RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 FAM231AP0DMU4 169 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 FAM231CP0DMU5 169 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 ZNF876PQ49A33 203 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 CHD6Q8TD26 2715 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 M0QY20 66 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 CFC1P0CG37 223 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
HNRNPU-228ENST00000640306 TRBV27A0A0K0K1C4 114 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 ADARB2-AS1A8MUL3 147 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 DEFB112Q30KQ8 113 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 FBN2P35556 2912 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 TRBV7-9A0A0J9YWB2 115 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 A0A0J9YX75 114 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 SCGB1C2P0DMR2 95 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 CFHR3Q02985 330 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 TMEM141Q96I45 108 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 TIMM17AQ99595 171 aa12.25□□□□□ -0.45
HNRNPU-228ENST00000640306 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 LGALS9O00182 355 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 TCL1BO95988 128 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 IGHV3-30P01768 117 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 IGHV3-30-5P0DP03 117 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 PROK1P58294 105 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 SYT8Q8NBV8 401 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 TRAV2A0A0B4J234 112 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 SNRPD3P62318 126 aaKnown RBP12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 PAPPA-AS1Q5QFB9 102 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 TLN2Q9Y4G6 2542 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 PSMB8P28062 276 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 FOXI1Q12951 378 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 CEMP1Q6PRD7 247 aaPredicted RBP12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 C9orf85Q96MD7 179 aa12.24□□□□□ -0.45
HNRNPU-228ENST00000640306 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
HNRNPU-228ENST00000640306 KNCNA6PVL3 124 aa12.23□□□□□ -0.45
HNRNPU-228ENST00000640306 NACAE9PAV3 2078 aa12.23□□□□□ -0.45
HNRNPU-228ENST00000640306 ANKRD17O75179 2603 aaKnown RBP12.22□□□□□ -0.45
HNRNPU-228ENST00000640306 K7EMT4 169 aa12.22□□□□□ -0.45
HNRNPU-228ENST00000640306 SLC25A29Q8N8R3 303 aa12.22□□□□□ -0.45
HNRNPU-228ENST00000640306 AMELXQ99217 191 aa12.22□□□□□ -0.45
HNRNPU-228ENST00000640306 SPATA25Q9BR10 227 aa12.22□□□□□ -0.45
HNRNPU-228ENST00000640306 C1QTNF4Q9BXJ3 329 aa12.22□□□□□ -0.45
HNRNPU-228ENST00000640306 Q9UF83 564 aa12.22□□□□□ -0.45
HNRNPU-228ENST00000640306 A4D1N5 150 aa12.21□□□□□ -0.45
HNRNPU-228ENST00000640306 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.45
HNRNPU-228ENST00000640306 UBE2D3P61077 147 aa12.21□□□□□ -0.45
HNRNPU-228ENST00000640306 UBE2D2P62837 147 aa12.21□□□□□ -0.45
HNRNPU-228ENST00000640306 BRI3O95415 125 aa12.21□□□□□ -0.46
HNRNPU-228ENST00000640306 DEFB136Q30KP8 78 aa12.21□□□□□ -0.46
HNRNPU-228ENST00000640306 SPXQ9BT56 116 aa12.21□□□□□ -0.46
HNRNPU-228ENST00000640306 PTPN13Q12923 2485 aa12.2□□□□□ -0.46
HNRNPU-228ENST00000640306 FHL3Q13643 280 aa12.2□□□□□ -0.46
HNRNPU-228ENST00000640306 ABCA12Q86UK0 2595 aa12.2□□□□□ -0.46
HNRNPU-228ENST00000640306 K7EQG2 157 aa12.2□□□□□ -0.46
HNRNPU-228ENST00000640306 TRBV6-5A0A0K0K1A5 114 aa12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 RBMY1A1P0DJD3 496 aaKnown RBP12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 RBMY1CP0DJD4 496 aa12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 RBMY1FQ15415 496 aaKnown RBP12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 TRPT1Q86TN4 253 aaKnown RBP12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 C10orf126Q8N4M7 172 aa12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 VCX2Q9H322 139 aa12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 B4DSR2 109 aa12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 ZNF22P17026 224 aaPredicted RBP12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 C20orf203Q8NBC4 194 aa12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 PRO1854Q9UHT4 67 aa12.19□□□□□ -0.46
HNRNPU-228ENST00000640306 EIF4EBP3O60516 100 aaPredicted RBP12.18□□□□□ -0.46
HNRNPU-228ENST00000640306 BEX4Q9NWD9 120 aaPredicted RBP12.18□□□□□ -0.46
HNRNPU-228ENST00000640306 C2CD3Q4AC94 2353 aa12.18□□□□□ -0.46
HNRNPU-228ENST00000640306 IGLV4-3A0A075B6K6 122 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 TMEM223A0PJW6 202 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 C18orf65Q6ZTR6 163 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 MUSTN1Q8IVN3 82 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 CARD19Q96LW7 228 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 DUX3Q96PT4 197 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 TRAV8-3A0A0A6YYJ7 113 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 I3L3M4 83 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 RHODO00212 210 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 NPC2P61916 151 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 A8MZ25 164 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 HOXD3P31249 432 aaPredicted RBP12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 Q1RN00 199 aa12.17□□□□□ -0.46
HNRNPU-228ENST00000640306 CD28P10747 220 aa12.16□□□□□ -0.46
HNRNPU-228ENST00000640306 NSUN5P1Q3KNT7 163 aa12.16□□□□□ -0.46
HNRNPU-228ENST00000640306 CDIP1Q9H305 208 aa12.16□□□□□ -0.46
HNRNPU-228ENST00000640306 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
HNRNPU-228ENST00000640306 MT-ATP8P03928 68 aa12.15□□□□□ -0.46
HNRNPU-228ENST00000640306 PRSS2P07478 247 aa12.15□□□□□ -0.46
HNRNPU-228ENST00000640306 NBPF19A0A087WUL8 3843 aa12.15□□□□□ -0.46
HNRNPU-228ENST00000640306 SONP18583 2426 aaKnown RBP12.15□□□□□ -0.46
HNRNPU-228ENST00000640306 LEPROTO15243 131 aa12.15□□□□□ -0.46
HNRNPU-228ENST00000640306 DEFB131AP59861 70 aa12.15□□□□□ -0.46
HNRNPU-228ENST00000640306 RHOHQ15669 191 aa12.15□□□□□ -0.46
HNRNPU-228ENST00000640306 ANKRD29Q8N6D5 301 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms