ99595 171 aa12.49□□□□□ -0.41
PHGDH-211ENST00000641213 CUBNO60494 3623 aa12.48□□□□□ -0.41
PHGDH-211ENST00000641213 CCL24O00175 119 aa12.48□□□□□ -0.41
PHGDH-211ENST00000641213 ITPR2Q14571 2701 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 GCSHP23434 173 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 ACANP16112 2415 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 TRAV25A0A0B4J276 109 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 C9orf118A6NHY6 69 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 PMVKQ15126 192 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 RHOHQ15669 191 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 NSUN5P1Q3KNT7 163 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 OR11H2Q8NH07 326 aa12.47□□□□□ -0.41
PHGDH-211ENST00000641213 M0R2P5 195 aa12.46□□□□□ -0.41
PHGDH-211ENST00000641213 FXYD2P54710 66 aa12.46□□□□□ -0.41
PHGDH-211ENST00000641213 ODF3L2Q3SX64 289 aa12.46□□□□□ -0.41
PHGDH-211ENST00000641213 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
PHGDH-211ENST00000641213 CST9LQ9H4G1 147 aa12.46□□□□□ -0.41
PHGDH-211ENST00000641213 EDA2RQ9HAV5 297 aa12.46□□□□□ -0.41
PHGDH-211ENST00000641213 IGHV3-73A0A0B4J1V6 119 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 E9PLD3 99 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 I3L3M4 83 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 K7EP13 123 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 ZNF415Q09FC8 603 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 LINC01006Q8NI28 216 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 LINC01587Q99440 93 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.42
PHGDH-211ENST00000641213 LINC00467Q9BRT7 94 aa12.46□□□□□ -0.42
PHGDH-211ENST00000641213 C11orf86A6NJI1 115 aa12.45□□□□□ -0.42
PHGDH-211ENST00000641213 RNASE1P07998 156 aaKnown RBP12.45□□□□□ -0.42
PHGDH-211ENST00000641213 P0DMU3 169 aa12.45□□□□□ -0.42
PHGDH-211ENST00000641213 FAM231AP0DMU4 169 aa12.45□□□□□ -0.42
PHGDH-211ENST00000641213 FAM231CP0DMU5 169 aa12.45□□□□□ -0.42
PHGDH-211ENST00000641213 UFSP1Q6NVU6 142 aa12.45□□□□□ -0.42
PHGDH-211ENST00000641213 A8MWV9 139 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 INSP01308 110 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 PROK1P58294 105 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 PIK3CD-AS1Q5SR53 167 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 CEND1Q8N111 149 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 CLUHP3Q96NS8 147 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 TM2D2Q9BX73 214 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 C16orf95Q9H693 158 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 MYMXA0A1B0GTQ4 84 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 C11orf72Q8NBR9 251 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 PTH2Q96A98 100 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 RAB37Q96AX2 223 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 PRADC1Q9BSG0 188 aa12.44□□□□□ -0.42
PHGDH-211ENST00000641213 TSSC4Q9Y5U2 329 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-211ENST00000641213 H3BUT2 72 aa12.43□□□□□ -0.42
PHGDH-211ENST00000641213 EMP1P54849 157 aa12.43□□□□□ -0.42
PHGDH-211ENST00000641213 PAPPA-AS1Q5QFB9 102 aa12.43□□□□□ -0.42
PHGDH-211ENST00000641213 HELZ2Q9BYK8 2649 aaKnown RBP12.43□□□□□ -0.42
PHGDH-211ENST00000641213 SMIM13P0DJ93 91 aa12.42□□□□□ -0.42
PHGDH-211ENST00000641213 TAL2Q16559 108 aa12.42□□□□□ -0.42
PHGDH-211ENST00000641213 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
PHGDH-211ENST00000641213 NAA38Q9BRA0 125 aaKnown RBP12.42□□□□□ -0.42
PHGDH-211ENST00000641213 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
PHGDH-211ENST00000641213 OPRPNQ99935 248 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-211ENST00000641213 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
PHGDH-211ENST00000641213 ANK3Q12955 4377 aaKnown RBP12.41□□□□□ -0.42
PHGDH-211ENST00000641213 STHQ8IWL8 128 aa12.41□□□□□ -0.42
PHGDH-211ENST00000641213 SPXQ9BT56 116 aa12.41□□□□□ -0.42
PHGDH-211ENST00000641213 Q6ZSN1 163 aa12.4□□□□□ -0.42
PHGDH-211ENST00000641213 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
PHGDH-211ENST00000641213 HIST1H4GQ99525 98 aa12.39□□□□□ -0.43
PHGDH-211ENST00000641213 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
PHGDH-211ENST00000641213 BEAN1Q3B7T3 259 aa12.39□□□□□ -0.43
PHGDH-211ENST00000641213 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
PHGDH-211ENST00000641213 Q9UF83 564 aa12.39□□□□□ -0.43
PHGDH-211ENST00000641213 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
PHGDH-211ENST00000641213 GAGE10A6NGK3 116 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 AZU1P20160 251 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 PHLDA1Q8WV24 401 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-211ENST00000641213 NHP2Q9NX24 153 aaKnown RBP12.38□□□□□ -0.43
PHGDH-211ENST00000641213 MTORP42345 2549 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 SETD2Q9BYW2 2564 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-211ENST00000641213 UNC79Q9P2D8 2635 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 K7ERJ3 54 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 HERVK_113P61574 105 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 SCGB2A2Q13296 93 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 C1orf158Q8N1D5 194 aa12.38□□□□□ -0.43
PHGDH-211ENST00000641213 A0A1W2PPM0 123 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 RHODO00212 210 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 HILS1P60008 231 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 TMEM170BQ5T4T1 132 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 NFE4Q86UQ8 179 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 ZNF418Q8TF45 676 aaPredicted RBP12.36□□□□□ -0.43
PHGDH-211ENST00000641213 IGLV4-3A0A075B6K6 122 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 RS1O15537 224 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 GTF2H5Q6ZYL4 71 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 PLEKHB2Q96CS7 222 aa12.36□□□□□ -0.43
PHGDH-211ENST00000641213 IGHV3OR16-12A0A075B7B8 117 aa12.35□□□□□ -0.43
PHGDH-211ENST00000641213 SAP30O75446 220 aa12.35□□□□□ -0.43
PHGDH-211ENST00000641213 IGHV3-53P01767 116 aa12.35□□□□□ -0.43
PHGDH-211ENST00000641213 SAMD5Q5TGI4 173 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 230.7 ms