RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 DEFB136Q30KP8 78 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 CCSMST1Q4G0I0 132 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 C9orf116Q5BN46 136 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 LELP1Q5T871 98 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 LYRM7Q5U5X0 104 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 FKBP1CQ5VVH2 108 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 RPL7L1Q6DKI1 246 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 OR2T2Q6IF00 324 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 FAM151BQ6UXP7 276 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 Q6ZUT4 128 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SLC25A26Q70HW3 274 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 BAGE2Q86Y30 109 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 FAM223AQ8IWN6 122 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 DEFB106AQ8N104 65 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 STX19Q8N4C7 294 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM86BQ8N661 226 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 OR51A4Q8NGJ6 313 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 NEK7Q8TDX7 302 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PPDPFLQ8WWR9 84 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 RAB8BQ92930 207 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 DIRC1Q969H9 104 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 IFI27L1Q96BM0 104 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 DCUN1D1Q96GG9 259 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TEX37Q96LM6 180 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PHB2Q99623 299 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 OR2J1Q9GZK6 312 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM126AQ9H061 195 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM133Q9H2Q1 129 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PARVBQ9HBI1 364 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PRTFDC1Q9NRG1 225 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 UQCC1Q9NVA1 299 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 PSENENQ9NZ42 101 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 METTL1Q9UBP6 276 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 SMPXQ9UHP9 88 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 MPC1Q9Y5U8 109 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM56-RWDD3S4R434 201 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 V9GYH0 126 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 HLA-DRB4X5D2U9 266 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 CASZ1Q86V15 1759 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 KIDINS220Q9ULH0 1771 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 MYOM3Q5VTT5 1437 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 FGD6Q6ZV73 1430 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 TRAPPC8Q9Y2L5 1435 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 RANBP2P49792 3224 aaKnown RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 USP34Q70CQ2 3546 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 OBSL1O75147 1896 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 NUP155O75694 1391 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 IBTKQ9P2D0 1353 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 HMGXB3Q12766 1538 aa-0.33□□□□□ -2.46
CCDC7-211ENST00000638889 WDFY3Q8IZQ1 3526 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MRC1P22897 1456 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 ABCC10Q5T3U5 1492 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CCDC141Q6ZP82 1450 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MAGI2Q86UL8 1455 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 FYCO1Q9BQS8 1478 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RIMBP3CA6NJZ7 1639 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RIMBP3BA6NNM3 1639 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PAPPAQ13219 1627 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CICQ96RK0 1608 aaPredicted RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RIMBP3Q9UFD9 1639 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 SPEGQ15772 3267 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 IGLV5-48A0A075B6I7 105 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TRBV7-3A0A075B6L6 115 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 hCG_1818297A0A087WSY0 165 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TRAV26-2A0A0B4J265 109 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 IGHV1-24A0A0C4DH33 117 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 SPTY2D1-AS1A0A0U1RR47 76 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CXorf51AA0A1B0GTR3 108 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PNMA8CA0A1B0GUJ8 204 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 FAM236AA0A1B0GUQ0 79 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 FAM236BA0A1B0GV22 79 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MAP1LC3B2A6NCE7 125 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 A6NIN4 97 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 A8MTW9 85 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 F8WEM9 126 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 H3BQV1 296 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 K7EP13 123 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 K7ERJ3 54 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 PGRMC1O00264 195 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TAX1BP3O14907 124 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 UQCR11O14957 56 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 HIST1H2BKO60814 126 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 GGCTO75223 188 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 NIPSNAP2O75323 286 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CST7O76096 145 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 APOEP02649 317 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 TTRP02766 147 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 MT-ATP8P03928 68 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 HIST1H2BJP06899 126 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CXCL1P09341 107 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 OCM2P0CE71 109 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 FABP2P12104 132 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 HIST1H1DP16402 221 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 ADCYAP1P18509 176 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 NFYBP25208 207 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 RPS12P25398 132 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CLIP1P30622 1438 aa-0.34□□□□□ -2.46
CCDC7-211ENST00000638889 CKS2P33552 79 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms