RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 P0DMU3 169 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 FAM231AP0DMU4 169 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 FAM231CP0DMU5 169 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 NAV2Q8IVL1 2488 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 TRBV27A0A0K0K1C4 114 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 TSPAN13O95857 204 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 PSMB2P49721 201 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 SMAGPQ0VAQ4 97 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 DEFB136Q30KP8 78 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 ZNF580Q9UK33 172 aa13.23□□□□□ -0.29
CROCCP2-204ENST00000639456 LGALS9O00182 355 aa13.22□□□□□ -0.29
CROCCP2-204ENST00000639456 PROK1P58294 105 aa13.22□□□□□ -0.29
CROCCP2-204ENST00000639456 ZNF418Q8TF45 676 aaPredicted RBP13.22□□□□□ -0.29
CROCCP2-204ENST00000639456 IGHV1OR15-1A0A075B7D0 117 aa13.21□□□□□ -0.29
CROCCP2-204ENST00000639456 LINC01619G3V211 115 aa13.21□□□□□ -0.29
CROCCP2-204ENST00000639456 AZU1P20160 251 aa13.21□□□□□ -0.29
CROCCP2-204ENST00000639456 HERVK_113P61574 105 aa13.21□□□□□ -0.29
CROCCP2-204ENST00000639456 Q9UF83 564 aa13.21□□□□□ -0.29
CROCCP2-204ENST00000639456 K7EQG2 157 aa13.21□□□□□ -0.3
CROCCP2-204ENST00000639456 UBE2D1P51668 147 aa13.21□□□□□ -0.3
CROCCP2-204ENST00000639456 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.3
CROCCP2-204ENST00000639456 PTH2Q96A98 100 aa13.21□□□□□ -0.3
CROCCP2-204ENST00000639456 KNCNA6PVL3 124 aa13.2□□□□□ -0.3
CROCCP2-204ENST00000639456 RBMY1A1P0DJD3 496 aaKnown RBP13.2□□□□□ -0.3
CROCCP2-204ENST00000639456 RBMY1CP0DJD4 496 aa13.2□□□□□ -0.3
CROCCP2-204ENST00000639456 RBMY1FQ15415 496 aaKnown RBP13.2□□□□□ -0.3
CROCCP2-204ENST00000639456 RNASE13Q5GAN3 156 aaKnown RBP13.2□□□□□ -0.3
CROCCP2-204ENST00000639456 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
CROCCP2-204ENST00000639456 C2CD3Q4AC94 2353 aa13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 TMEM238LA0A1B0GVL6 79 aa13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 A6NJY4 79 aa13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 SMCPP49901 116 aaPredicted RBP13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 CEMP1Q6PRD7 247 aaPredicted RBP13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 DUX3Q96PT4 197 aa13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 GAGE12HA6NDE8 117 aa13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 J3QQQ9 107 aa13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 TMEM141Q96I45 108 aa13.19□□□□□ -0.3
CROCCP2-204ENST00000639456 RPL32P62910 135 aaKnown RBP13.18□□□□□ -0.3
CROCCP2-204ENST00000639456 NDUFA11Q86Y39 141 aa13.18□□□□□ -0.3
CROCCP2-204ENST00000639456 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
CROCCP2-204ENST00000639456 CFC1BP0CG36 223 aa13.18□□□□□ -0.3
CROCCP2-204ENST00000639456 CFC1P0CG37 223 aa13.18□□□□□ -0.3
CROCCP2-204ENST00000639456 BEX4Q9NWD9 120 aaPredicted RBP13.18□□□□□ -0.3
CROCCP2-204ENST00000639456 A0A0J9YXV3 536 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 ADARB2-AS1A8MUL3 147 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 IGHV3-30P01768 117 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 IGHV3-30-5P0DP03 117 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 SAMD13Q5VXD3 122 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 AMELXQ99217 191 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 H7C2G1 150 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 PAPPA-AS1Q5QFB9 102 aa13.17□□□□□ -0.3
CROCCP2-204ENST00000639456 PRRC2AP48634 2157 aaKnown RBP13.16□□□□□ -0.3
CROCCP2-204ENST00000639456 LGALS3P17931 250 aaKnown RBP13.16□□□□□ -0.3
CROCCP2-204ENST00000639456 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
CROCCP2-204ENST00000639456 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
CROCCP2-204ENST00000639456 SLURP1P55000 103 aa13.16□□□□□ -0.3
CROCCP2-204ENST00000639456 RAX2Q96IS3 184 aa13.16□□□□□ -0.3
CROCCP2-204ENST00000639456 SLC25A29Q8N8R3 303 aa13.15□□□□□ -0.3
CROCCP2-204ENST00000639456 SIGMAR1Q99720 223 aa13.15□□□□□ -0.3
CROCCP2-204ENST00000639456 CCDC168Q8NDH2 2452 aa13.15□□□□□ -0.3
CROCCP2-204ENST00000639456 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
CROCCP2-204ENST00000639456 CFAP126Q5VTH2 177 aa13.15□□□□□ -0.3
CROCCP2-204ENST00000639456 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
CROCCP2-204ENST00000639456 NFE4Q86UQ8 179 aa13.15□□□□□ -0.3
CROCCP2-204ENST00000639456 JMJD1CQ15652 2540 aa13.14□□□□□ -0.31
CROCCP2-204ENST00000639456 DEFB131AP59861 70 aa13.14□□□□□ -0.31
CROCCP2-204ENST00000639456 C20orf203Q8NBC4 194 aa13.14□□□□□ -0.31
CROCCP2-204ENST00000639456 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
CROCCP2-204ENST00000639456 TCL1BO95988 128 aa13.14□□□□□ -0.31
CROCCP2-204ENST00000639456 SPXQ9BT56 116 aa13.14□□□□□ -0.31
CROCCP2-204ENST00000639456 NBPF19A0A087WUL8 3843 aa13.13□□□□□ -0.31
CROCCP2-204ENST00000639456 J3QR89 54 aa13.13□□□□□ -0.31
CROCCP2-204ENST00000639456 LINC01356Q8N9X3 169 aa13.13□□□□□ -0.31
CROCCP2-204ENST00000639456 IGLV4-3A0A075B6K6 122 aa13.12□□□□□ -0.31
CROCCP2-204ENST00000639456 I3L3M4 83 aa13.12□□□□□ -0.31
CROCCP2-204ENST00000639456 ZNF22P17026 224 aaPredicted RBP13.12□□□□□ -0.31
CROCCP2-204ENST00000639456 NSUN5P1Q3KNT7 163 aa13.12□□□□□ -0.31
CROCCP2-204ENST00000639456 A4D1N5 150 aa13.12□□□□□ -0.31
CROCCP2-204ENST00000639456 VCX2Q9H322 139 aa13.12□□□□□ -0.31
CROCCP2-204ENST00000639456 TMEM223A0PJW6 202 aa13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 EIF4EBP3O60516 100 aaPredicted RBP13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 PRB1P04280 392 aa13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 SCGB1C2P0DMR2 95 aa13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 UBE2D3P61077 147 aa13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 UBE2D2P62837 147 aa13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 ODF3Q96PU9 254 aa13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 TRAV8-3A0A0A6YYJ7 113 aa13.11□□□□□ -0.31
CROCCP2-204ENST00000639456 A8MZ25 164 aa13.1□□□□□ -0.31
CROCCP2-204ENST00000639456 RHODO00212 210 aa13.1□□□□□ -0.31
CROCCP2-204ENST00000639456 FOXI1Q12951 378 aa13.1□□□□□ -0.31
CROCCP2-204ENST00000639456 KHDC1LQ5JSQ8 128 aa13.1□□□□□ -0.31
CROCCP2-204ENST00000639456 Q6ZSN1 163 aa13.1□□□□□ -0.31
CROCCP2-204ENST00000639456 ZNF702PQ9H963 129 aa13.1□□□□□ -0.31
CROCCP2-204ENST00000639456 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
CROCCP2-204ENST00000639456 RBMY1BA6NDE4 496 aaKnown RBP13.09□□□□□ -0.31
CROCCP2-204ENST00000639456 RBMY1EA6NEQ0 496 aaKnown RBP13.09□□□□□ -0.31
CROCCP2-204ENST00000639456 RBMY1DP0C7P1 496 aaKnown RBP13.09□□□□□ -0.31
CROCCP2-204ENST00000639456 C10orf126Q8N4M7 172 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms