RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ARPINQ7Z6K5 226 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 SERP2Q8N6R1 65 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 Q8N814 137 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 Q8N8P6 123 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 CYP4F30PQ9H0H9 118 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 MRPL35Q9NZE8 188 aaKnown RBP1□□□□□ -2.25
CCDC7-216ENST00000640058 PSME4Q14997 1843 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 SCN11AQ9UI33 1791 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 ARHGEF28Q8N1W1 1705 aaKnown RBP1□□□□□ -2.25
CCDC7-216ENST00000640058 ABCA3Q99758 1704 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 PEAK1Q9H792 1746 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 MARF1Q9Y4F3 1742 aaKnown RBP1□□□□□ -2.25
CCDC7-216ENST00000640058 COL4A5P29400 1685 aa1□□□□□ -2.25
CCDC7-216ENST00000640058 ZC3H13Q5T200 1668 aaKnown RBP1□□□□□ -2.25
CCDC7-216ENST00000640058 ABCA10Q8WWZ4 1543 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 TNRC6AQ8NDV7 1962 aaKnown RBP0.99□□□□□ -2.25
CCDC7-216ENST00000640058 PXDNQ92626 1479 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 MYH8P13535 1937 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 ABCC5O15440 1437 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 EDC4Q6P2E9 1401 aaKnown RBP0.99□□□□□ -2.25
CCDC7-216ENST00000640058 CASKIN1Q8WXD9 1431 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 MYO5AQ9Y4I1 1855 aaKnown RBP0.99□□□□□ -2.25
CCDC7-216ENST00000640058 PPLO60437 1756 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 RGPD4Q7Z3J3 1758 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 IGKV2D-26A0A0A0MRZ7 120 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 TRAV13-2A0A0B4J235 113 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 TRAV10A0A0B4J240 114 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 TRAV1-1A0A0B4J248 108 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 IGKV3D-7A0A0C4DH55 119 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 IGKV3OR2-268A0A0C4DH90 116 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 TCRBV4S1A1TA0A5B7 111 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 A6NN06 94 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 E7EUB6 86 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 C5orf67F2Z3F1 127 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 H3BUT2 72 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 ASAH2BP0C7U1 165 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 SMIM13P0DJ93 91 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 DSCR4P56555 118 aaPredicted RBP0.99□□□□□ -2.25
CCDC7-216ENST00000640058 TDRG1Q3Y452 100 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 ETDBQ3ZM63 59 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 Q5BKY6 102 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 C9orf116Q5BN46 136 aaPredicted RBP0.99□□□□□ -2.25
CCDC7-216ENST00000640058 BVES-AS1Q5T3Y7 98 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 Q6ZQT0 140 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 CYP2G1PQ6ZSU1 146 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 ZNF826PQ6ZT77 177 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 SMIM5Q71RC9 77 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 LINC00269Q8N2A0 174 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 SPTSSBQ8NFR3 76 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 C4orf3Q8WVX3 66 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 C20orf78Q9BR46 151 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 MANBALQ9NQG1 85 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 NDUFA12Q9UI09 145 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 KIF21AQ7Z4S6 1674 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 CC2D2AQ9P2K1 1620 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 MYH1P12882 1939 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 MAGI3Q5TCQ9 1506 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 ABCC2Q92887 1545 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 DUOX2Q9NRD8 1548 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 UGGT2Q9NYU1 1516 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 DOCK1Q14185 1865 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 ATP10BO94823 1461 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 IQSEC2Q5JU85 1478 aa0.99□□□□□ -2.25
CCDC7-216ENST00000640058 BLMP54132 1417 aaPredicted RBP0.98□□□□□ -2.25
CCDC7-216ENST00000640058 LRRIQ1Q96JM4 1722 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 SCN8AQ9UQD0 1980 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 MROH1Q8NDA8 1641 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 MAP3K4Q9Y6R4 1608 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 MYLKQ15746 1914 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 IGKV1D-42A0A075B6H8 117 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 TRAV23DV6A0A075B6W5 121 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 A0A087WWC5 75 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 UMAD1C9J7I0 102 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 SYS1-DBNDD2H3BUS1 97 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 CCL16O15467 120 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 BCE1O60756 84 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 CCKP06307 115 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 COX6CP09669 75 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 CXCL8P10145 99 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 RNASE3P12724 160 aaKnown RBP0.98□□□□□ -2.25
CCDC7-216ENST00000640058 ROMO1P60602 79 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 NMSQ5H8A3 153 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 PSMG4Q5JS54 123 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 C1orf134Q5TEV5 83 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 HEPN1Q6WQI6 88 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 Q8IYB0 196 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 DYNLRB1Q9NP97 96 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 FRMPD1Q5SYB0 1578 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 LAMC3Q9Y6N6 1575 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 EPRSP07814 1512 aaKnown RBP0.98□□□□□ -2.25
CCDC7-216ENST00000640058 ABCC1P33527 1531 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 PARP14Q460N5 1801 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 SBF2Q86WG5 1849 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 RGPD3A6NKT7 1758 aaPredicted RBP0.98□□□□□ -2.25
CCDC7-216ENST00000640058 GOLGA3Q08378 1498 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 NCOA2Q15596 1464 aa0.98□□□□□ -2.25
CCDC7-216ENST00000640058 CDK12Q9NYV4 1490 aaPredicted RBP0.98□□□□□ -2.25
CCDC7-216ENST00000640058 CHD3Q12873 2000 aaKnown RBP0.98□□□□□ -2.25
CCDC7-216ENST00000640058 TANC2Q9HCD6 1990 aa0.97□□□□□ -2.25
CCDC7-216ENST00000640058 TOPAZ1Q8N9V7 1692 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms