RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 NBASA2RRP1 2371 aa3.45□□□□□ -1.86
RTTN-220ENST00000640654 ATRXP46100 2492 aa3.45□□□□□ -1.86
RTTN-220ENST00000640654 ZFHX4Q86UP3 3567 aa3.45□□□□□ -1.86
RTTN-220ENST00000640654 SPTA1P02549 2419 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 IGF2RP11717 2491 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 SPTBN1Q01082 2364 aaKnown RBP3.44□□□□□ -1.86
RTTN-220ENST00000640654 IGLV4-69A0A075B6H9 119 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 IGHV3-16A0A0C4DH30 117 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 A0A0J9YX75 114 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 TRBV6-5A0A0K0K1A5 114 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 TEX48A0A1B0GUV7 120 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 IGIPA6NJ69 53 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 ZNF815PA8K554 130 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 K7EQG2 157 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 LGALS9O00182 355 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 IGHV4-59P01825 116 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 ZNF688P0C7X2 276 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 COX6B1P14854 86 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 HOXD3P31249 432 aaPredicted RBP3.44□□□□□ -1.86
RTTN-220ENST00000640654 RPL39P62891 51 aaKnown RBP3.44□□□□□ -1.86
RTTN-220ENST00000640654 WFDC2Q14508 124 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 DEFB112Q30KQ8 113 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 SAMD13Q5VXD3 122 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 MORN3Q6PF18 240 aaPredicted RBP3.44□□□□□ -1.86
RTTN-220ENST00000640654 C10orf99Q6UWK7 81 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 FOXI2Q6ZQN5 318 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 KLHL30-AS1Q8NEE0 82 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 SVIPQ8NHG7 77 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 DCANP1Q8TF63 244 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 TMEM141Q96I45 108 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 C9orf85Q96MD7 179 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 ODF3Q96PU9 254 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 SPANXB1Q9NS25 103 aaPredicted RBP3.44□□□□□ -1.86
RTTN-220ENST00000640654 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 CEP295Q9C0D2 2601 aa3.44□□□□□ -1.86
RTTN-220ENST00000640654 ZZEF1O43149 2961 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 SPENQ96T58 3664 aaKnown RBP3.43□□□□□ -1.86
RTTN-220ENST00000640654 TRAV12-2A0A075B6T6 113 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 IGHV1OR15-1A0A075B7D0 117 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 TMEM89A2RUT3 159 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 SDHAF1A6NFY7 115 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 LINC01549A6NIU2 74 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 B4DSR2 109 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 PSMB8P28062 276 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 EMP1P54849 157 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 HERVK_113P61574 105 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 SCGB2A2Q13296 93 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 PMVKQ15126 192 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 PAPPA-AS1Q5QFB9 102 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 AMTNQ6UX39 209 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 KIR2DL4Q99706 377 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 PRO0461Q9UI25 63 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 AKAP6Q13023 2319 aa3.43□□□□□ -1.86
RTTN-220ENST00000640654 A0A0J9YY99 117 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 GAGE12JA6NER3 117 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 F8W1H4 67 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 H3BMG7 143 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 M0QY20 66 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 UBE2D1P51668 147 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 SYNJ2BPP57105 145 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 TSPEAR-AS2P59090 65 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 SRSF9Q13242 221 aaKnown RBP eCLIP3.42□□□□□ -1.86
RTTN-220ENST00000640654 RHOHQ15669 191 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 ZNF56Q15929 161 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 SPINK13Q1W4C9 94 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 SCGB1D4Q6XE38 83 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 SH2D6Q7Z4S9 175 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 TRPT1Q86TN4 253 aaKnown RBP3.42□□□□□ -1.86
RTTN-220ENST00000640654 NRGNQ92686 78 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 TIMM17AQ99595 171 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 OPRPNQ99935 248 aaPredicted RBP3.42□□□□□ -1.86
RTTN-220ENST00000640654 ZNF256Q9Y2P7 627 aaPredicted RBP3.42□□□□□ -1.86
RTTN-220ENST00000640654 DCHS2Q6V1P9 2916 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 MUC3AQ02505 3323 aa3.42□□□□□ -1.86
RTTN-220ENST00000640654 LRBAP50851 2863 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 KNCNA6PVL3 124 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 RHODO00212 210 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 LEPROTO15243 131 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 APOMO95445 188 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 TSPAN13O95857 204 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 P0DMU3 169 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 FAM231AP0DMU4 169 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 FAM231CP0DMU5 169 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 LGALS3P17931 250 aaKnown RBP3.41□□□□□ -1.86
RTTN-220ENST00000640654 PSMB2P49721 201 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 SNRPD3P62318 126 aaKnown RBP3.41□□□□□ -1.86
RTTN-220ENST00000640654 NSUN5P1Q3KNT7 163 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 ZNF876PQ49A33 203 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 TMEM170BQ5T4T1 132 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 FAM74A4Q5TZK3 123 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 NFE4Q86UQ8 179 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 RNF152Q8N8N0 203 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 ZNRF2Q8NHG8 242 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 DUX5Q96PT3 197 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 AMELXQ99217 191 aa3.41□□□□□ -1.86
RTTN-220ENST00000640654 SPAG8Q99932 426 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms