RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
SCARB2-209ENST00000638409 FAM223AQ8IWN6 122 aa5.51□□□□□ -1.53
SCARB2-209ENST00000638409 ATOH7Q8N100 152 aa5.51□□□□□ -1.53
SCARB2-209ENST00000638409 ZNF331Q9NQX6 463 aaPredicted RBP5.51□□□□□ -1.53
SCARB2-209ENST00000638409 TNCP24821 2201 aa5.51□□□□□ -1.53
SCARB2-209ENST00000638409 GPX1P07203 203 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 GNG4P50150 75 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 SYNJ2BPP57105 145 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 Q0VG73 95 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 FAM19A2Q8N3H0 131 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 ZNF586Q9NXT0 402 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 CMYA5Q8N3K9 4069 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 IGLV11-55A0A075B6I3 123 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 ISLRO14498 428 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 OR7C2O60412 319 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 TRGV3P03979 118 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 GATA2P23769 480 aaPredicted RBP5.5□□□□□ -1.53
SCARB2-209ENST00000638409 SRIP30626 198 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 TMEM78Q5T7P6 136 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 TMEM136Q6ZRR5 245 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 TXNDC17Q9BRA2 123 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 TRAV9-1A0A075B6T8 112 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 C9JCJ5 164 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 APELAP0DMC3 54 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 MGST1P10620 155 aaKnown RBP5.5□□□□□ -1.53
SCARB2-209ENST00000638409 NTF3P20783 257 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 NPY1RP25929 384 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 ANAPC13Q9BS18 74 aa5.5□□□□□ -1.53
SCARB2-209ENST00000638409 MRPS16Q9Y3D3 137 aaKnown RBP5.5□□□□□ -1.53
SCARB2-209ENST00000638409 TRRAPQ9Y4A5 3859 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 BMPR1BO00238 502 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 LGALS1P09382 135 aaKnown RBP5.49□□□□□ -1.53
SCARB2-209ENST00000638409 ERHP84090 104 aaKnown RBP5.49□□□□□ -1.53
SCARB2-209ENST00000638409 SCGB1D4Q6XE38 83 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 C18orf65Q6ZTR6 163 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 DEFB125Q8N687 156 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 KLHL30-AS1Q8NEE0 82 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 BORCS7Q96B45 105 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 NPVFQ9HCQ7 196 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 IGLV8-61A0A075B6I0 122 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 PGPA6NDG6 321 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 GGTLC3B5MD39 225 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 LINC00869P0C866 280 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 C3orf79P0CE67 100 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 ERCC8Q13216 396 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 AMMECR1LQ6DCA0 310 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 WFDC9Q8NEX5 89 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 GTSF1Q8WW33 167 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 ZNF355PQ9NSJ1 428 aa5.49□□□□□ -1.53
SCARB2-209ENST00000638409 OR2T8A6NH00 312 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 TAX1BP3O14907 124 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 IGLV2-8P01709 118 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 DAD1P61803 113 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 ATP5G2Q06055 141 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 ZNF876PQ49A33 203 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 Q8N1X5 172 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 TP73-AS1Q9UF72 201 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 TRBV7-1A0A0A6YYK4 115 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 ZNF324O75467 553 aaPredicted RBP5.48□□□□□ -1.53
SCARB2-209ENST00000638409 C15orf32Q32M92 178 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 FER1L6-AS1Q8NA97 138 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 TSKUQ8WUA8 353 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 LY96Q9Y6Y9 160 aa5.48□□□□□ -1.53
SCARB2-209ENST00000638409 IGKV1OR2-108A0A075B7D4 117 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 TRAV5A0A0B4J249 113 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 RNASE2P10153 161 aaKnown RBP5.47□□□□□ -1.53
SCARB2-209ENST00000638409 LINC00479Q96M42 142 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 TIMM17AQ99595 171 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 SOCS3O14543 225 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 APCSP02743 223 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 AZU1P20160 251 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 DAZ2Q13117 558 aaKnown RBP5.47□□□□□ -1.53
SCARB2-209ENST00000638409 C2orf83Q53S99 150 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 IBA57Q5T440 356 aaKnown RBP5.47□□□□□ -1.53
SCARB2-209ENST00000638409 GOLT1AQ6ZVE7 132 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 DAZ4Q86SG3 579 aaKnown RBP5.47□□□□□ -1.53
SCARB2-209ENST00000638409 IGF2BP2-AS1Q96M15 143 aa5.47□□□□□ -1.53
SCARB2-209ENST00000638409 DAZ1Q9NQZ3 744 aaKnown RBP5.47□□□□□ -1.53
SCARB2-209ENST00000638409 DAZ3Q9NR90 486 aaKnown RBP5.47□□□□□ -1.53
SCARB2-209ENST00000638409 VWFP04275 2813 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 I3L2K1 104 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 K7EIM0 57 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 COX7A2P2O60397 106 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 MT-ND6P03923 174 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 CKS1BP61024 79 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 GDF5OSQ5U4N7 250 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 OSTCQ9NRP0 149 aa5.46□□□□□ -1.53
SCARB2-209ENST00000638409 SMIM27A0A1W2PRY6 76 aa5.46□□□□□ -1.54
SCARB2-209ENST00000638409 IGHV3-11P01762 117 aa5.46□□□□□ -1.54
SCARB2-209ENST00000638409 MP68P56378 58 aa5.46□□□□□ -1.54
SCARB2-209ENST00000638409 SPATA12Q7Z6I5 190 aa5.46□□□□□ -1.54
SCARB2-209ENST00000638409 C18orf32Q8TCD1 76 aa5.46□□□□□ -1.54
SCARB2-209ENST00000638409 TMEM167BQ9NRX6 74 aa5.46□□□□□ -1.54
SCARB2-209ENST00000638409 HLA-DQA1P01909 254 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 ORM2P19652 201 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 PSG9Q00887 426 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 DEFB136Q30KP8 78 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 Q56UQ5 140 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 C2orf66Q6UXQ4 117 aa5.45□□□□□ -1.54
SCARB2-209ENST00000638409 C5orf17Q8NAS9 161 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms