RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 H3BMM0 161 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 MEIG1Q5JSS6 88 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 LCNL1Q6ZST4 164 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 NDUFA11Q86Y39 141 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 ITLN2Q8WWU7 325 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-210ENST00000640652 UBE2WQ96B02 151 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 TEP1Q99973 2627 aaKnown RBP4.23□□□□□ -1.73
SCN3A-210ENST00000640652 A0A096LNJ9 63 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 LEPROTO15243 131 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 GNRH2O43555 120 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 SAP30O75446 220 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 SPINK13Q1W4C9 94 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 TSPAN13O95857 204 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 HOXD3P31249 432 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-210ENST00000640652 GAGE2BQ13066 116 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 GAGE2EQ4V326 116 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 AJUBAQ96IF1 538 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 SPANXB1Q9NS25 103 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-210ENST00000640652 GAGE2DQ9UEU5 116 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 CRYBA4P53673 196 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 SPXQ9BT56 116 aa4.23□□□□□ -1.73
SCN3A-210ENST00000640652 ELANEP08246 267 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 CMC4P56277 68 aaPredicted RBP4.22□□□□□ -1.73
SCN3A-210ENST00000640652 UNQ9165/PRO28630Q6UXU0 137 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 DNAJC30Q96LL9 226 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 C9JAW5 83 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 BRI3O95415 125 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 LGALS1P09382 135 aaKnown RBP4.22□□□□□ -1.73
SCN3A-210ENST00000640652 SYNJ2BPP57105 145 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 TCTEX1D4Q5JR98 221 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 C2orf82Q6UX34 121 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 SLC25A20O43772 301 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 MDFICQ9P1T7 246 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 U3KQE9 123 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 IGHG4P01861 327 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 STHQ8IWL8 128 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 SLC25A29Q8N8R3 303 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 KLK9Q9UKQ9 250 aa4.22□□□□□ -1.73
SCN3A-210ENST00000640652 BSNQ9UPA5 3926 aa4.21□□□□□ -1.73
SCN3A-210ENST00000640652 UNC79Q9P2D8 2635 aa4.21□□□□□ -1.73
SCN3A-210ENST00000640652 KLLNB2CW77 178 aa4.21□□□□□ -1.73
SCN3A-210ENST00000640652 IFITM1P13164 125 aa4.21□□□□□ -1.73
SCN3A-210ENST00000640652 HERVK_113P63121 156 aa4.21□□□□□ -1.73
SCN3A-210ENST00000640652 LMO4P61968 165 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 FOXI1Q12951 378 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 TRBV27A0A0K0K1C4 114 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 GNLYP22749 145 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 C20orf173Q96LM9 149 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV3-73A0A0B4J1V6 119 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 UBE2E2Q96LR5 201 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 NDUFA12Q9UI09 145 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV4OR15-8A0A075B7B6 117 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 A0A087WW49 117 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 INAFM2P0DMQ5 153 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 LGALS9O00182 355 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 RPL36AP83881 106 aaKnown RBP4.21□□□□□ -1.74
SCN3A-210ENST00000640652 RPL36ALQ969Q0 106 aaKnown RBP4.21□□□□□ -1.74
SCN3A-210ENST00000640652 TRBV12-3P01733 135 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 Q8N1Y9 231 aa4.21□□□□□ -1.74
SCN3A-210ENST00000640652 RPL39P62891 51 aaKnown RBP4.2□□□□□ -1.74
SCN3A-210ENST00000640652 WFDC12Q8WWY7 111 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 IGLV2-18A0A075B6J9 118 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 A0A0J9YX75 114 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV4-38-2P0DP08 117 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 C10orf105Q8TEF2 133 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 ZNF580Q9UK33 172 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV3OR16-12A0A075B7B8 117 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 CRIP2P52943 208 aaPredicted RBP4.2□□□□□ -1.74
SCN3A-210ENST00000640652 WFDC2Q14508 124 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 TTTY13Q9BZ97 58 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 A0A0B4J2C4 111 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 NXPH4O95158 308 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 CFC1P0CG37 223 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 SPATA25Q9BR10 227 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 TRGV1A0A0A0MS02 117 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 F6UB75 175 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 TRGV2A0A075B6R0 118 aa4.2□□□□□ -1.74
SCN3A-210ENST00000640652 DCHS1Q96JQ0 3298 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 CRPP02741 224 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV4-61A0A0C4DH41 118 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 SH2D6Q7Z4S9 175 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 KLHL30-AS1Q8NEE0 82 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 IGHV3-16A0A0C4DH30 117 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 ICOSQ9Y6W8 199 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 PIK3CD-AS1Q5SR53 167 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 ANKRD29Q8N6D5 301 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 RBMY1BA6NDE4 496 aaKnown RBP4.19□□□□□ -1.74
SCN3A-210ENST00000640652 RBMY1EA6NEQ0 496 aaKnown RBP4.19□□□□□ -1.74
SCN3A-210ENST00000640652 RBMY1DP0C7P1 496 aaKnown RBP4.19□□□□□ -1.74
SCN3A-210ENST00000640652 RBMY1A1P0DJD3 496 aaKnown RBP4.19□□□□□ -1.74
SCN3A-210ENST00000640652 RBMY1CP0DJD4 496 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 P0DMU3 169 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 FAM231AP0DMU4 169 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 FAM231CP0DMU5 169 aa4.19□□□□□ -1.74
SCN3A-210ENST00000640652 DAZ2Q13117 558 aaKnown RBP4.19□□□□□ -1.74
SCN3A-210ENST00000640652 DAZ4Q86SG3 579 aaKnown RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms