RNA–Protein interactions for RNA: ENST00000638134.1

CLCN2-222, Transcript of chloride voltage-gated channel 2, human

TSL 5

Gene CLCN2, Length 2,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLCN2-222	ENST00000638134	MALRD1	Q5VYJ5	2156 aa		11.84	□□□□□ -0.51
CLCN2-222	ENST00000638134	IGLV11-55	A0A075B6I3	123 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	TRAV25	A0A0B4J276	109 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	IGIP	A6NJ69	53 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	C17orf100	A8MU93	164 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134		F8W735	103 aa	Predicted RBP	11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	TRIAP1	O43715	76 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	TSHB	P01222	138 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	HERVK_113	P63121	156 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	C11orf71	Q6IPW1	123 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134		A0A0J9YX75	114 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	RPL39L	Q96EH5	51 aa	Known RBP	11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	TIMM17A	Q99595	171 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	AGPAT4-IT1	Q9H0P7	198 aa		11.83	□□□□□ -0.52
CLCN2-222	ENST00000638134	TRGV11	A0A075B6L2	103 aa		11.82	□□□□□ -0.52
CLCN2-222	ENST00000638134	BUB1B-PAK6	H3BSN5	160 aa		11.82	□□□□□ -0.52
CLCN2-222	ENST00000638134	LEPROT	O15243	131 aa		11.82	□□□□□ -0.52
CLCN2-222	ENST00000638134	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.82	□□□□□ -0.52
CLCN2-222	ENST00000638134	MUSTN1	Q8IVN3	82 aa		11.82	□□□□□ -0.52
CLCN2-222	ENST00000638134	C14orf178	Q8N769	122 aa	Predicted RBP	11.82	□□□□□ -0.52
CLCN2-222	ENST00000638134	OR13C6P	Q8NH95	151 aa		11.82	□□□□□ -0.52
CLCN2-222	ENST00000638134	LYNX1	G3V0Z9	82 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	COX6C	P09669	75 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	LYNX1	P0DP58	116 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	MRPL53	Q96EL3	112 aa	Known RBP	11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	METTL26	Q96S19	204 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	SDHAF1	A6NFY7	115 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	TMEM178B	H3BS89	294 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	DLX1	P56177	255 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	ZNF876P	Q49A33	203 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	TMEM219	Q86XT9	240 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	FANCD2OS	Q96PS1	177 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	CITED2	Q99967	270 aa	Predicted RBP	11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	MED13L	Q71F56	2210 aa		11.81	□□□□□ -0.52
CLCN2-222	ENST00000638134	LOC107984640	A0A0U1RRK4	108 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	OOSP1	A8MZH6	123 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	KAAG1	Q9UBP8	84 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134		S4R3C0	116 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	PDZD2	O15018	2839 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	SETX	Q7Z333	2677 aa	Known RBP	11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	AKAP9	Q99996	3911 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	TMEM223	A0PJW6	202 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	LYPD2	Q6UXB3	125 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	TP53TG1	Q9Y2A0	90 aa		11.8	□□□□□ -0.52
CLCN2-222	ENST00000638134	C9orf47	Q6ZRZ4	202 aa		11.79	□□□□□ -0.52
CLCN2-222	ENST00000638134	ZNRF2	Q8NHG8	242 aa		11.79	□□□□□ -0.52
CLCN2-222	ENST00000638134	DUX3	Q96PT4	197 aa		11.79	□□□□□ -0.52
CLCN2-222	ENST00000638134	ICOS	Q9Y6W8	199 aa		11.79	□□□□□ -0.52
CLCN2-222	ENST00000638134	BEX4	Q9NWD9	120 aa	Predicted RBP	11.78	□□□□□ -0.52
CLCN2-222	ENST00000638134	MED14OS	P0DP75	135 aa		11.78	□□□□□ -0.52
CLCN2-222	ENST00000638134	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.78	□□□□□ -0.52
CLCN2-222	ENST00000638134	LINC00643	Q86TS7	51 aa		11.78	□□□□□ -0.52
CLCN2-222	ENST00000638134	CCL19	Q99731	98 aa		11.78	□□□□□ -0.52
CLCN2-222	ENST00000638134	CELSR1	Q9NYQ6	3014 aa		11.78	□□□□□ -0.52
CLCN2-222	ENST00000638134	GPHB5	Q86YW7	130 aa		11.77	□□□□□ -0.52
CLCN2-222	ENST00000638134	RNF182	Q8N6D2	247 aa		11.77	□□□□□ -0.52
CLCN2-222	ENST00000638134	CCL17	Q92583	94 aa		11.77	□□□□□ -0.52
CLCN2-222	ENST00000638134	LENEP	Q9Y5L5	61 aa		11.77	□□□□□ -0.52
CLCN2-222	ENST00000638134	ZAN	Q9Y493	2812 aa		11.77	□□□□□ -0.53
CLCN2-222	ENST00000638134	LST1	O00453	97 aa		11.77	□□□□□ -0.53
CLCN2-222	ENST00000638134	NBR2	O15453	112 aa		11.77	□□□□□ -0.53
CLCN2-222	ENST00000638134	CTSG	P08311	255 aa		11.77	□□□□□ -0.53
CLCN2-222	ENST00000638134	CRYGA	P11844	174 aa		11.76	□□□□□ -0.53
CLCN2-222	ENST00000638134	CXCL5	P42830	114 aa		11.76	□□□□□ -0.53
CLCN2-222	ENST00000638134	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.76	□□□□□ -0.53
CLCN2-222	ENST00000638134	COX7C	P15954	63 aa		11.75	□□□□□ -0.53
CLCN2-222	ENST00000638134	IGHV4OR15-8	A0A075B7B6	117 aa		11.75	□□□□□ -0.53
CLCN2-222	ENST00000638134		A0A087WW49	117 aa		11.75	□□□□□ -0.53
CLCN2-222	ENST00000638134	BUB3	O43684	328 aa		11.75	□□□□□ -0.53
CLCN2-222	ENST00000638134	MGP	P08493	103 aa		11.75	□□□□□ -0.53
CLCN2-222	ENST00000638134	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.75	□□□□□ -0.53
CLCN2-222	ENST00000638134	NPB	Q8NG41	125 aa		11.75	□□□□□ -0.53
CLCN2-222	ENST00000638134	LY6L	H3BQJ8	138 aa		11.74	□□□□□ -0.53
CLCN2-222	ENST00000638134	ZNF22	P17026	224 aa	Predicted RBP	11.74	□□□□□ -0.53
CLCN2-222	ENST00000638134	LINC00527	Q9UJ94	153 aa		11.74	□□□□□ -0.53
CLCN2-222	ENST00000638134	ZFAND3	Q9H8U3	227 aa		11.74	□□□□□ -0.53
CLCN2-222	ENST00000638134	PHLDA3	Q9Y5J5	127 aa		11.74	□□□□□ -0.53
CLCN2-222	ENST00000638134	IGHV1-69	P01742	117 aa		11.73	□□□□□ -0.53
CLCN2-222	ENST00000638134	UBE2E1	P51965	193 aa		11.73	□□□□□ -0.53
CLCN2-222	ENST00000638134	GAGE2A	Q6NT46	116 aa		11.73	□□□□□ -0.53
CLCN2-222	ENST00000638134	SDIM1	Q6ZPB5	146 aa		11.73	□□□□□ -0.53
CLCN2-222	ENST00000638134	VCY	O14598	125 aa		11.72	□□□□□ -0.53
CLCN2-222	ENST00000638134	PF4V1	P10720	104 aa		11.72	□□□□□ -0.53
CLCN2-222	ENST00000638134	POLR2K	P53803	58 aa	Known RBP	11.72	□□□□□ -0.53
CLCN2-222	ENST00000638134	ZFHX3	Q15911	3703 aa		11.72	□□□□□ -0.53
CLCN2-222	ENST00000638134		A0A0J9YXY3	114 aa		11.72	□□□□□ -0.53
CLCN2-222	ENST00000638134	S100A4	P26447	101 aa	Known RBP	11.72	□□□□□ -0.53
CLCN2-222	ENST00000638134	PRRC2A	P48634	2157 aa	Known RBP	11.71	□□□□□ -0.53
CLCN2-222	ENST00000638134	C5orf38	Q86SI9	138 aa		11.71	□□□□□ -0.53
CLCN2-222	ENST00000638134	MYO9A	B2RTY4	2548 aa		11.71	□□□□□ -0.54
CLCN2-222	ENST00000638134	RPL39	P62891	51 aa	Known RBP	11.71	□□□□□ -0.54
CLCN2-222	ENST00000638134	ARHGAP32	A7KAX9	2087 aa		11.7	□□□□□ -0.54
CLCN2-222	ENST00000638134	TRAV21	A0A0B4J279	112 aa		11.7	□□□□□ -0.54
CLCN2-222	ENST00000638134	ITPR3	Q14573	2671 aa		11.7	□□□□□ -0.54
CLCN2-222	ENST00000638134	TEX15	Q9BXT5	2789 aa		11.7	□□□□□ -0.54
CLCN2-222	ENST00000638134	IGHV3-23	P01764	117 aa		11.69	□□□□□ -0.54
CLCN2-222	ENST00000638134	LITAF	Q99732	161 aa		11.69	□□□□□ -0.54
CLCN2-222	ENST00000638134	NXPH4	O95158	308 aa		11.69	□□□□□ -0.54
CLCN2-222	ENST00000638134	PRR9	Q5T870	116 aa		11.69	□□□□□ -0.54
CLCN2-222	ENST00000638134	DCANP1	Q8TF63	244 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 47 ms